Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0264
(588 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 102 2e-22
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 102 2e-22
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 53 2e-07
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 53 2e-07
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 53 2e-07
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 52 3e-07
Z69718-2|CAA93536.1| 139|Caenorhabditis elegans Hypothetical pr... 31 0.46
AF040647-11|AAB94992.4| 270|Caenorhabditis elegans Hypothetical... 29 2.4
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass... 29 3.2
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass... 29 3.2
AC006730-11|ABO16462.1| 327|Caenorhabditis elegans Hypothetical... 29 3.2
AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin reu... 28 4.3
AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of... 28 4.3
AF038608-10|AAC25814.2| 327|Caenorhabditis elegans Serpentine r... 28 5.7
AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine r... 28 5.7
Z81139-7|CAI46624.1| 358|Caenorhabditis elegans Hypothetical pr... 27 7.5
U80023-15|AAG24046.1| 343|Caenorhabditis elegans Serpentine rec... 27 7.5
Z80219-2|CAB02298.1| 317|Caenorhabditis elegans Hypothetical pr... 27 9.9
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 9.9
U41273-1|AAA82453.1| 516|Caenorhabditis elegans Hypothetical pr... 27 9.9
AL132948-16|CAD31817.1| 319|Caenorhabditis elegans Hypothetical... 27 9.9
AF106584-1|AAC78221.1| 360|Caenorhabditis elegans Hypothetical ... 27 9.9
AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 102 bits (245), Expect = 2e-22
Identities = 58/119 (48%), Positives = 76/119 (63%), Gaps = 5/119 (4%)
Frame = +1
Query: 241 TLPRIVGYLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIY 420
T P + LGI FS++LSV+GA GI TTG SI+GGGVKAPRI+TKNL+S+IFCEAVAI+
Sbjct: 46 TSPHMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIF 105
Query: 421 GLITAIVLSGMLEKYSE---PFT--SVSVKQQNWRRDT*CSALDSLLGLVNPFCGIAVG 582
G+I A V G L ++ P T +++ +N +GL N CG+AVG
Sbjct: 106 GIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVG 164
Score = 36.7 bits (81), Expect = 0.012
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 183 LYYVLNGKGEQISLGWFLENTSPY 254
L+Y+L+G+G + +GWFL +TSP+
Sbjct: 26 LFYMLSGQGHRFDIGWFLTSTSPH 49
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 102 bits (245), Expect = 2e-22
Identities = 58/119 (48%), Positives = 76/119 (63%), Gaps = 5/119 (4%)
Frame = +1
Query: 241 TLPRIVGYLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIY 420
T P + LGI FS++LSV+GA GI TTG SI+GGGVKAPRI+TKNL+S+IFCEAVAI+
Sbjct: 46 TSPHMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIF 105
Query: 421 GLITAIVLSGMLEKYSE---PFT--SVSVKQQNWRRDT*CSALDSLLGLVNPFCGIAVG 582
G+I A V G L ++ P T +++ +N +GL N CG+AVG
Sbjct: 106 GIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVG 164
Score = 36.7 bits (81), Expect = 0.012
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 183 LYYVLNGKGEQISLGWFLENTSPY 254
L+Y+L+G+G + +GWFL +TSP+
Sbjct: 26 LFYMLSGQGHRFDIGWFLTSTSPH 49
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/70 (38%), Positives = 39/70 (55%)
Frame = +1
Query: 259 GYLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAI 438
GY+G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A+
Sbjct: 18 GYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAM 77
Query: 439 VLSGMLEKYS 468
VL G + S
Sbjct: 78 VLKGKVTSAS 87
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 262 YLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIV 441
+L + L +GA I G + V G + PR+ ++ +IF E + +YG+I A++
Sbjct: 98 HLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALI 157
Query: 442 L 444
L
Sbjct: 158 L 158
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/70 (38%), Positives = 39/70 (55%)
Frame = +1
Query: 259 GYLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAI 438
GY+G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A+
Sbjct: 18 GYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAM 77
Query: 439 VLSGMLEKYS 468
VL G + S
Sbjct: 78 VLKGKVTSAS 87
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 262 YLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIV 441
+L + L +GA I G + V G + PR+ ++ +IF E + +YG+I A++
Sbjct: 98 HLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALI 157
Query: 442 L 444
L
Sbjct: 158 L 158
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/70 (38%), Positives = 39/70 (55%)
Frame = +1
Query: 259 GYLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAI 438
GY+G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A+
Sbjct: 18 GYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAM 77
Query: 439 VLSGMLEKYS 468
VL G + S
Sbjct: 78 VLKGKVTSAS 87
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 262 YLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIV 441
+L + L +GA I G + V G + PR+ ++ +IF E + +YG+I A++
Sbjct: 98 HLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALI 157
Query: 442 L 444
L
Sbjct: 158 L 158
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/70 (38%), Positives = 39/70 (55%)
Frame = +1
Query: 259 GYLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAI 438
GY+G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A+
Sbjct: 18 GYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAM 77
Query: 439 VLSGMLEKYS 468
VL G + S
Sbjct: 78 VLKGKVTSAS 87
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 262 YLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIV 441
+L + L +GA I G + V G + PR+ ++ +IF E + +YG+I A++
Sbjct: 98 HLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALI 157
Query: 442 L 444
L
Sbjct: 158 L 158
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +1
Query: 259 GYLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAI 438
G LG+ ++A + G+A G G I V P + K +I V+ VAIYGL+ A+
Sbjct: 26 GSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVAV 85
Query: 439 VLSGMLEKYSEPFT 480
++SG +E +T
Sbjct: 86 IVSGKVEPAGANYT 99
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 298 VGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 444
+GA I G + V + PR+ ++ +IF E + +YG+I A++L
Sbjct: 118 LGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALIL 166
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +1
Query: 259 GYLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAI 438
G LG+ ++A + G+A G G I V P + K +I V+ VAIYGL+ A+
Sbjct: 26 GSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVAV 85
Query: 439 VLSGMLEKYSEPFT 480
++SG +E +T
Sbjct: 86 IVSGKVEPAGANYT 99
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 298 VGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 444
+GA I G + V + PR+ ++ +IF E + +YG+I A++L
Sbjct: 118 LGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALIL 166
>Z69718-2|CAA93536.1| 139|Caenorhabditis elegans Hypothetical
protein W06D11.3 protein.
Length = 139
Score = 31.5 bits (68), Expect = 0.46
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -1
Query: 426 QTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEVP 259
+TV+ + + DG++I S ++ +H DTSS D G +D+ N K E+P
Sbjct: 82 ETVDAEN-EQQDGEKIAS-NTGDAPNITHLVDTSSSDIAGTTDSNNNNDKKTEELP 135
>AF040647-11|AAB94992.4| 270|Caenorhabditis elegans Hypothetical
protein F54D12.1 protein.
Length = 270
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 463 YSEPFTSVSVKQQNWRRDT*CSALDSLLGLVNPF 564
YSE +VS K W ++D LLG++NP+
Sbjct: 81 YSELRDTVSFKMLTWPEQCTKRSVDMLLGIINPY 114
>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform a protein.
Length = 1020
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -1
Query: 459 LQHTREHDSSDQTVNGDGLAEDDGDQIL-----SLDSRCFDTSSHYADTSSV 319
+QHT SS T +GD DD + SLD + TSS + +T+SV
Sbjct: 229 VQHTNSVGSSIGTTSGDSEISDDDQKSWSPKNESLDYQPASTSSEFTETTSV 280
>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform b protein.
Length = 1061
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -1
Query: 459 LQHTREHDSSDQTVNGDGLAEDDGDQIL-----SLDSRCFDTSSHYADTSSV 319
+QHT SS T +GD DD + SLD + TSS + +T+SV
Sbjct: 270 VQHTNSVGSSIGTTSGDSEISDDDQKSWSPKNESLDYQPASTSSEFTETTSV 321
>AC006730-11|ABO16462.1| 327|Caenorhabditis elegans Hypothetical
protein Y27F2A.11 protein.
Length = 327
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 111 NLKMRYFLS--YLFVLLVGLAIPIFSLYYVLNGKGEQISLGWFLENTSPYCGVPRNRLFR 284
N + Y+LS Y + ++ + + +FS+Y +L + + +FL N +N +FR
Sbjct: 5 NFSIAYWLSTYYHIIGVISMIVDLFSIYLILFKSNKLDNFRYFLLNFQVQLNFEKNIIFR 64
>AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin
reuptake transporter protein.
Length = 671
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 132 LSYLFVLLVGLAIPIFSLYYVLNGKG 209
L + LL LAIP+F++ Y+L+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627
>AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 5 protein.
Length = 671
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 132 LSYLFVLLVGLAIPIFSLYYVLNGKG 209
L + LL LAIP+F++ Y+L+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627
>AF038608-10|AAC25814.2| 327|Caenorhabditis elegans Serpentine
receptor, class z protein78 protein.
Length = 327
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 102 GIWCCFYPLIPKGTAFFRPIFALTRKLKTERSC 4
G FY L+ TAF+ PI TRK + ++C
Sbjct: 198 GFVALFYVLLFLSTAFYIPIMIRTRKFASIQNC 230
>AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine
receptor, class t protein8 protein.
Length = 350
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 126 YFLSYLFVLLVGLAIPIFSLYYVLN 200
YFL +L VL + L IP++ L VL+
Sbjct: 52 YFLCFLAVLKLNLKIPVYQLMLVLS 76
>Z81139-7|CAI46624.1| 358|Caenorhabditis elegans Hypothetical
protein W05H5.5 protein.
Length = 358
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 99 YLNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVL 197
Y++ LK+R F L++L +IP+F L+YVL
Sbjct: 50 YVHVTLKIRLFHRNLYIL----SIPVFFLWYVL 78
>U80023-15|AAG24046.1| 343|Caenorhabditis elegans Serpentine
receptor, class h protein200 protein.
Length = 343
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 84 KNSTKYLNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVL 197
KN+ NL+ ++F++ L L+V L F +YVL
Sbjct: 229 KNTMSRRTFNLQRKFFITLLIQLIVPLVFFFFPSFYVL 266
>Z80219-2|CAB02298.1| 317|Caenorhabditis elegans Hypothetical
protein T01H8.2 protein.
Length = 317
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 504 VLLLDGHTSKWFRIFLQHTREHDSSDQTVNGDGLA 400
V +++GH+S F I Q E DS +V G GLA
Sbjct: 153 VSMINGHSSVAFEILEQVGNEIDSIFLSVGGGGLA 187
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 556 SPSPTASPAPNITYPASSSAA 494
SP PT+SP P+ T+ +S+S +
Sbjct: 1348 SPVPTSSPIPSTTFASSTSGS 1368
>U41273-1|AAA82453.1| 516|Caenorhabditis elegans Hypothetical
protein C26B9.5 protein.
Length = 516
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 402 AEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCS 301
A++ G + L+ RCF S Y DTS C+
Sbjct: 119 AKEFGADVFQLEHRCFGQSRPYPDTSMPGIKVCT 152
>AL132948-16|CAD31817.1| 319|Caenorhabditis elegans Hypothetical
protein Y39B6A.19 protein.
Length = 319
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 301 GAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGL-ITAIVLSGMLEKYSEP 474
G A T +S VG G +PR + L ++++C + G+ +T +LS ++ + EP
Sbjct: 111 GQAFFFAGTLISTVGYGRVSPRTEYGKLFTILYC----VIGIPLTLALLSAIVARMREP 165
>AF106584-1|AAC78221.1| 360|Caenorhabditis elegans Hypothetical
protein F54A5.2 protein.
Length = 360
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 318 DAHGCSDNGQGNGKGDSEVPHNTGK 244
D+HGCS G GD EV GK
Sbjct: 209 DSHGCSLQTSGEVWGDFEVTRRNGK 233
>AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical
protein C50D2.2 protein.
Length = 589
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 265 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIV 441
+G F + S+VG + S+ G+ + + N + + +A+ I+G +TAI+
Sbjct: 321 VGALFGMTTSLVGGMFALPRCVFSMADDGLLFSSLASVNPKTQVPTQALLIFGFLTAII 379
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,801,544
Number of Sequences: 27780
Number of extensions: 333345
Number of successful extensions: 1272
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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