Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0259
         (427 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O26448 Cluster: Rhamnosyl transferase; n=1; Methanother...    34   1.4  
UniRef50_Q7RRT3 Cluster: Putative uncharacterized protein PY0063...    32   4.3  
UniRef50_A3GHI4 Cluster: Predicted protein; n=4; Saccharomycetal...    31   7.5  
UniRef50_P75441 Cluster: Uncharacterized protein MG241 homolog; ...    31   9.9  

>UniRef50_O26448 Cluster: Rhamnosyl transferase; n=1;
           Methanothermobacter thermautotrophicus str. Delta H|Rep:
           Rhamnosyl transferase - Methanobacterium
           thermoautotrophicum
          Length = 313

 Score = 33.9 bits (74), Expect = 1.4
 Identities = 13/55 (23%), Positives = 31/55 (56%)
 Frame = -2

Query: 372 YQFKITLRXFXYYFLG*NSLSDIFFNNPLINFRKICENKPTLKRLNWPNKNIFFL 208
           + F+  L+ F Y F+  + L + +F    I+F  +   +  ++R+ +P+K++F +
Sbjct: 153 FNFRNPLKHFTYDFITDDDLKEEYFKISAISFEGLLIKREAIERIGFPDKSLFII 207


>UniRef50_Q7RRT3 Cluster: Putative uncharacterized protein PY00634;
            n=12; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY00634 - Plasmodium yoelii yoelii
          Length = 5309

 Score = 32.3 bits (70), Expect = 4.3
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +1

Query: 121  IKYKIDSHYFCIIIYLVQYSLIQYLWSKK*KE 216
            +KY  D  YFC+II L  Y +I+Y+ SK+ KE
Sbjct: 3090 VKYNKDIIYFCLIISLSTY-VIEYICSKEMKE 3120


>UniRef50_A3GHI4 Cluster: Predicted protein; n=4;
           Saccharomycetales|Rep: Predicted protein - Pichia
           stipitis (Yeast)
          Length = 635

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 24/72 (33%), Positives = 36/72 (50%)
 Frame = +3

Query: 39  YQISVSNFEKRYYNLTLIGNLLLRSSVN*I*N*FTLFLHYNIPSTI*LNTISLEQKIKRK 218
           YQ+    F+   YN  ++ NLLL +  N + N   + LHY++ S   LN IS   K+  +
Sbjct: 470 YQLISKKFQDLLYNEKIVYNLLLPNLSNEL-N-LMIDLHYHLQS---LNNISSNSKVNER 524

Query: 219 YFCSANLTFLVS 254
                 L FL+S
Sbjct: 525 EVWYNILKFLIS 536


>UniRef50_P75441 Cluster: Uncharacterized protein MG241 homolog;
           n=5; Mycoplasma|Rep: Uncharacterized protein MG241
           homolog - Mycoplasma pneumoniae
          Length = 621

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 141 TLFLHYNIPSTI*LNTISLEQKIKRKYFCSANLTFLVSAYFHIFCGN 281
           T++LH+N  +   + + SL+  IKR    S      ++   H FC N
Sbjct: 134 TIYLHFNEENNTVVGSFSLKWNIKRADLFSETKNIAINNLIHTFCKN 180


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,881,185
Number of Sequences: 1657284
Number of extensions: 4794274
Number of successful extensions: 9214
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9213
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)