Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0257
(721 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 287 6e-78
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 282 2e-76
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 277 7e-75
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 178 3e-45
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 165 4e-41
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 133 2e-31
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 126 2e-29
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 124 7e-29
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 123 2e-28
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 4e-28
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 122 4e-28
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 9e-28
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 2e-27
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 94 9e-20
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 87 1e-17
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 77 2e-14
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 76 3e-14
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 71 9e-13
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 65 6e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 50 2e-06
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 49 3e-06
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 46 4e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 44 9e-05
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 31 0.94
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 1.2
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 30 2.2
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 28 8.8
SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7) 28 8.8
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 287 bits (704), Expect = 6e-78
Identities = 132/149 (88%), Positives = 137/149 (91%)
Frame = +2
Query: 38 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 217
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 218 NEASGGQVRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAE 397
NEA+GG+ +LVDLEPGTMDSVRSGPFGQIFRP NFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 265 NEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 324
Query: 398 LVDSVLDVVRKEAESCDCLQGFQLTHSLG 484
LVDSVLDVVRKEAESCDCLQGFQLTHSLG
Sbjct: 325 LVDSVLDVVRKEAESCDCLQGFQLTHSLG 353
Score = 117 bits (282), Expect = 8e-27
Identities = 55/60 (91%), Positives = 56/60 (93%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDE YCIDN L
Sbjct: 361 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 420
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 282 bits (692), Expect = 2e-76
Identities = 128/140 (91%), Positives = 132/140 (94%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 244
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 245 APRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 424
+LVDLEPGTMDSVRSGPFGQIFRP NFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 425 RKEAESCDCLQGFQLTHSLG 484
RKEAESCDCLQGFQLTHSLG
Sbjct: 121 RKEAESCDCLQGFQLTHSLG 140
Score = 117 bits (282), Expect = 8e-27
Identities = 55/60 (91%), Positives = 56/60 (93%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDE YCIDN L
Sbjct: 148 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 207
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 277 bits (679), Expect = 7e-75
Identities = 124/140 (88%), Positives = 132/140 (94%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 244
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 245 APRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 424
+L+DLEPGTMDSVRSGPFGQIFRP NFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 425 RKEAESCDCLQGFQLTHSLG 484
RKEAESCDC+QGFQLTHSLG
Sbjct: 121 RKEAESCDCIQGFQLTHSLG 140
Score = 117 bits (281), Expect = 1e-26
Identities = 54/60 (90%), Positives = 56/60 (93%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LLISKIREEYPDRIMNT+S+VPSPKVSDTVVEPYNATLSVHQLVENTDE YCIDN L
Sbjct: 148 GTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 207
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 178 bits (434), Expect = 3e-45
Identities = 80/92 (86%), Positives = 84/92 (91%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 244
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 245 APRLLVDLEPGTMDSVRSGPFGQIFRPXNFVF 340
+LVDLEPGTMDSVRSGPFGQIFRP NFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 165 bits (400), Expect = 4e-41
Identities = 76/80 (95%), Positives = 78/80 (97%), Gaps = 1/80 (1%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 424
PR +LVDLEPGTMDSVRSGPFGQIFRP NFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 6 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 65
Query: 425 RKEAESCDCLQGFQLTHSLG 484
RKEAESCDC+QGFQLTHSLG
Sbjct: 66 RKEAESCDCIQGFQLTHSLG 85
Score = 113 bits (272), Expect = 1e-25
Identities = 53/58 (91%), Positives = 54/58 (93%)
Frame = +3
Query: 510 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
LLI KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDE YCIDN L
Sbjct: 95 LLILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 152
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 133 bits (321), Expect = 2e-31
Identities = 57/86 (66%), Positives = 70/86 (81%)
Frame = +2
Query: 227 SGGQVRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVD 406
+GG+ +LVDLEPGTMD+VR GP G +FRP NFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 407 SVLDVVRKEAESCDCLQGFQLTHSLG 484
++ DV+RKEAE+CDC+QG QL +LG
Sbjct: 71 NIFDVLRKEAENCDCMQGVQLIQALG 96
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKV 587
G L++SKIREEYPDRI++ +SVVPSPKV
Sbjct: 104 GTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 126 bits (303), Expect = 2e-29
Identities = 62/142 (43%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 238
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 239 VRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 418
+ VDLEP +D VR+G + Q+F P V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 419 VVRKEAESCDCLQGFQLTHSLG 484
+RK A+ C LQGF + HS G
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFG 142
Score = 123 bits (297), Expect = 1e-28
Identities = 60/141 (42%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 241
RE + I GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 242 RAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 421
+ VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 422 VRKEAESCDCLQGFQLTHSLG 484
+RK A+ C LQGF + HS G
Sbjct: 555 IRKLADQCTGLQGFLIFHSFG 575
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DN
Sbjct: 149 FSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 208
Query: 681 L 683
+
Sbjct: 209 I 209
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DN
Sbjct: 582 FSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 641
Query: 681 L 683
+
Sbjct: 642 I 642
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 124 bits (299), Expect = 7e-29
Identities = 60/142 (42%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 238
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 239 VRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 418
+ VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 419 VVRKEAESCDCLQGFQLTHSLG 484
+RK A+ C LQGF + HS G
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFG 727
Score = 122 bits (295), Expect = 2e-28
Identities = 59/141 (41%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 241
RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 242 RAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 421
+ VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 185
Query: 422 VRKEAESCDCLQGFQLTHSLG 484
+RK A+ C LQGF + HS G
Sbjct: 186 IRKLADQCTGLQGFLIFHSFG 206
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQV 241
RE + I GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 242 RAPRLLVDLEPGTMDSV 292
+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DN
Sbjct: 734 FSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 793
Query: 681 L 683
+
Sbjct: 794 I 794
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/61 (29%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DN
Sbjct: 213 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 272
Query: 681 L 683
+
Sbjct: 273 I 273
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 123 bits (296), Expect = 2e-28
Identities = 59/141 (41%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 241
RE + I GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 242 RAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 421
+ VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 422 VRKEAESCDCLQGFQLTHSLG 484
+RK A+ C LQGF + HS G
Sbjct: 121 IRKLADQCTGLQGFLIFHSFG 141
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/58 (32%), Positives = 37/58 (63%)
Frame = +3
Query: 510 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DN +
Sbjct: 151 LLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 208
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 122 bits (293), Expect = 4e-28
Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 238
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 239 VRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 418
+ DLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 419 VVRKEAESCDCLQGFQLTHSLG 484
+RK A+ C LQGF + HS G
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFG 142
Score = 49.6 bits (113), Expect = 3e-06
Identities = 18/61 (29%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DN
Sbjct: 149 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEA 208
Query: 681 L 683
+
Sbjct: 209 I 209
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 122 bits (293), Expect = 4e-28
Identities = 59/142 (41%), Positives = 81/142 (57%), Gaps = 2/142 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 238
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 239 VRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 418
+ VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 419 VVRKEAESCDCLQGFQLTHSLG 484
RK A+ C LQGF + HS G
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFG 142
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/61 (29%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DN
Sbjct: 149 FASLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 208
Query: 681 L 683
+
Sbjct: 209 I 209
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 120 bits (290), Expect = 9e-28
Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 241
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 242 RAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 421
+ VDLEP +D +R+G + Q+F P + G+ A NN+A+GHYT G + +D+VLD
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 422 VRKEAESCDCLQGFQLTHSLG 484
+RK A+ C LQGF + HS G
Sbjct: 540 IRKLADQCSGLQGFLVFHSFG 560
Score = 103 bits (247), Expect = 1e-22
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
Frame = +2
Query: 110 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQVRAPRLLVDLEPGTM 283
+G WE+ EHGI P G D + + N +++E G+ + DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 284 DSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 463
D VR+G + Q+F P + G+ A NN+A+GHYT G +L++ VLD +RK A+ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 464 QLTHSLG 484
+ HS G
Sbjct: 121 LIFHSFG 127
Score = 49.6 bits (113), Expect = 3e-06
Identities = 18/61 (29%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DN
Sbjct: 567 FSALLLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEA 626
Query: 681 L 683
+
Sbjct: 627 I 627
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/61 (29%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DN
Sbjct: 134 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 193
Query: 681 L 683
+
Sbjct: 194 I 194
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 120 bits (288), Expect = 2e-27
Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 241
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 242 RAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 421
+ DLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E++D VLD
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 422 VRKEAESCDCLQGFQLTHSLG 484
+RK A+ C LQGF + HS G
Sbjct: 926 IRKLADQCTGLQGFLIFHSFG 946
Score = 119 bits (287), Expect = 2e-27
Identities = 59/141 (41%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 241
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E G+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 242 RAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 421
+ VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 422 VRKEAESCDCLQGFQLTHSLG 484
+RK A+ C LQGF + HS G
Sbjct: 493 LRKLADGCTGLQGFLIFHSFG 513
Score = 48.4 bits (110), Expect = 6e-06
Identities = 18/58 (31%), Positives = 37/58 (63%)
Frame = +3
Query: 510 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DN +
Sbjct: 956 LLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 1013
Score = 48.0 bits (109), Expect = 8e-06
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 510 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
LL+ ++ +Y + +++ P+P +S VVEPYN+ L+ H +E++D + +DN +
Sbjct: 523 LLMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 580
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 94.3 bits (224), Expect = 9e-20
Identities = 54/142 (38%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 238
MRE + I GQ G QIG WE+ EHGI P G D + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 239 VRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 418
+ VDLEP + P + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 419 VVRKEAESCDCLQGFQLTHSLG 484
+RK A+ C LQGF + HS G
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFG 132
Score = 48.0 bits (109), Expect = 8e-06
Identities = 18/61 (29%), Positives = 37/61 (60%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + ++V P+P ++ VVEPYN+ L+ H +E++D + +DN
Sbjct: 139 FSSLLMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTLEHSDCAFMVDNEA 198
Query: 681 L 683
+
Sbjct: 199 I 199
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/96 (40%), Positives = 57/96 (59%)
Frame = +2
Query: 197 ERINVYYNEASGGQVRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKG 376
+ N ++ E G+ + VDLEP +D +R+G + Q+F P + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 377 HYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLG 484
HYT G E +D LD +RK A+ C LQGF + HS G
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFG 107
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/61 (32%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + ++V P+P++S VVEPYN+ LS H +E++D + +DN
Sbjct: 114 FSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTLEHSDCAFMVDNEA 173
Query: 681 L 683
+
Sbjct: 174 I 174
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 87.4 bits (207), Expect = 1e-17
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LL+SKIREEYPDR+++++ V+PSP VS+TV EPYNATLS HQLV+ D CIDN L
Sbjct: 56 GSLLLSKIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDVADAAICIDNEAL 115
Score = 76.2 bits (179), Expect = 3e-14
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +2
Query: 344 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLG 484
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ+ HSLG
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLG 48
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 87.4 bits (207), Expect = 1e-17
Identities = 38/89 (42%), Positives = 57/89 (64%)
Frame = +2
Query: 218 NEASGGQVRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAE 397
+EA+ G+ +LVDLEP +D VR+G + ++ P + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 398 LVDSVLDVVRKEAESCDCLQGFQLTHSLG 484
+V+ V+D +RK + C LQGF + HS G
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHSFG 1053
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ L+ + +Y + ++V P+P +S VVEPYN+ L+ H +E++D + +DN
Sbjct: 1060 FASLITEHLSVDYGKKSKLEFAVYPAPHISTAVVEPYNSVLTTHTTLEHSDCTFMVDNEA 1119
Query: 681 L 683
+
Sbjct: 1120 I 1120
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 79.0 bits (186), Expect = 4e-15
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +2
Query: 284 DSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 463
D VR+G + Q+F P + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 464 QLTHSLG 484
+ HS G
Sbjct: 73 LIFHSFG 79
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/61 (29%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DN
Sbjct: 86 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 145
Query: 681 L 683
+
Sbjct: 146 I 146
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 76.6 bits (180), Expect = 2e-14
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = +2
Query: 290 VRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 469
VR+G + Q+F P + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 470 THSLG 484
HS G
Sbjct: 63 FHSFG 67
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/61 (29%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DN
Sbjct: 74 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 133
Query: 681 L 683
+
Sbjct: 134 I 134
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 75.8 bits (178), Expect = 3e-14
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDE 656
G L++ ++EEYPDRI+++ SV PSP+VS+ VVEPYNA LSVHQL+E TDE
Sbjct: 29 GTLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQLLETTDE 79
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +2
Query: 422 VRKEAESCDCLQGFQLTHSLG 484
+RKEAE CD +QGFQL HSLG
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLG 21
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 70.9 bits (166), Expect = 9e-13
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +2
Query: 290 VRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 469
+R+G + Q+F P + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 470 THSLG 484
HS G
Sbjct: 63 FHSFG 67
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + ++V P+P++S VVEPYN+ L+ H +E++D + +DN
Sbjct: 74 FSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 133
Query: 681 L 683
+
Sbjct: 134 I 134
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 64.9 bits (151), Expect = 6e-11
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Frame = +2
Query: 74 IVHIQAGQCGNQIGAKFWEIISDE------HGIDPTGAYHGDSDLQLERINVYYNEASGG 235
IV +Q GQCGNQIG + +++I ++ + ++ + E + ++ +
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 236 QVRAPRLLVDLEPGTMDSVRS--GPFGQIFRPXNFVFGQS-GAGNNWAKGHYTEGAELVD 406
+ A + +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 407 SVLDVVRKEAESCDCLQGFQLTHSL 481
VLD+V++E E CD L GF SL
Sbjct: 123 KVLDLVQREVEKCDRLDGFLTLLSL 147
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +2
Query: 290 VRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 430
VR+G + Q+F P + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGQ 238
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GG+
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 239 VRAPRLLVDLEPGTMDSVR 295
+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/61 (32%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y R ++V P+P++S VVEPYN+ L+ H +E++D + +DN
Sbjct: 280 FSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 339
Query: 681 L 683
+
Sbjct: 340 I 340
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 232
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 233 GQ 238
G+
Sbjct: 254 GK 255
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 290 VRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 430
VR G + +F P + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/61 (29%), Positives = 38/61 (62%)
Frame = +3
Query: 501 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DN
Sbjct: 24 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 83
Query: 681 L 683
+
Sbjct: 84 I 84
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 45.6 bits (103), Expect = 4e-05
Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Frame = +2
Query: 83 IQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPRLLV 262
+ GQCGNQIG + ++ + P H D G++R + V
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRD-----------------GKLRC--VCV 44
Query: 263 DLEPGTMDSVR--SGPFGQIFRPXNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDV 421
D E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 45 DSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDA 103
Query: 422 VRKEAESCDCLQGFQLTHSL 481
+RKE E CD G + HSL
Sbjct: 104 MRKEVERCDSFAGTIVMHSL 123
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
G L+ + + YP + + SV SP VS ++ ++ YN+ LS+ L N D N
Sbjct: 132 GARLVETLSDAYP--LAHVMSVAVSPHVSGESPLQHYNSLLSLAALQRNADGILLFHNDD 189
Query: 681 LLRYLL 698
+LR ++
Sbjct: 190 VLRQVM 195
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 122 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 223
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G +++ + ++YPD T +V PS D + PYN+ L++HQL E+ D I+N L
Sbjct: 162 GTYVLNLLHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQAL 220
Query: 684 L 686
+
Sbjct: 221 V 221
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +2
Query: 191 QLERINVYYNEASGGQVRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNW 367
+L+ I V ++ ++A +L+D+E G ++++ GP +F + SG GNNW
Sbjct: 57 RLKDIPVGNSKGKIKSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 525 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDN 674
+ ++YPD T +V PS D + PYN+ L++HQL E+ D I+N
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIEN 69
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 576 SPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGLLR 689
S +SD VV+PYN+ L++ +L +N D +DN L R
Sbjct: 211 SEDISDVVVQPYNSILTLKRLTQNADCVVVLDNTALNR 248
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = -1
Query: 460 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVXRTEDLSERSRADRVH 281
S++A R R +S V I +L V++L PV+ G +++D + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 280 GAGL 269
G+
Sbjct: 264 RCGI 267
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 441 DSASFRTTSKTESTSSAPSV*CPLAQL 361
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +3
Query: 495 FRYGHLLISKIREEYPDRI-MNTYSVVPS-PKVSDTVVEPYNATLSVHQLVE 644
FR + +SKI EY + + + + V+P PK+ D + +P+ L V QL+E
Sbjct: 17 FRSHVICVSKIILEYKEPMAICSQRVLPDWPKIGDRITQPFLDQLMVSQLLE 68
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 378 CPLAQLLPAPDCPKTKLXGRKICP 307
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 378 CPLAQLLPAPDCPKTKLXGRKICP 307
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 378 CPLAQLLPAPDCPKTKLXGRKICP 307
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 378 CPLAQLLPAPDCPKTKLXGRKICP 307
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 378 CPLAQLLPAPDCPKTKLXGRKICP 307
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 378 CPLAQLLPAPDCPKTKLXGRKICP 307
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 378 CPLAQLLPAPDCPKTKLXGRKICP 307
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 378 CPLAQLLPAPDCPKTKLXGRKICP 307
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 516 ISKIREEYPDRIMNTYSVVPSPKVS 590
+ K++E+YPD I++++ + P K S
Sbjct: 484 LKKLQEQYPDHILSSFELFPCEKAS 508
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 354 APDCPKTKLXGRKICPKGPERTESMVPGSKST 259
A DCP ++ GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7)
Length = 300
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 179 DSDLQLERINVYYNEASGGQVRAPRLLVDLEPGTMDSV 292
D+D ++ + VYYN +S G++ + LVD P + V
Sbjct: 7 DNDYYMQCLTVYYNGSSAGEILC-KSLVDKIPDALQRV 43
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,522,467
Number of Sequences: 59808
Number of extensions: 446549
Number of successful extensions: 1291
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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