Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0270
         (748 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g46230.1 68416.m05004 17.4 kDa class I heat shock protein (HS...    33   0.20 
At2g29500.1 68415.m03583 17.6 kDa class I small heat shock prote...    33   0.20 
At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein (HS...    33   0.27 
At1g53540.1 68414.m06074 17.6 kDa class I small heat shock prote...    32   0.35 
At4g21870.1 68417.m03163 26.5 kDa class P-related heat shock pro...    31   0.81 
At4g14830.1 68417.m02280 expressed protein                             29   3.3  
At4g25434.1 68417.m03661 MutT/nudix family protein similar to SP...    29   4.3  
At1g66720.1 68414.m07584 S-adenosyl-L-methionine:carboxyl methyl...    28   5.7  

>At3g46230.1 68416.m05004 17.4 kDa class I heat shock protein
           (HSP17.4-CI) identical to 17.4 kDa class I heat shock
           protein SP:P19036 from [Arabidopsis thaliana]
          Length = 156

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 15/35 (42%), Positives = 25/35 (71%)
 Frame = +1

Query: 403 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 507
           S +F+RR+ LPE A  E V++ +  +GVL++T P+
Sbjct: 108 SGKFMRRFRLPENAKVEEVKASM-ENGVLSVTVPK 141


>At2g29500.1 68415.m03583 17.6 kDa class I small heat shock protein
           (HSP17.6B-CI) contains Pfam PF00011: Hsp20/alpha
           crystallin family; identified in Scharf, K-D., et al,
           Cell Stress & Chaperones (2001) 6: 225-237.
          Length = 153

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +1

Query: 403 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 507
           S QF RR+ LPE    + V++ +  +GVLT+T P+
Sbjct: 105 SGQFTRRFRLPENVKMDQVKAAM-ENGVLTVTVPK 138


>At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein
           (HSP18.1-CI) identical to 18.2 kDa class I heat shock
           protein (HSP 18.2) (SP:P19037)[Arabidopsis thaliana];
           contains Pfam profile: PF00011 Hsp20/alpha crystallin
           family
          Length = 161

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = +1

Query: 403 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 507
           S +F+RR+ LPE A  E V++ +  +GVLT+  P+
Sbjct: 111 SGKFMRRFRLPENAKMEEVKATM-ENGVLTVVVPK 144


>At1g53540.1 68414.m06074 17.6 kDa class I small heat shock protein
           (HSP17.6C-CI) (AA 1-156) identical to (17.6 kDa class I
           heat shock protein (HSP 17.6) (AA 1-156)(SP:P13853)
           (GI:4376161) (Arabidopsis thaliana) (Nucleic Acids Res.
           17 (19), 7995 (1989))
          Length = 157

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +1

Query: 403 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 507
           S +F RR+ LPE A  E +++ +  +GVL++T P+
Sbjct: 109 SGKFTRRFRLPENAKMEEIKASM-ENGVLSVTVPK 142


>At4g21870.1 68417.m03163 26.5 kDa class P-related heat shock
           protein (HSP26.5-P) contains Pfam profile: PF00011
           Hsp20/alpha crystallin family: identified in Scharf,
           K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237.
          Length = 134

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 20/81 (24%), Positives = 33/81 (40%)
 Frame = +1

Query: 277 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 456
           D    ++D+     EEI V+  D   ++               + F R++ LPE      
Sbjct: 35  DSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFRLPESIDMIG 94

Query: 457 VESRLSSDGVLTITAPRRYPT 519
           + +    DGVLT+  P+R  T
Sbjct: 95  ISAGYE-DGVLTVIVPKRIMT 114


>At4g14830.1 68417.m02280 expressed protein
          Length = 152

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 415 VRRYALPEGAAPETVESRLSSDGVLTITAPR 507
           V R+ LPE   PE V      DG L +T P+
Sbjct: 109 VWRFRLPESTRPELVTVDCDGDGELIVTVPK 139


>At4g25434.1 68417.m03661 MutT/nudix family protein similar to
           SP|P53370 Nucleoside diphosphate-linked moiety X motif 6
           {Homo sapiens}; contains Pfam profile PF00293: NUDIX
           domain
          Length = 304

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 652 EQIKMHHCKPPYLFSASWVPSLWSLISL 569
           E  + HH +P YL    W+P   S I L
Sbjct: 80  EGFRYHHAEPTYLMLVYWIPEAESTIPL 107


>At1g66720.1 68414.m07584 S-adenosyl-L-methionine:carboxyl
           methyltransferase family protein similar to
           defense-related protein cjs1 [Brassica
           carinata][GI:14009292][Mol Plant Pathol (2001)
           2(3):159-169]
          Length = 352

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 413 SSDVTRCLKARRLRLWNRDCHQTGFS 490
           +S + + +  R   LWNRD H TGF+
Sbjct: 151 TSKIPKGISDRNSPLWNRDMHCTGFN 176


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,281,670
Number of Sequences: 28952
Number of extensions: 342027
Number of successful extensions: 976
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)