Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0263
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.41 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    25   0.72 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   0.95 
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = +1

Query: 364 CTYTKFVHYFCLIN*YSRYS*RCLFS*NFSLKIIVYQTMSLLPLVCFLYFKKLLFR*EAV 543
           C +  F  +F L   Y  Y+   L    +     +  T+ LL L+C  YF   LF    +
Sbjct: 87  CPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCI 146

Query: 544 FY 549
           +Y
Sbjct: 147 YY 148



 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 454 LKIIVYQTMSLLPLVCFLYFKKLLFR*EAVFYC 552
           L  I Y   +L+ L+C  YF +        FYC
Sbjct: 282 LLCIYYFYCALIILLCIYYFCRAFIIFPTHFYC 314


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 653 GQFCSVRVITTIIIPVLRNVKHSKV 579
           G FC ++ + T+ I V RN+K+  +
Sbjct: 556 GAFCKMQPLRTLKIGVYRNIKNFNI 580


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 528 PIGSCFLL*SSLKSNELYFRMFNIS*NGDYNCSYN 632
           P+   FL    LK N  Y  +   S N DY+C YN
Sbjct: 162 PVTHIFLQNLILKENT-YDAVIKWSPNEDYSCEYN 195


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 89  NCICSGW*FLCKQK 130
           NC+CS W   C  K
Sbjct: 219 NCLCSLWFINCTAK 232


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 89  NCICSGW*FLCKQK 130
           NC+CS W   C  K
Sbjct: 219 NCLCSLWFINCTAK 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,543
Number of Sequences: 336
Number of extensions: 2821
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)