Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0265
         (820 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0167 - 26415319-26415494,26415591-26415840,26415909-264159...    37   0.017
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646...    30   1.9  
03_05_0136 + 21158917-21159939,21160183-21160241,21160259-211602...    30   2.5  
12_02_0735 - 22636835-22639502,22639755-22640734                       29   4.4  
05_05_0114 - 22488172-22488279,22488414-22488511,22488616-224887...    29   5.9  
01_06_1732 - 39531577-39531726,39531809-39531925,39532175-395323...    28   7.8  

>02_05_0167 -
           26415319-26415494,26415591-26415840,26415909-26415974,
           26416457-26416600,26416813-26416868,26416966-26417101,
           26417190-26417277,26417379-26417482,26418515-26419180,
           26419337-26419432,26419974-26420242,26420334-26420489,
           26421153-26421192
          Length = 748

 Score = 37.1 bits (82), Expect = 0.017
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = -1

Query: 409 DVREITGVQLFEEAPRCLSSKRRSGLN*AWGSEEVRKVGRRVDNAKFVQLSP 254
           DV  ++GV L EE  + LS+ +      +W SEE RK+ +  D   F+Q  P
Sbjct: 463 DVTAVSGVNLREEEEQLLSAPKEE----SWASEEARKIAQEEDGKLFLQKGP 510


>04_03_0660 +
           18463011-18463322,18463424-18463516,18464500-18464607,
           18464892-18465044,18465256-18465354,18465443-18465571,
           18465987-18466166,18466208-18466246,18466247-18466363,
           18466445-18466609
          Length = 464

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +2

Query: 377 KQLYSGDFPDILALLRAYRPRSINPLDEVPSKLRAVV 487
           ++L +GDF   L LL++Y P +I+ L  + +KLR  +
Sbjct: 426 RRLLAGDFTANLKLLQSYPPTNIDHLLHIANKLRGPI 462


>03_05_0136 +
           21158917-21159939,21160183-21160241,21160259-21160294,
           21160345-21160387,21160582-21160698,21162090-21162179,
           21162329-21162436,21162547-21162588
          Length = 505

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 309 SSLPQAQLSPLRLLLERQRGASSNSCTPVISLTSWPFSEPTD 434
           S LP A LSP+R    R    S     P I+ T WP S  ++
Sbjct: 24  SPLPAAALSPVRPSARRSPAVSRPDPAPSIARTIWPSSSSSN 65


>12_02_0735 - 22636835-22639502,22639755-22640734
          Length = 1215

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 270 NLALSTRRPTLRTSSLPQAQLSPLRLLL 353
           N     RRP  R +S+ QA LSP RLL+
Sbjct: 303 NFGARCRRPLTRKTSVSQAILSPYRLLI 330


>05_05_0114 -
           22488172-22488279,22488414-22488511,22488616-22488784,
           22489310-22489377,22490485-22490521,22490660-22490741,
           22490845-22490903
          Length = 206

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +2

Query: 314 AAPSSIKSAPSLAGEATWSFFKQLYSGDFPDILAL 418
           A PSS+ S+ ++AG+ TW+  + +++     IL L
Sbjct: 32  APPSSVHSSYAVAGDLTWAILETIHAAIGHQILTL 66


>01_06_1732 -
           39531577-39531726,39531809-39531925,39532175-39532354,
           39532704-39532802,39533571-39533675,39534046-39534138,
           39534243-39534326
          Length = 275

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 377 KQLYSGDFPDILALLRAYRPRSINPLDEVPSKL 475
           K+L +GDF   L LL+ Y P +I+ L  V +KL
Sbjct: 242 KRLLAGDFTSNLKLLQNYPPTNISHLLYVANKL 274


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,781,852
Number of Sequences: 37544
Number of extensions: 421042
Number of successful extensions: 1149
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)