Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0270
(748 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 59 4e-09
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 56 2e-08
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 54 9e-08
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 53 2e-07
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 53 2e-07
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 52 7e-07
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 7e-07
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 48 6e-06
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 36 0.026
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_38057| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_45121| Best HMM Match : rve (HMM E-Value=3.8e-09) 29 4.0
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 28 7.0
SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16) 28 9.2
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +1
Query: 271 DKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAA 447
D DKFQ+ LDV+ F PEEI+ K +G I V + S++F R Y LPEG
Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEEG-FDSKEFRRCYNLPEGVD 60
Query: 448 PETVESRLSSDGVLTITAPRRYPTPSRESE 537
++ +R++ DG+L + A ++ P + E++
Sbjct: 61 ESSISTRIAEDGMLHVEALKKSPPATTENK 90
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/80 (36%), Positives = 39/80 (48%)
Frame = +1
Query: 271 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 450
D KF + LDV F PEE+ VK G+ + + +RQF R + LP
Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVY-GHELSVRARQECEEHGFFTARQFNRHFVLPREVDM 154
Query: 451 ETVESRLSSDGVLTITAPRR 510
+T+ RL DGVL I A +R
Sbjct: 155 DTLVPRLGKDGVLYIEADKR 174
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +1
Query: 268 ADKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 444
A K+ ++ LDV+ + PEEIS K +G + V + ++F R + LPEG
Sbjct: 2 AKKNTLEIAKLDVKEYRPEEISFKVENGVVKVQGRHVNEGEFGFEL-KEFRRTFTLPEGI 60
Query: 445 APETVESRLSSDGVLTITAPRRYPTPSRESER 540
PE V SR+S+ G L I A + P P E E+
Sbjct: 61 DPENVTSRISNHGHLHIEARKALPKPEAELEK 92
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +1
Query: 265 KADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 444
KA +DKF + +DV F PE I V+ ++V Y + F R++ LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLV-NANHEVEHEGHYHAMHFNRQFVLPREV 150
Query: 445 APETVESRLSSDGVLTITAPR 507
+++ +RL +G L A +
Sbjct: 151 DMDSLTTRLDKEGKLHFEAKK 171
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 54.4 bits (125), Expect = 9e-08
Identities = 34/102 (33%), Positives = 51/102 (50%)
Frame = +1
Query: 229 TRGCIS*PRSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISR 408
TR C + ++ DK + LDV+++ PEEIS+K G I + Y +
Sbjct: 24 TRNCSLAANTEMEGDKVEI-ATLDVKNYRPEEISLKVEHGRIKIDGKHKSEGEHG-YETS 81
Query: 409 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRRYPTPSRES 534
+F R Y LP+G TV SR++ DG+L I A + P + S
Sbjct: 82 EFHRSYNLPDGVDVSTVSSRITGDGLLHIEALKAEPQETEVS 123
Score = 28.7 bits (61), Expect(2) = 0.099
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 418 RRYALPEGAAPETVESRLSSDGVLTITAPR-RYPTP 522
R + LP+ +++ SRL DG L I A R +PTP
Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYIEAKRILHPTP 196
Score = 24.6 bits (51), Expect(2) = 0.099
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 265 KADKDKFQVNLDVQHFSPE 321
K D +F V LDV FSP+
Sbjct: 137 KIDDKRFTVTLDVSSFSPD 155
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +1
Query: 268 ADKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 444
A+++K ++ LDV+ + PEEIS K +G++ V + ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFEL-KEFRRTFALPEGV 60
Query: 445 APETVESRLSSDGVLTITAPRRYPTPSRESE 537
V++R+S+ G L I A + P P E
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEE 91
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +1
Query: 277 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 456
DKF + +DV F P+ I V+ ++V Y + F R++ LP ++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLV-SANHEVEHEGHYHAMHFNRQFVLPREVDMDS 155
Query: 457 VESRLSSDGVLTITAPRR 510
+ +RL +G L A +R
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +1
Query: 268 ADKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 444
A+++K ++ LDV+ + PEEIS K +G++ V + ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFEL-KEFRRTFALPEGV 60
Query: 445 APETVESRLSSDGVLTITAPRRYPTPSRESE 537
V++R+S+ G L I A + P P E
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEE 91
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +1
Query: 277 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 456
DKF + +DV F P+ I V+ ++V Y + F R++ LP ++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLV-SANHEVEHEGHYHAMHFNRQFVLPREVDMDS 155
Query: 457 VESRLSSDGVLTITAPRR 510
+ +RL +G L A +R
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 51.6 bits (118), Expect = 7e-07
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 268 ADKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 444
A+++K ++ LDV+ + PEEIS K +G++ V + ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFEL-KEFRRTFTLPEGV 60
Query: 445 APETVESRLSSDGVLTITAPRRYPTPSRESE 537
V++R+S+ G L I A + P P E
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEE 91
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 277 DKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 453
D+ ++ LDV+ + PEEIS K +G++ V + ++F R + LPEG
Sbjct: 239 DELEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFEL-KEFRRTFTLPEGVEAS 297
Query: 454 TVESRLSSDGVLTITAPRRYPTPSRESE 537
V++R+S+ G L I A + P P E
Sbjct: 298 NVKTRISNHGQLHIEAMKALPGPDGGEE 325
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +1
Query: 277 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 456
DKF + +DV F P+ I V+ ++V Y + F R++ LP ++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLV-SANHEVEHEGHYHAMHFNRQFVLPREVDMDS 155
Query: 457 VESRLSSDGVLTITAPRR 510
+ +RL +G L A +R
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +1
Query: 277 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 456
DKF + +DV F P+ I V+ ++V Y + F R++ LP ++
Sbjct: 331 DKFSMAMDVTGFPPDSIKVQVLGNELLV-SANHEVEHEGHYHAMHFNRQFVLPREVDMDS 389
Query: 457 VESRLSSDGVLTITAPRR 510
+ +RL +G L A +R
Sbjct: 390 LTTRLDKEGKLHFEAKKR 407
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 51.6 bits (118), Expect = 7e-07
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 268 ADKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 444
A+++K ++ LDV+ + PEEIS K +G++ V + ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFEL-KEFRRTFTLPEGV 60
Query: 445 APETVESRLSSDGVLTITAPRRYPTPSRESE 537
V++R+S+ G L I A + P P E
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEE 91
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +1
Query: 277 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 456
DKF + +DV F P+ I V+ ++V Y + F R++ LP ++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLV-SANHEVEHEGHYHAMHFNRQFVLPREVDMDS 155
Query: 457 VESRLSSDGVLTITAPRR 510
+ +RL +G L A +R
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 271 DKDKFQV-NLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAA 447
+++K ++ LDV+ + PEEIS K +G + V + ++F R + LPEG
Sbjct: 4 NENKLEIAKLDVREYRPEEISFKVENGVVKVQGRHVNEGPFGFEL-KEFRRTFTLPEGVE 62
Query: 448 PETVESRLSSDGVLTITAPRRYPTP 522
V++R+S+ G L I A + P P
Sbjct: 63 ASNVKTRISNHGQLHIEAMKALPEP 87
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 250 PRSSIKADKD-KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 426
P + K KD KF + +DV+ F PE I V+ ++V Y + F R++
Sbjct: 87 PDGAKKESKDDKFSMAMDVKGFPPEAIKVQVLGNELLV-SANHEVEHEGHYHAMHFNRQF 145
Query: 427 ALPEGAAPETVESRLSSDGVLTITAPRR 510
LP +++ +RL +G L A +R
Sbjct: 146 ILPREVDMDSLTTRLDKEGKLHFEAKKR 173
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 36.3 bits (80), Expect = 0.026
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +1
Query: 253 RSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYAL 432
+S+ D KF + LDV F PEE+ VK G+ + + +RQF R + L
Sbjct: 18 QSAATKDDTKFTLALDVSDFKPEEVDVKVY-GHELSVRARQECEEHGFFTARQFNRHFVL 76
Query: 433 PE 438
P+
Sbjct: 77 PQ 78
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 244 RCSRELSPWSEVVFGEHWTGDGSQHVVR 161
R SR SP + FG TGDG QH+V+
Sbjct: 100 RASRTPSPSDSIDFGAVETGDGLQHLVK 127
>SB_38057| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +3
Query: 165 TTCWLPSPVQCSPKTTSDHGDNSRL---HLVTSFQHKGRQGQVPSQSGRAALL 314
TT LPSP + T H D L HL T+ QH+ + + P R LL
Sbjct: 112 TTPTLPSPNNTNTTITQQHHDQPHLHYHHLTTTSQHQAYRYRRPRGGARYQLL 164
>SB_45121| Best HMM Match : rve (HMM E-Value=3.8e-09)
Length = 1111
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 507 EVPDAVKGE-RKVPIAQTGPVRKEI 578
E PD KGE RKVP+A P++ EI
Sbjct: 296 EFPDVFKGEVRKVPLAVREPLKNEI 320
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 28.3 bits (60), Expect = 7.0
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 456 CGIATVIRRGSHHHRAEE 509
CG++ ++RRG +HH EE
Sbjct: 23 CGVSRILRRGYNHHLNEE 40
>SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16)
Length = 411
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 114 TGPVVLLIKILDWR*PRTTCWLPSPVQCSPKTTSDH 221
TG + + L+ PR +C P PV SP+ + H
Sbjct: 253 TGEIEMKDLTLEIPTPRESCQFPGPVSVSPRVATTH 288
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,579,393
Number of Sequences: 59808
Number of extensions: 502982
Number of successful extensions: 1569
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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