Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0262
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       26   0.26 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.8  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   4.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.3  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +2

Query: 167 VCRIYGADCKCEPGTKFIRCKSRGWHHSHQTLTLGQTNSKISK 295
           V RI   +C C+ G K   C  +  H  H T   G T   + K
Sbjct: 122 VDRIADFECNCKNGWKGKTCSLKDSHCDHTTCKNGGTCQDLGK 164


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 173 RIYGADCKCEPGTKFIRCK 229
           ++ G +CKC PG    RC+
Sbjct: 278 KVGGFECKCPPGFVGPRCE 296


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 453 ILSQSLFDSKSGYNSFNVSHSPLFGGL 373
           I++   +D  + +  F   +SPL+GG+
Sbjct: 196 IINVMTYDFHAMWAGFTAENSPLYGGV 222


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 206 LVHIYSLLHIFCTLKYFRIYIFSFQF 129
           L+H+  L+ I  TL    I+  S+Q+
Sbjct: 145 LIHLSGLVTIVATLTVTIIFFASYQY 170


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 206 LVHIYSLLHIFCTLKYFRIYIFSFQF 129
           L+H+  L+ I  TL    I+  S+Q+
Sbjct: 145 LIHLSGLVTIVATLTVTIIFFASYQY 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,778
Number of Sequences: 336
Number of extensions: 3191
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)