Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0260
         (800 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   1.1  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    23   3.3  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   4.4  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   4.4  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   4.4  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    22   5.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 208 RPRAPPAVRYSCPGTTMGPEPTNTSCPSCSAAIVT 312
           RP  PPA   S P T      T T+  + +AA  T
Sbjct: 92  RPLHPPASSTSLPATITTTTTTTTTTTATAAATAT 126



 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 190  PGRSFRRPRAPPAVRYSCPGTTMGP 264
            PG +  +P+  P   ++ PG   GP
Sbjct: 1117 PGTADNKPQLKPQKPFTSPGGIPGP 1141


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 716 QNRIVASPTLRQLMTEFIHYTVNKTLFLYVSSNTFRPIC 600
           +N ++ +    +L+T+ I  T     FLY S N    +C
Sbjct: 54  KNNLLNAYVRFKLVTDCIFVTSEPGYFLYTSKNDNEEVC 92


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
 Frame = +3

Query: 663 YKFSH*LPKCWAGNYTILECWVF----SKPKHYQWLIAXKF 773
           YK  H +  C  G  T   C  +    SKPK YQW    K+
Sbjct: 124 YKLEHPVTGC--GERTEGRCLHYTVDKSKPKVYQWFDLRKY 162


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
 Frame = +3

Query: 663 YKFSH*LPKCWAGNYTILECWVF----SKPKHYQWLIAXKF 773
           YK  H +  C  G  T   C  +    SKPK YQW    K+
Sbjct: 129 YKLEHPVTGC--GERTEGRCLHYTVDKSKPKVYQWFDLRKY 167


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
 Frame = +3

Query: 663 YKFSH*LPKCWAGNYTILECWVF----SKPKHYQWLIAXKF 773
           YK  H +  C  G  T   C  +    SKPK YQW    K+
Sbjct: 129 YKLEHPVTGC--GERTEGRCLHYTVDKSKPKVYQWFDLRKY 167


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -2

Query: 121 RQIGFLFIMGHFDLVSRITKCFIPELFN 38
           +Q+  +   GH D++ +  K  +PE+ N
Sbjct: 35  KQLHCILDRGHCDVIGKKIKELLPEVLN 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,309
Number of Sequences: 438
Number of extensions: 4346
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)