Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0264
(588 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29190| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_24373| Best HMM Match : Skb1 (HMM E-Value=1.6e-05) 34 0.099
SB_12127| Best HMM Match : Endonuclease_NS (HMM E-Value=2.9e-35) 33 0.13
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 0.53
SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9) 31 0.70
SB_35930| Best HMM Match : SNF2_N (HMM E-Value=1.3004e-42) 31 0.92
SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3) 30 1.2
SB_42106| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 1.6
SB_23713| Best HMM Match : Disintegrin (HMM E-Value=6.6e-05) 30 1.6
SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3) 29 2.1
SB_41234| Best HMM Match : CASP_C (HMM E-Value=0.79) 29 2.8
SB_7549| Best HMM Match : TraB (HMM E-Value=6.79994e-41) 29 2.8
SB_44584| Best HMM Match : DEAD_2 (HMM E-Value=0.12) 29 3.7
SB_22414| Best HMM Match : Taeniidae_ag (HMM E-Value=5.1) 29 3.7
SB_10556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_30818| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_17095| Best HMM Match : GRP (HMM E-Value=1.6) 28 4.9
SB_7004| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_57501| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_44848| Best HMM Match : COQ7 (HMM E-Value=1.6) 28 6.5
SB_32284| Best HMM Match : FGGY_N (HMM E-Value=2.6e-07) 28 6.5
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_26281| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19) 28 6.5
SB_15413| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_4012| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_43284| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_34365| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_28246| Best HMM Match : M (HMM E-Value=0.0007) 27 8.6
SB_14107| Best HMM Match : Herpes_UL3 (HMM E-Value=4.8) 27 8.6
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 27 8.6
SB_11533| Best HMM Match : Baculo_PEP_C (HMM E-Value=3.6) 27 8.6
SB_10567| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39) 27 8.6
SB_30249| Best HMM Match : Extensin_2 (HMM E-Value=0.035) 27 8.6
SB_13711| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_6008| Best HMM Match : CPSase_L_D2 (HMM E-Value=0) 27 8.6
>SB_29190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +1
Query: 226 DGSWRTLPRIVGYLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCE 405
DG + G +G ++ S +GAA G +G I V P + K++I V+
Sbjct: 3 DGDQPSYVAFFGVMGATAAMVFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 62
Query: 406 AVAIYGLITAIVLSGMLEK 462
+AIYGL+ A+++ + K
Sbjct: 63 IIAIYGLVVAVLIGSSISK 81
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1
Query: 265 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 444
LG SV LS + A I G + V G + PR+ ++ +IF E + +YGLI A++L
Sbjct: 92 LGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 151
Query: 445 S 447
+
Sbjct: 152 T 152
>SB_24373| Best HMM Match : Skb1 (HMM E-Value=1.6e-05)
Length = 494
Score = 33.9 bits (74), Expect = 0.099
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 444 EHDSSDQTVNGDGLAEDDGDQILSLDS-RCFDTSSHYADTSSVDAHGCSDNGQGNGKGDS 268
++++ D+ + DG DD D+ +D+ CF + D S D GC N N KG+
Sbjct: 272 DYNNDDEENDDDGNDSDDDDERNDVDNEECF-VAEICKDKSMQDVSGCIVNNSPNVKGNK 330
Query: 267 EVPH 256
++ H
Sbjct: 331 QLLH 334
>SB_12127| Best HMM Match : Endonuclease_NS (HMM E-Value=2.9e-35)
Length = 1577
Score = 33.5 bits (73), Expect = 0.13
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Frame = +1
Query: 181 RCTTSSMERVSR*VWDGSW-RTLPRIVGYLGIAFSVALSVVGAAMGIHTTGVSIVGGGVK 357
R T + +E V+ +WDG W R I G + ++ V VG M T VG V
Sbjct: 242 RGTQTKIEGVNNLIWDGKWSRNGADINGNVPLSRRVETRSVGVGMMRSFTKECGVGDSVA 301
Query: 358 APRIKTKNLISVI-----FCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWRRDT* 522
+++ + S + C+A+ + + + +L+ S+ +++ + Q N + +T
Sbjct: 302 VQKVEDSGIQSSVAVVEQACDAIDVSLDDVGVTVKPLLK--SKATSTLDIAQDNGKPET- 358
Query: 523 CSALDSLLGLVNPFCGIAVG 582
+ G PF + VG
Sbjct: 359 -LNAQTQTGFSEPFVSVGVG 377
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -1
Query: 438 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 265
+ D +GDG +D+GD D D + GC DNG+G+G GD +
Sbjct: 581 NGGDGGCDGDGFGDDNGDGF-------GDGDGDGCDDGDGEGEGC-DNGEGDGDGDGD 630
>SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9)
Length = 560
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = -1
Query: 444 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 265
++D+ D+ +N D A DD D ++ D+ + AD ++ G D+ G+ D E
Sbjct: 219 DNDADDENINSDDDAADDADYYVNSDADDDINGDYDADDEDING-GDDDDINGDNDADDE 277
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = -1
Query: 444 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 265
++D+ D+ +N D A DD D ++ D+ AD ++ G D + GD +
Sbjct: 365 DNDADDENINSDDDAADDADYYVNSDADDDINGDDDADDEDINI-GDDDAADDDIYGDGD 423
Query: 264 VPHNTG 247
V G
Sbjct: 424 VDDING 429
>SB_35930| Best HMM Match : SNF2_N (HMM E-Value=1.3004e-42)
Length = 784
Score = 30.7 bits (66), Expect = 0.92
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = -1
Query: 444 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 265
E+D D V+ D DD S R TS D S+D SD + G
Sbjct: 705 EYDDGDFDVDDDNDDVDDNVDASSTHDRTKRTSQQCVDECSIDDQDSSDERKHGNAGKIS 764
Query: 264 VPHNTGKC 241
+P T C
Sbjct: 765 IP-QTSNC 771
>SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3)
Length = 509
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -1
Query: 417 NGDGLA-EDDGDQILSLDSRCFDTSSHYADT--SSVDAHGCSDNGQGNGKGDSE 265
+GDG +DDG S D D S Y D S D GC D+G N GD +
Sbjct: 393 DGDGGGCDDDGGDDSSCDDDGGDDSGCYDDGNGSVFDDEGCDDSGCVNDGGDGD 446
>SB_42106| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 929
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 210 EQISLGWFLENTSPYCGVPRNRLFRCPVRCRSSHGHPHYWCQHSGRRCQS 359
E+ SL +F N + + + NR + P+RCR HP++W H R ++
Sbjct: 43 ERNSLKYFPGNNNRHT-IRENRP-KFPIRCRYLRLHPYHWRSHISLRMEA 90
>SB_23713| Best HMM Match : Disintegrin (HMM E-Value=6.6e-05)
Length = 1154
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/65 (33%), Positives = 27/65 (41%)
Frame = -1
Query: 441 HDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEV 262
+D D +GDG + DGD D D Y D D G DNG G GDS+
Sbjct: 144 NDDGDGDGDGDGDGDGDGDGNDDGDGDGNDDGDGYGDGDG-DGDGDGDNG---GLGDSDC 199
Query: 261 PHNTG 247
+ G
Sbjct: 200 NDDCG 204
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = -1
Query: 441 HDSSDQTVNGDGLAEDDGDQILSLDSRCFDT--SSHYADTSSVDAHGCSDNGQGNGKGD 271
+D D +GDG + DGD DS C D + D+ DN +G GD
Sbjct: 172 NDDGDGYGDGDGDGDGDGDNGGLGDSDCNDDCGDGDFGGNGDYDSSVVYDNDGDDGSGD 230
>SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3)
Length = 99
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = -1
Query: 438 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 265
D D +GDG DDGD +D D D G D+G G GD +
Sbjct: 14 DDGDDGDDGDGDNGDDGDD-GDVDDNVCDGDGDDGDDGDNVCDGDGDDGDGGDDGDDD 70
>SB_41234| Best HMM Match : CASP_C (HMM E-Value=0.79)
Length = 296
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -1
Query: 420 VNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 265
VNGDG + DGD D D D G D+G G+G GD +
Sbjct: 208 VNGDGNGDGDGDGNGDGDGDDGDDDGDGGGDDDGDGDGV-DDGDGDGDGDCD 258
>SB_7549| Best HMM Match : TraB (HMM E-Value=6.79994e-41)
Length = 478
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Frame = -1
Query: 489 GHTSKWFRIFLQHTREHDSSDQTVNGDGLAEDDGDQILSLDS----RCFDTSSHYADTSS 322
GHT + F Q H +GD EDD D ++ +++ D S+Y
Sbjct: 44 GHTQQDFDDDSQEQINHPYDVSEDDGDDDDEDDDDAMMVIETPEGLTLLDHPSYYF-VHD 102
Query: 321 VDAHGCSDNGQGNGKGDSEVPHNTGKCSPRTIPNLSAH 208
+AH NG GD P ++G R+I H
Sbjct: 103 HEAHSVE-----NGSGDPSTPGDSGMSGERSITEELMH 135
>SB_44584| Best HMM Match : DEAD_2 (HMM E-Value=0.12)
Length = 540
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -1
Query: 426 QTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKG 274
+T+N E G QI +S+ + + Y D + D G +D G G G G
Sbjct: 37 ETINNIHSVEVSGAQIPIQNSKATNPPNLYVDNDNDDGGGDTDGGGGCGGG 87
>SB_22414| Best HMM Match : Taeniidae_ag (HMM E-Value=5.1)
Length = 249
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -1
Query: 423 TVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 265
TV DG + DGD D AD + DA GC +G G+G GD +
Sbjct: 24 TVGCDGDGDGDGDG----DGDGDGDGDADADADA-DADGCDGDGDGDGDGDGD 71
>SB_10556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1788
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -1
Query: 327 SSVDAHGCSDNGQGNG-KGDSEVPH--NTGKCSPRTIPN 220
SS+D + +G GNG KG P TG+ PRT P+
Sbjct: 708 SSIDGPATNSHGPGNGRKGPGTSPDGPGTGRKGPRTSPD 746
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 254 LWGTSESPFPLPCPLSEQPWASTLLVSA*WEEVSK 358
LW + P+ + C ++ QPW ++ A E SK
Sbjct: 1306 LWDNAVIPYEIDCSITSQPWGVRVIKEAMREWESK 1340
>SB_30818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Frame = -1
Query: 438 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTS------SHYADTSSVDAHGCSDNGQGNGK 277
D S + GD +DD D + D C D S +Y+ D + D+ GN
Sbjct: 21 DDSGEDDCGDNSGDDDSDDDIGDDDSCDDNSRDDDSGDYYSVDDDSDDNSIDDDSGGNSS 80
Query: 276 GDSEVPHNTG 247
D ++G
Sbjct: 81 DDYSGEDDSG 90
>SB_17095| Best HMM Match : GRP (HMM E-Value=1.6)
Length = 203
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -1
Query: 411 DGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGK--GDSEVPHNTGKC 241
DG DD D I D+ + D D DN G GK GD N G C
Sbjct: 75 DGADNDDDDDIDRTDNDGCGNDVDHDDNGDYDDCIDDDNNDGGGKGNGDGVGADNNGDC 133
>SB_7004| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 574 QFHRMDSPSPTASPAPN 524
+FHR DSP+P +P PN
Sbjct: 56 KFHRDDSPNPNPNPNPN 72
>SB_57501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = -1
Query: 438 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 265
D D N D +DD D + D D D D++ DNG GN D +
Sbjct: 74 DDDDDDDNDDD-KDDDDDDVDDDDDDNDDDDDDSDDDDDNDSNDDDDNGDGNDDDDDD 130
>SB_44848| Best HMM Match : COQ7 (HMM E-Value=1.6)
Length = 340
Score = 27.9 bits (59), Expect = 6.5
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Frame = +1
Query: 157 WDLQSRYFRCTTSSMERVSR*VWDGSWRTLPRIVGY---LGIAFSVALSVVGAAMGIHTT 327
++ Q Y + S++ + R + + ++ Y G+ +S + G G+ +
Sbjct: 28 YETQMHYLQNENESLKNIQRASLNTGVKYSGLVLTYGPLTGVKYSGLVLTYGPLTGVKYS 87
Query: 328 GVSIVGG---GVK-APRIKTKN-LISVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSV 486
G+ + G GVK + + T L V + V YGL+T + SG++ Y P T V
Sbjct: 88 GLVLTYGPLTGVKYSGLVLTYGPLTGVKYSGLVLTYGLLTGVKYSGLVLTYG-PLTGV 144
>SB_32284| Best HMM Match : FGGY_N (HMM E-Value=2.6e-07)
Length = 582
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -1
Query: 477 KWFRIFLQHTREHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYAD 331
K ++FL+ R+ Q + G DDG Q+ S D D S H D
Sbjct: 354 KKHKVFLKMQRDQLEYRQMMVDTGHVIDDGGQVTSNDRPVTDDSGHVID 402
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = -1
Query: 561 WIHQAQQRVQRRTSRIPPPVLLLDGHTSKW-----FRIFLQHTREHDSSDQTVNGDGLAE 397
W+H+A+ + + + PP LL H S + FR LQ E D V GL
Sbjct: 600 WLHEAEALLGYQETSDVPPKFLLRQHESFFENIDGFRRILQTITESGLDDSIVGDKGLLA 659
Query: 396 D 394
D
Sbjct: 660 D 660
>SB_26281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 43 NRAKKGRPFRD*RVKTAPNTLTKISR*DTS*VTYSCSWWDLQSRYFRC 186
N+A+ G PF + +AP L S T+ VT C+ S+Y C
Sbjct: 77 NKARCGYPFYSEPISSAPKVLELKSEEKTAMVTTGCTIDLAASQYLHC 124
>SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 102 LNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQ 215
+ Q + ++Y+F LLV +IP + VLN GEQ
Sbjct: 424 IEQIMDQEVLMTYIFHLLVIASIPYVLVLQVLNLSGEQ 461
>SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19)
Length = 1562
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 154 WWDLQSRYFRCTTSSMERVSR*VWDGSWRTLPRIVGYLGIAFSVA 288
+W SR+ R ++S+ + +S SWR L ++G ++ SVA
Sbjct: 617 FWFSSSRFSRSSSSNSDSLSSLRSRASWRLLSDVLGSSMVSLSVA 661
>SB_15413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 258 HNTGKCSPRTIPNLSAHPFH*GRSTAKI 175
HN + SPR P AHP H STA++
Sbjct: 34 HNRSR-SPRATPKAPAHPIHLRASTAQM 60
>SB_4012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -1
Query: 441 HDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGC--SDNGQGNGKGDS 268
H+ D +GDG + DGD + D C D + GC +D+G G+G GD
Sbjct: 42 HEDDD---DGDGNDDCDGDDDIRGDG-CVVVD----DDDDIRGDGCVVNDDGDGDGDGDG 93
Query: 267 EV 262
++
Sbjct: 94 DI 95
>SB_43284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -1
Query: 444 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSD-NGQGNGKGDS 268
+ D D +GDG +DD D D D D G D +G G+G GD
Sbjct: 94 DEDDDDDDGDGDGGDDDDDDDDDDDDDDDDDGDGDGDGDGDGDGDGDGDGDGDGDGDGDG 153
Query: 267 E 265
+
Sbjct: 154 D 154
>SB_34365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 333 DTSSVDAHGCSDNGQGNGKGDSEVPHNTG 247
D VD HGC+D+G N D+ P N G
Sbjct: 38 DDDDVD-HGCNDHGDDNDCDDNYDPGNGG 65
>SB_28246| Best HMM Match : M (HMM E-Value=0.0007)
Length = 1121
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +1
Query: 268 GIAFSVALSVVGAAMGIHTTGVSIVGG---GVK-APRIKTKN-LISVIFCEAVAIYGLIT 432
G+ +S + G G+ +G+ + G GVK + + T L V + V YGL+T
Sbjct: 835 GVKYSGLVLTYGLLTGVKYSGLVLTYGLLTGVKYSGLVLTYGPLTGVKYSGLVLTYGLLT 894
Query: 433 AIVLSGMLEKYSEPFTSV 486
+ SG++ Y P T V
Sbjct: 895 GVKYSGLVLTYG-PLTGV 911
>SB_14107| Best HMM Match : Herpes_UL3 (HMM E-Value=4.8)
Length = 314
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -1
Query: 411 DGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 265
DG +DDGD D C D GC +G G+G GD +
Sbjct: 19 DGDGDDDGDDDGGGD--CGGDGDGDGDGDGDGDGGCDGDGDGDGDGDDD 65
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Frame = -1
Query: 537 VQRRTSRIPPPVLLLDGHTSKWFRIFLQHTREHDSSDQTVNGDGLAEDDGDQILSLDSRC 358
+Q R + IP P + + + +I + + S+ N D A D G+ S
Sbjct: 2060 LQEREAVIPTPTIQTSDNLMEGIQIEEESPGNSECSNNAFN-DAEA-DQGNATPQRTSTP 2117
Query: 357 FDTSSHYADTS-SVDAHGCSDNGQGNGKGDSEVPHNTG 247
D+ Y D G +D+G G G D+ + + G
Sbjct: 2118 LDSKQGYTPLGIREDRQGDADDGYGQGGDDTNLTYTLG 2155
>SB_11533| Best HMM Match : Baculo_PEP_C (HMM E-Value=3.6)
Length = 491
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -1
Query: 438 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 265
D D +G+G +DD D D D D D +G D+ G+G GD +
Sbjct: 393 DDDDDDGDGNG-GDDDDDDDGDGDGDDGDGDDGDNDDDDGDGNGDDDDDDGDGDGDGD 449
>SB_10567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -1
Query: 399 EDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEVPHNTGKCSP 235
E DG L +DS D+ S D+ SV+ G QGN + + CSP
Sbjct: 24 EVDGIDKLDVDSDSVDSDS--VDSDSVERLGVQVTKQGNEGNTNRGKGGSNSCSP 76
>SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39)
Length = 1024
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = -1
Query: 450 TREHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGD 271
+R D D T +G G +D+GD+ D D H D + D DNG G G D
Sbjct: 58 SRGVDGDDYTDDGSGNDDDNGDENYDDDGGSDD--DHDDDNGNYD----DDNGVGVGNYD 111
Query: 270 SE 265
+
Sbjct: 112 DD 113
>SB_30249| Best HMM Match : Extensin_2 (HMM E-Value=0.035)
Length = 624
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = -1
Query: 420 VNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEVPHNTGKC 241
+N DG +DDGD D D ++ D +G+G GD + G C
Sbjct: 342 LNNDG-QDDDGDDANGYGGDVDDGCGDGGDYNNGGCDDGCDGDEGDGGGDDDGDGGDGGC 400
Query: 240 S 238
S
Sbjct: 401 S 401
>SB_13711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +1
Query: 364 RIKTKNLISVIF-CEAVAIYGLITAIVL 444
R+ K L+ VIF CEAV ++GL+TAI +
Sbjct: 167 RVPCKILVFVIFTCEAV-MFGLLTAIAI 193
>SB_6008| Best HMM Match : CPSase_L_D2 (HMM E-Value=0)
Length = 866
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 420 VNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGD 271
V D +DD D D D + + + HG D+G G+G GD
Sbjct: 712 VTNDSGGDDDNDG--EFDGYGNDNNDYNDGDGEYNYHGGDDDGDGDGDGD 759
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,149,744
Number of Sequences: 59808
Number of extensions: 448456
Number of successful extensions: 2165
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2125
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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