Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0259
         (427 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   2.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   2.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   2.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   5.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   5.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.6  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 214 LFIFCSKDIVLSYIVLGIL 158
           +FIFCS  I+++ + + IL
Sbjct: 89  VFIFCSAPIIITILDIEIL 107


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 200 LQRYCIKLYCTRYIIM 153
           LQ Y + L+C  Y+++
Sbjct: 166 LQAYTLHLFCVLYVVL 181


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 200 LQRYCIKLYCTRYIIM 153
           LQ Y + L+C  Y+++
Sbjct: 166 LQAYTLHLFCVLYVVL 181


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 126 FNLPNSVIVNFQLT*DYNISSQN 58
           +N+P++ +V   L  ++N S+QN
Sbjct: 441 WNMPSTSVVGDMLNMNWNPSAQN 463


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -1

Query: 250 TKKVKLAEQKYFLFIFCSKDIVLSYIVL 167
           T+ + L+   YF+F+ CS  + +++I L
Sbjct: 387 TRGLILSFVDYFVFLLCSILVNIAFIKL 414



 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 98  FTITEFGKLNIKLIHIIFAL 157
           F + EF +LN  + H++  L
Sbjct: 461 FQLCEFSRLNFSVEHLLMEL 480


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = +3

Query: 195 LEQKIKRKYFCSANLTFLVSAYFHIFCGN**EGY*KKYRIKNF 323
           ++ ++ +K+  S  + F+ S  F +   N  E Y +  + K+F
Sbjct: 1   MQHEVVKKFLHSVRIVFVQSEIFCLVNFNHRESYFRLSKAKSF 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,494
Number of Sequences: 336
Number of extensions: 1450
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)