Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0263
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0174 + 18919759-18920265,18920381-18920443,18921060-189217...    32   0.35 
12_02_0318 - 17457182-17462232,17462745-17462955,17463356-174634...    28   5.6  

>01_05_0174 +
           18919759-18920265,18920381-18920443,18921060-18921761,
           18922934-18923068,18923391-18923474,18924095-18924151,
           18924290-18924376,18924963-18925205
          Length = 625

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -2

Query: 604 YEML--NIRKYNSLLFKLLYNKKQLPIGTKVF*NKENKPKVIMTL 476
           YE L  + +KYN  L +LL+N K  P+      NKE  P V++T+
Sbjct: 447 YEALGSDFQKYNQKLRQLLFNIKNSPVLRNRLMNKELDPPVLLTM 491


>12_02_0318 -
           17457182-17462232,17462745-17462955,17463356-17463403,
           17466161-17466346
          Length = 1831

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 473 KQCHYYLWFVFFILKNFCSDRK 538
           ++C YY+W   F++K  C D+K
Sbjct: 299 EECTYYMWKQKFVVKPECRDKK 320


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,972,235
Number of Sequences: 37544
Number of extensions: 205126
Number of successful extensions: 259
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)