Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0259
         (427 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    29   0.029
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    22   3.3  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   4.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   5.8  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 28.7 bits (61), Expect = 0.029
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 89  NWKFTITEFGKLNIKLIHIIFAL 157
           +W F +T++GK  IKL+ II  L
Sbjct: 232 DWLFNLTKYGKNQIKLLEIIHGL 254


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 221 IFSFYFLLQRYCIKLYCTRYIIMQK*CESI 132
           + + YF+     IK  C R++I    C  I
Sbjct: 16  LITSYFVTPTMSIKCNCKRHVIKPHICRKI 45


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 252 TLKRLNWPNKNI 217
           T+ +LNWP K +
Sbjct: 216 TMVKLNWPKKRV 227


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -1

Query: 151 KNNVNQFYI*FTEL 110
           K NVN+FY+ F++L
Sbjct: 290 KLNVNEFYMAFSKL 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,381
Number of Sequences: 438
Number of extensions: 1548
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)