Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0265
         (820 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    43   4e-04
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    43   4e-04
AY071351-1|AAL48973.1|  564|Drosophila melanogaster RE38869p pro...    29   7.6  
AE014134-2108|AAN10789.1|  564|Drosophila melanogaster CG14935-P...    29   7.6  
AE014134-2107|AAF53128.2|  583|Drosophila melanogaster CG14935-P...    29   7.6  

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 22/63 (34%), Positives = 35/63 (55%)
 Frame = +3

Query: 54   EKILEVTQILYSNIQKLLPTQESRDLAEAIHSYVQKKLRNQKCDDEKELRVVYQKLITAV 233
            EK  E+T  L+  I  L  T E+ +  + +H Y+  KL+ +  D+EK +  + Q LI AV
Sbjct: 2650 EKATELTNSLFDQINILPQTPETSEFLQKLHDYLIAKLKQEHIDNEKYIEELGQLLIKAV 2709

Query: 234  TSL 242
             S+
Sbjct: 2710 RSI 2712



 Score = 35.1 bits (77), Expect = 0.12
 Identities = 20/63 (31%), Positives = 33/63 (52%)
 Frame = +1

Query: 511  FDGRHLTFPGNCRYVLGARPRRLETSRWLIQLSKRKAQGLLFWEDKSGXFIELKENGQAI 690
            FDG +  +PGNC+Y+L A+         + QL+  K + +    D+ G + E+ +N    
Sbjct: 2799 FDGLNFAYPGNCKYIL-AQDSVDNNFTIIGQLTNGKLKSITL-IDREGSYFEVADNLALK 2856

Query: 691  LNG 699
            LNG
Sbjct: 2857 LNG 2859


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 22/63 (34%), Positives = 35/63 (55%)
 Frame = +3

Query: 54   EKILEVTQILYSNIQKLLPTQESRDLAEAIHSYVQKKLRNQKCDDEKELRVVYQKLITAV 233
            EK  E+T  L+  I  L  T E+ +  + +H Y+  KL+ +  D+EK +  + Q LI AV
Sbjct: 2650 EKATELTNSLFDQINILPQTPETSEFLQKLHDYLIAKLKQEHIDNEKYIEELGQLLIKAV 2709

Query: 234  TSL 242
             S+
Sbjct: 2710 RSI 2712



 Score = 35.1 bits (77), Expect = 0.12
 Identities = 20/63 (31%), Positives = 33/63 (52%)
 Frame = +1

Query: 511  FDGRHLTFPGNCRYVLGARPRRLETSRWLIQLSKRKAQGLLFWEDKSGXFIELKENGQAI 690
            FDG +  +PGNC+Y+L A+         + QL+  K + +    D+ G + E+ +N    
Sbjct: 2799 FDGLNFAYPGNCKYIL-AQDSVDNNFTIIGQLTNGKLKSITL-IDREGSYFEVADNLALK 2856

Query: 691  LNG 699
            LNG
Sbjct: 2857 LNG 2859


>AY071351-1|AAL48973.1|  564|Drosophila melanogaster RE38869p
           protein.
          Length = 564

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +2

Query: 275 GIINTTPDFANFFAAPSSIKSAPSLAGEAT----WSFFKQLYSGDFPDILALLRAYR 433
           G+     D  N      S+K  P L+G+ T    + + K +YS D P++L ++  +R
Sbjct: 206 GVAGFRIDAVNHLFEDESLKDEP-LSGKTTDSLSYDYTKHIYSRDLPEVLEMIHHWR 261


>AE014134-2108|AAN10789.1|  564|Drosophila melanogaster CG14935-PA,
           isoform A protein.
          Length = 564

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +2

Query: 275 GIINTTPDFANFFAAPSSIKSAPSLAGEAT----WSFFKQLYSGDFPDILALLRAYR 433
           G+     D  N      S+K  P L+G+ T    + + K +YS D P++L ++  +R
Sbjct: 206 GVAGFRIDAVNHLFEDESLKDEP-LSGKTTDSLSYDYTKHIYSRDLPEVLEMIHHWR 261


>AE014134-2107|AAF53128.2|  583|Drosophila melanogaster CG14935-PB,
           isoform B protein.
          Length = 583

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +2

Query: 275 GIINTTPDFANFFAAPSSIKSAPSLAGEAT----WSFFKQLYSGDFPDILALLRAYR 433
           G+     D  N      S+K  P L+G+ T    + + K +YS D P++L ++  +R
Sbjct: 225 GVAGFRIDAVNHLFEDESLKDEP-LSGKTTDSLSYDYTKHIYSRDLPEVLEMIHHWR 280


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,415,356
Number of Sequences: 53049
Number of extensions: 700669
Number of successful extensions: 2579
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2579
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)