Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0264
(588 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 53 2e-09
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 2.2
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 2.9
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 23 2.9
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 23 2.9
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 3.9
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 3.9
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 6.8
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 6.8
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 6.8
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 9.0
AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein. 21 9.0
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 53.2 bits (122), Expect = 2e-09
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +1
Query: 259 GYLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAI 438
G +G A ++ S +GAA G +G I V P + K++I V+ +AIYGL+ A+
Sbjct: 14 GVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAV 73
Query: 439 VLSGMLEK 462
+++G LE+
Sbjct: 74 LIAGGLEE 81
Score = 39.9 bits (89), Expect = 2e-05
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1
Query: 262 YLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIV 441
+LG +V S + A I G + V G + PR+ ++ +IF E + +YGLI AI
Sbjct: 93 HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIY 152
Query: 442 L 444
L
Sbjct: 153 L 153
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 513 GYVMFGAGLAVG 548
G+V GAGLAVG
Sbjct: 90 GFVHLGAGLAVG 101
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/19 (47%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = -2
Query: 269 PRYPTIRGSVLQEPS-QTY 216
P+YP+ +LQ+PS +TY
Sbjct: 440 PQYPSTSSHILQQPSIRTY 458
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 450 TREHDSSDQTVNGDGLAE 397
TREH S + T++ DG+ E
Sbjct: 349 TREHPSRNFTMSEDGMIE 366
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 22.6 bits (46), Expect = 2.9
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 559 DSPSPTASPAPNITYPASSSAA*RTH**MVQNISPA 452
+SPSPT S + AS+S A RT M +S A
Sbjct: 60 NSPSPTGSSPQHSGSSASTSPAARTTSSMYPYVSAA 95
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 22.6 bits (46), Expect = 2.9
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 9/49 (18%)
Frame = +3
Query: 129 FLSYL-FVLLVGLAIPIFSLYYVLNG--------KGEQISLGWFLENTS 248
F S+L F+LLV +A+ +++ V N K ++I G+FL + S
Sbjct: 84 FASFLLFILLVQIAVAVYAFIVVKNDDNFRNISEKYQEIFNGYFLNSES 132
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +1
Query: 253 IVGYLGIAFSVALSVVGAAMGIHTTGVSIVG 345
I G+ + + A+ G HT G I+G
Sbjct: 132 ITGWSAVVITAAICTSGIVGRTHTVGYIIIG 162
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 3.9
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 312 HGCSDNGQGNGKGDS 268
+G +DNG GNG ++
Sbjct: 252 NGANDNGNGNGASNN 266
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 144 FVLLVGLAIPIFSLYYVL 197
F +L G+A+ +LYY L
Sbjct: 5 FEILCGIAVLFLALYYYL 22
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +3
Query: 117 KMRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISL 224
K ++ L + VG++ ++Y+ + GE++SL
Sbjct: 235 KTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSL 270
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +3
Query: 117 KMRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISL 224
K ++ L + VG+ ++Y+ + GE++SL
Sbjct: 248 KTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVSL 283
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 540 RVQRRTSRIPPPVLLLDGHTSKW 472
R+QR+ + I P V +D ++W
Sbjct: 333 RIQRQENNIRPMVKQIDTVAAEW 355
>AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein.
Length = 148
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -2
Query: 482 LVNGSEYFSSIPESTIAVI 426
L ++YF++ P +T+AV+
Sbjct: 130 LAIAAQYFNAKPSATVAVL 148
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,238
Number of Sequences: 438
Number of extensions: 4251
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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