Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0265
         (820 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.2  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   2.9  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 649 SYLPKIRALGLSVLKVGLASVKFLIDVVVRPIRSDSF 539
           SYLP IRALG S  K    +  + I   V P++  +F
Sbjct: 33  SYLPFIRALGKS--KKEFKTRTYFIYAFVAPVKCLAF 67


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 649 SYLPKIRALGLSVLKVGLASVKFLIDVVVRPIRSDSF 539
           SYLP IRALG S  K    +  + I   V P++  +F
Sbjct: 266 SYLPFIRALGKS--KKEFKTRTYFIYAFVAPVKCLAF 300


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 649 SYLPKIRALGLSVLKVGLASVKFLIDVVVRPIRSDSF 539
           SYLP IRALG S  K    +  + I   V P++  +F
Sbjct: 266 SYLPFIRALGKS--KKEFKTRTYFIYAFVAPVKCLAF 300


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 66  EVTQILYSNIQKLLPTQESRDLAE 137
           EV Q+    +QK L T+E +DL +
Sbjct: 19  EVAQVWEQTLQKGLDTEEIKDLLQ 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,784
Number of Sequences: 336
Number of extensions: 3621
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)