Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0269
         (396 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089523-1|AAL90261.1|  143|Drosophila melanogaster GM14585p pro...    85   2e-17
AE013599-1845|AAF58277.2|  143|Drosophila melanogaster CG8415-PA...    85   2e-17
M19494-1|AAA28935.1|  140|Drosophila melanogaster protein ( D.me...    39   0.003
BT015958-1|AAV36843.1|  140|Drosophila melanogaster RH56553p pro...    39   0.003
AL133505-2|CAB65841.1|  140|Drosophila melanogaster EG:BACH59J11...    39   0.003
AL133505-1|CAB63528.1|  154|Drosophila melanogaster EG:BACH59J11...    39   0.003
AE014298-399|AAF45781.1|  140|Drosophila melanogaster CG7925-PB ...    39   0.003
AJ250320-1|CAB65721.1|  140|Drosophila melanogaster technical kn...    36   0.019
BT003270-1|AAO25027.1|  926|Drosophila melanogaster LD20211p pro...    27   9.0  
AY069361-1|AAL39506.1|  513|Drosophila melanogaster LD06532p pro...    27   9.0  
AE014296-66|AAF47366.1|  926|Drosophila melanogaster CG7008-PA p...    27   9.0  

>AY089523-1|AAL90261.1|  143|Drosophila melanogaster GM14585p
           protein.
          Length = 143

 Score = 85.4 bits (202), Expect = 2e-17
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = -2

Query: 383 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHXEENDEVLV 255
           KQPNSAIRKCVRVQLIKNGKK+TAFVPRDG LN+ EENDEVLV
Sbjct: 60  KQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLV 102



 Score = 84.2 bits (199), Expect = 6e-17
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = -1

Query: 255 AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERXRS 133
           AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKER RS
Sbjct: 103 AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143


>AE013599-1845|AAF58277.2|  143|Drosophila melanogaster CG8415-PA
           protein.
          Length = 143

 Score = 85.4 bits (202), Expect = 2e-17
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = -2

Query: 383 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHXEENDEVLV 255
           KQPNSAIRKCVRVQLIKNGKK+TAFVPRDG LN+ EENDEVLV
Sbjct: 60  KQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLV 102



 Score = 84.2 bits (199), Expect = 6e-17
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = -1

Query: 255 AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERXRS 133
           AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKER RS
Sbjct: 103 AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143


>M19494-1|AAA28935.1|  140|Drosophila melanogaster protein (
           D.melanogaster tko (technical knockout) locus mRNA
           encoding tko gene product,complete cds. ).
          Length = 140

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 23/56 (41%), Positives = 36/56 (64%)
 Frame = -2

Query: 389 KLKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHXEENDEVLVRDSVVKVTPSV 222
           K K+PNSA RKCV V+L   GK++ A++P  G  ++ +E++ VL R   ++  P V
Sbjct: 69  KPKKPNSANRKCVLVRL-STGKEMVAYIP--GIGHNLQEHNIVLCRVGRLQDVPGV 121


>BT015958-1|AAV36843.1|  140|Drosophila melanogaster RH56553p
           protein.
          Length = 140

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 23/56 (41%), Positives = 36/56 (64%)
 Frame = -2

Query: 389 KLKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHXEENDEVLVRDSVVKVTPSV 222
           K K+PNSA RKCV V+L   GK++ A++P  G  ++ +E++ VL R   ++  P V
Sbjct: 69  KPKKPNSANRKCVLVRL-STGKEMVAYIP--GIGHNLQEHNIVLCRVGRLQDVPGV 121


>AL133505-2|CAB65841.1|  140|Drosophila melanogaster
           EG:BACH59J11.1,FBgn0003714;tko protein.
          Length = 140

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 23/56 (41%), Positives = 36/56 (64%)
 Frame = -2

Query: 389 KLKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHXEENDEVLVRDSVVKVTPSV 222
           K K+PNSA RKCV V+L   GK++ A++P  G  ++ +E++ VL R   ++  P V
Sbjct: 69  KPKKPNSANRKCVLVRL-STGKEMVAYIP--GIGHNLQEHNIVLCRVGRLQDVPGV 121


>AL133505-1|CAB63528.1|  154|Drosophila melanogaster
           EG:BACH59J11.1,FBgn0003714;tko protein.
          Length = 154

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 23/56 (41%), Positives = 36/56 (64%)
 Frame = -2

Query: 389 KLKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHXEENDEVLVRDSVVKVTPSV 222
           K K+PNSA RKCV V+L   GK++ A++P  G  ++ +E++ VL R   ++  P V
Sbjct: 83  KPKKPNSANRKCVLVRL-STGKEMVAYIP--GIGHNLQEHNIVLCRVGRLQDVPGV 135


>AE014298-399|AAF45781.1|  140|Drosophila melanogaster CG7925-PB
           protein.
          Length = 140

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 23/56 (41%), Positives = 36/56 (64%)
 Frame = -2

Query: 389 KLKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHXEENDEVLVRDSVVKVTPSV 222
           K K+PNSA RKCV V+L   GK++ A++P  G  ++ +E++ VL R   ++  P V
Sbjct: 69  KPKKPNSANRKCVLVRL-STGKEMVAYIP--GIGHNLQEHNIVLCRVGRLQDVPGV 121


>AJ250320-1|CAB65721.1|  140|Drosophila melanogaster technical
           knockout protein protein.
          Length = 140

 Score = 35.9 bits (79), Expect = 0.019
 Identities = 22/56 (39%), Positives = 35/56 (62%)
 Frame = -2

Query: 389 KLKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHXEENDEVLVRDSVVKVTPSV 222
           K K+PNSA RKCV V+    GK++ A++P  G  ++ +E++ VL R   ++  P V
Sbjct: 69  KPKKPNSANRKCVLVR-HSTGKEMVAYIP--GIGHNLQEHNIVLCRVGRLQDVPGV 121


>BT003270-1|AAO25027.1|  926|Drosophila melanogaster LD20211p
           protein.
          Length = 926

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 368 AIRKCVRVQLIKNGKKVTAFVPRDGCL 288
           A+R    V+ + +G ++  FVP+D CL
Sbjct: 534 ALRTEAIVEFVASGSRLRIFVPKDSCL 560


>AY069361-1|AAL39506.1|  513|Drosophila melanogaster LD06532p
           protein.
          Length = 513

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 368 AIRKCVRVQLIKNGKKVTAFVPRDGCL 288
           A+R    V+ + +G ++  FVP+D CL
Sbjct: 121 ALRTEAIVEFVASGSRLRIFVPKDSCL 147


>AE014296-66|AAF47366.1|  926|Drosophila melanogaster CG7008-PA
           protein.
          Length = 926

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 368 AIRKCVRVQLIKNGKKVTAFVPRDGCL 288
           A+R    V+ + +G ++  FVP+D CL
Sbjct: 534 ALRTEAIVEFVASGSRLRIFVPKDSCL 560


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,116,488
Number of Sequences: 53049
Number of extensions: 262352
Number of successful extensions: 739
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)