Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0259
         (427 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0043 - 12741661-12741816,12741980-12742153,12742870-127429...    27   8.3  

>07_03_0043 -
           12741661-12741816,12741980-12742153,12742870-12742932,
           12744107-12744214,12744303-12744418,12745188-12745314,
           12746423-12746592,12747409-12747487,12747558-12747669,
           12748064-12748154,12748425-12748534,12748536-12748666,
           12749557-12749817
          Length = 565

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 279 FRKICENKPTLKRLNWPN 226
           F+++ +NKP  +R  WPN
Sbjct: 316 FKEVLKNKPDFRRKPWPN 333


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,743,115
Number of Sequences: 37544
Number of extensions: 98244
Number of successful extensions: 136
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)