Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0273
         (614 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK123126-1|BAC85538.1|  170|Homo sapiens protein ( Homo sapiens ...    37   0.049
AY681966-1|AAV87216.1| 2069|Homo sapiens citron protein.               30   5.6  
AY257469-1|AAP13528.1| 2027|Homo sapiens rho/rac-interacting cit...    30   5.6  
AC002563-2|AAB71327.1| 1286|Homo sapiens WUGSC:H_127H14.1 protein.     30   5.6  
AB023166-1|BAA76793.2| 1559|Homo sapiens KIAA0949 protein protein.     30   5.6  
BC094780-1|AAH94780.1|  320|Homo sapiens VGLL3 protein protein.        30   7.5  
D21846-1|BAA04873.1|   84|Homo sapiens T cell receptor beta chai...    29   9.9  

>AK123126-1|BAC85538.1|  170|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41131 fis, clone BRACE2024627. ).
          Length = 170

 Score = 37.1 bits (82), Expect = 0.049
 Identities = 25/79 (31%), Positives = 33/79 (41%)
 Frame = -3

Query: 435 LLAKELELDHSRALSKSRLSSWLGVXGVAGLAAPPVTLRAVQSRXQGHQDHHRGPAPRHS 256
           L+  + + +H     K   + W G   V GL     TLR +  R    Q   R PA  H 
Sbjct: 76  LIPYDEDFNHEPCQRKGHKAHWAGSCWVFGLCPVSATLRTLSCRACSTQCWAR-PANHHP 134

Query: 255 GNTRRPKPTELSACCRERS 199
              R P+  ELS CC  R+
Sbjct: 135 CQRRAPR--ELSTCCPSRA 151


>AY681966-1|AAV87216.1| 2069|Homo sapiens citron protein.
          Length = 2069

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = -3

Query: 288  DHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHHF 133
            +HHRGP+   S   +R  PT      +  + +P     PS P     +PH +
Sbjct: 1951 EHHRGPSTSRSSPNKRGPPTYNEHITKRVASSPAPPEGPSHP-REPSTPHRY 2001


>AY257469-1|AAP13528.1| 2027|Homo sapiens rho/rac-interacting citron
            kinase protein.
          Length = 2027

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = -3

Query: 288  DHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHHF 133
            +HHRGP+   S   +R  PT      +  + +P     PS P     +PH +
Sbjct: 1909 EHHRGPSTSRSSPNKRGPPTYNEHITKRVASSPAPPEGPSHP-REPSTPHRY 1959


>AC002563-2|AAB71327.1| 1286|Homo sapiens WUGSC:H_127H14.1 protein.
          Length = 1286

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = -3

Query: 288  DHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHHF 133
            +HHRGP+   S   +R  PT      +  + +P     PS P     +PH +
Sbjct: 1168 EHHRGPSTSRSSPNKRGPPTYNEHITKRVASSPAPPEGPSHP-REPSTPHRY 1218


>AB023166-1|BAA76793.2| 1559|Homo sapiens KIAA0949 protein protein.
          Length = 1559

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -3

Query: 288  DHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHHF 133
            +HHRGP+   S N R P PT      +  + +P     PS P     +PH +
Sbjct: 1442 EHHRGPSTSRSPNKRGP-PTYNEHITKRVASSPAPPEGPSHP-REPSTPHRY 1491


>BC094780-1|AAH94780.1|  320|Homo sapiens VGLL3 protein protein.
          Length = 320

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
 Frame = -3

Query: 345 LAAPPVTLRAVQ-SRXQGHQDHHRGPAPRHSGNTRRPKP--TELSACCRERSETPRHRNK 175
           +  PP T  A   S   GH  H  GPAP  + +   P P  +++S       +     + 
Sbjct: 172 VTGPPGTFSAADPSPWPGHNLHQTGPAPPPAVSESWPYPLTSQVSPSYSHMHDVYMRHHH 231

Query: 174 PSRPVWSRRSPHHFH 130
           P   +  R   HH H
Sbjct: 232 PHAHMHHRHRHHHHH 246


>D21846-1|BAA04873.1|   84|Homo sapiens T cell receptor beta chain
           protein.
          Length = 84

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 213 SKRSALSASDAECFRCAWAPGLCGGP 290
           SKR  LS  D+  + CAW+ GL GGP
Sbjct: 22  SKRLLLS--DSGFYLCAWSAGLAGGP 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,708,029
Number of Sequences: 237096
Number of extensions: 1588445
Number of successful extensions: 5595
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5577
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)