Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0266
         (877 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1; Planta...    38   0.44 
UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma j...    37   0.58 
UniRef50_Q0FE17 Cluster: CAAX amino terminal protease family pro...    37   0.77 
UniRef50_Q55G70 Cluster: Putative uncharacterized protein; n=1; ...    36   1.8  
UniRef50_Q16XG9 Cluster: Putative uncharacterized protein; n=1; ...    35   2.4  
UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila m...    35   3.1  
UniRef50_Q589S4 Cluster: HMG protein TCF/LEF; n=1; Dugesia japon...    34   4.1  
UniRef50_A6S8U0 Cluster: Putative uncharacterized protein; n=2; ...    33   7.2  
UniRef50_Q4SWZ1 Cluster: Chromosome undetermined SCAF13295, whol...    33   9.5  
UniRef50_A6RVJ8 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1;
          Plantago major|Rep: Plasma memebrane H+-ATPase -
          Plantago major (Common plantain)
          Length = 106

 Score = 37.5 bits (83), Expect = 0.44
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +2

Query: 29 LELVDPPGCRNSARGGSV 82
          LELVDPPGCRNSARG  +
Sbjct: 11 LELVDPPGCRNSARGPGI 28


>UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma
          japonicum|Rep: SJCHGC09205 protein - Schistosoma
          japonicum (Blood fluke)
          Length = 215

 Score = 37.1 bits (82), Expect = 0.58
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +2

Query: 29 LELVDPPGCRNSARG 73
          LELVDPPGCRNSARG
Sbjct: 11 LELVDPPGCRNSARG 25


>UniRef50_Q0FE17 Cluster: CAAX amino terminal protease family
           protein; n=1; alpha proteobacterium HTCC2255|Rep: CAAX
           amino terminal protease family protein - alpha
           proteobacterium HTCC2255
          Length = 293

 Score = 36.7 bits (81), Expect = 0.77
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = -1

Query: 850 LTTFFXLXIKKLALQIQKMAKSTFSTPIQVYIRIPTXNIW 731
           L++FF L + K  L +  ++K  F+TP++VYI + T  IW
Sbjct: 35  LSSFFILIMSKF-LNLDNLSKGLFTTPLEVYILLSTFLIW 73


>UniRef50_Q55G70 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 925

 Score = 35.5 bits (78), Expect = 1.8
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +1

Query: 511 YSPERRDKDRDSYSRFSAERDSHRS-EGEYXXERYVDRKXYDGKWADGNETRKXHPTRRK 687
           Y  + RD+DRD       ERD  R  E E   ER  DR  Y  +    +  RK  PT+ +
Sbjct: 130 YGNKERDRDRDRERDRDRERDREREREKERERERERDRDRYGDR--STSRDRKDTPTKTE 187

Query: 688 GPQKNLKSN 714
             Q N  +N
Sbjct: 188 NDQDNDNTN 196


>UniRef50_Q16XG9 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 392

 Score = 35.1 bits (77), Expect = 2.4
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
 Frame = +1

Query: 526 RDKDRDSYSRF---SAER---DSHRSEGEYXXERYVDRKXYDGKWADGNETRKXHPTRRK 687
           RD+DRD   R+   S ER   D+HR +  Y  ERY D K  D    D N+  + + +  +
Sbjct: 32  RDRDRDRRDRYRDRSRERRRDDNHRDDRGYRSERYRDEKNRDRSHRDRNDRDRDYRSSSR 91

Query: 688 GPQKNLKS 711
             +   +S
Sbjct: 92  RDRSRSRS 99


>UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila
          melanogaster|Rep: Elastin like protein - Drosophila
          melanogaster (Fruit fly)
          Length = 110

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +2

Query: 29 LELVDPPGCRNSAR 70
          LELVDPPGCRNSAR
Sbjct: 10 LELVDPPGCRNSAR 23


>UniRef50_Q589S4 Cluster: HMG protein TCF/LEF; n=1; Dugesia
          japonica|Rep: HMG protein TCF/LEF - Dugesia japonica
          (Planarian)
          Length = 263

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +2

Query: 32 ELVDPPGCRNSARG 73
          +LVDPPGCRNSARG
Sbjct: 5  QLVDPPGCRNSARG 18


>UniRef50_A6S8U0 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 634

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 22/55 (40%), Positives = 30/55 (54%)
 Frame = +1

Query: 520 ERRDKDRDSYSRFSAERDSHRSEGEYXXERYVDRKXYDGKWADGNETRKXHPTRR 684
           ERR+K+RD + R  AER   R  G Y  ER ++R+     W D    R+  P+RR
Sbjct: 587 ERREKERDDWER--AERRRERDSG-YDDERIIEREII---WDD--HRRRERPSRR 633


>UniRef50_Q4SWZ1 Cluster: Chromosome undetermined SCAF13295, whole
           genome shotgun sequence; n=3; Tetraodontidae|Rep:
           Chromosome undetermined SCAF13295, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 299

 Score = 33.1 bits (72), Expect = 9.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 711 TL*ILLGAFSSCWVXLSGFVSIGPFSVVXFPIDV 610
           TL ++LGAF  CW      ++ GPF+ +  P+ V
Sbjct: 228 TLAVVLGAFLLCWTPFFLCITFGPFTPLSIPVSV 261


>UniRef50_A6RVJ8 Cluster: Putative uncharacterized protein; n=1;
            Botryotinia fuckeliana B05.10|Rep: Putative
            uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 1357

 Score = 33.1 bits (72), Expect = 9.5
 Identities = 21/71 (29%), Positives = 29/71 (40%)
 Frame = +1

Query: 511  YSPERRDKDRDSYSRFSAERDSHRSEGEYXXERYVDRKXYDGKWADGNETRKXHPTRRKG 690
            +S   R++DR     FS  RDS R  G Y     + RK  DG   D  +  +  P  RK 
Sbjct: 1193 HSSRDRERDRARSHNFSDSRDSRRESGGYGSSTPLKRKYSDG---DDEKQLERRPKYRKS 1249

Query: 691  PQKNLKSNPII 723
                   N ++
Sbjct: 1250 DNGEPAQNDML 1260


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,020,960
Number of Sequences: 1657284
Number of extensions: 10020556
Number of successful extensions: 28376
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28201
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)