Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0272
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   5.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   5.8  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 513 YFCDFVFTYFECFRSFFMKFNYFM 584
           ++  F   YF+ +  FF+ F +F+
Sbjct: 144 FYKQFAIEYFQMYVLFFVNFAFFV 167


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 513 YFCDFVFTYFECFRSFFMKFNYFM 584
           ++  F   YF+ +  FF+ F +F+
Sbjct: 144 FYKQFAIEYFQMYVLFFVNFAFFV 167


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 118 TNKVYT*MTGEFHFN 74
           TNK  T +  EFHFN
Sbjct: 261 TNKQLTELEKEFHFN 275


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 118 TNKVYT*MTGEFHFN 74
           TNK  T +  EFHFN
Sbjct: 50  TNKQLTELEKEFHFN 64


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 118 TNKVYT*MTGEFHFN 74
           TNK  T +  EFHFN
Sbjct: 50  TNKQLTELEKEFHFN 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,259
Number of Sequences: 336
Number of extensions: 2921
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)