Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0263
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5KCY5 Cluster: Variable surface protein Vir12-like; n=...    36   1.1  
UniRef50_UPI00015B5E66 Cluster: PREDICTED: similar to conserved ...    34   2.6  

>UniRef50_A5KCY5 Cluster: Variable surface protein Vir12-like; n=1;
           Plasmodium vivax|Rep: Variable surface protein
           Vir12-like - Plasmodium vivax
          Length = 771

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 624 YNYNPRFTKC*TFESIIHYFLNYSTIKNSFLSEQK 520
           +NYN +F++C   + +  YF +Y TIKN    +Q+
Sbjct: 446 FNYNCKFSECREMKHLYEYFKDYETIKNKINCDQR 480


>UniRef50_UPI00015B5E66 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 341

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 17/55 (30%), Positives = 31/55 (56%)
 Frame = -2

Query: 607 FYEMLNIRKYNSLLFKLLYNKKQLPIGTKVF*NKENKPKVIMTLFDKR*F*VKNF 443
           FY++L I K N  L+   +  KQL +  ++   K+N+  ++M+L   R   +KN+
Sbjct: 175 FYDVLRINKSNVCLYNFFHLVKQLTLQAEIRLQKDNRATLMMSLAQGRYCELKNY 229


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,230,849
Number of Sequences: 1657284
Number of extensions: 9037163
Number of successful extensions: 17856
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17840
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)