Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0257
(721 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 261 3e-70
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 258 3e-69
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 258 3e-69
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 258 4e-69
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 258 4e-69
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 255 2e-68
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 255 2e-68
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 254 4e-68
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 254 6e-68
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 124 5e-29
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 123 1e-28
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 123 1e-28
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 120 1e-27
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 120 1e-27
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 118 5e-27
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 118 5e-27
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 105 3e-23
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 105 4e-23
At4g37190.1 68417.m05265 expressed protein 31 0.77
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.77
At5g24010.1 68418.m02821 protein kinase family protein contains ... 29 3.1
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 4.1
At4g36610.1 68417.m05196 hydrolase, alpha/beta fold family prote... 28 7.2
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 9.5
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 27 9.5
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 261 bits (640), Expect = 3e-70
Identities = 115/141 (81%), Positives = 130/141 (92%), Gaps = 1/141 (0%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 241
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 242 RAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 421
+L+DLEPGTMDS+RSGP+GQIFRP NFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 422 VRKEAESCDCLQGFQLTHSLG 484
VRKEAE+CDCLQGFQ+ HSLG
Sbjct: 121 VRKEAENCDCLQGFQVCHSLG 141
Score = 100 bits (240), Expect = 8e-22
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN L
Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 208
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 258 bits (632), Expect = 3e-69
Identities = 113/140 (80%), Positives = 128/140 (91%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 244
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 245 APRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 424
+L+DLEPGTMDSVR+GP+GQIFRP NFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 425 RKEAESCDCLQGFQLTHSLG 484
RKEAE+CDCLQGFQ+ HSLG
Sbjct: 121 RKEAENCDCLQGFQVCHSLG 140
Score = 100 bits (240), Expect = 8e-22
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN L
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 258 bits (632), Expect = 3e-69
Identities = 116/141 (82%), Positives = 128/141 (90%), Gaps = 1/141 (0%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 241
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 242 RAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 421
+L+DLEPGTMDS+RSGPFGQIFRP NFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 422 VRKEAESCDCLQGFQLTHSLG 484
VRKEAE+CDCLQGFQ+ HSLG
Sbjct: 121 VRKEAENCDCLQGFQVCHSLG 141
Score = 100 bits (240), Expect = 8e-22
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN L
Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 208
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 258 bits (631), Expect = 4e-69
Identities = 115/140 (82%), Positives = 126/140 (90%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 244
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 245 APRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 424
+L+DLEPGTMDS+RSGP+GQ FRP NFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 RKEAESCDCLQGFQLTHSLG 484
RKEAE+CDCLQGFQ+ HSLG
Sbjct: 121 RKEAENCDCLQGFQVCHSLG 140
Score = 100 bits (240), Expect = 8e-22
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN L
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 258 bits (631), Expect = 4e-69
Identities = 115/140 (82%), Positives = 126/140 (90%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 244
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 245 APRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 424
+L+DLEPGTMDS+RSGP+GQ FRP NFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 RKEAESCDCLQGFQLTHSLG 484
RKEAE+CDCLQGFQ+ HSLG
Sbjct: 121 RKEAENCDCLQGFQVCHSLG 140
Score = 100 bits (240), Expect = 8e-22
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN L
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 255 bits (625), Expect = 2e-68
Identities = 113/140 (80%), Positives = 126/140 (90%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 244
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 245 APRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 424
+L+DLEPGTMDSVRSGP+GQIFRP NFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 RKEAESCDCLQGFQLTHSLG 484
RKEAE+CDCLQGFQ+ HSLG
Sbjct: 121 RKEAENCDCLQGFQVCHSLG 140
Score = 100 bits (240), Expect = 8e-22
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN L
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 255 bits (625), Expect = 2e-68
Identities = 115/140 (82%), Positives = 126/140 (90%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 244
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 245 APRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 424
+L+DLEPGTMDS+RSGPFGQIFRP NFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 RKEAESCDCLQGFQLTHSLG 484
RKEAE+CDCLQGFQ+ HSLG
Sbjct: 121 RKEAENCDCLQGFQVCHSLG 140
Score = 101 bits (241), Expect = 6e-22
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN L
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 254 bits (622), Expect = 4e-68
Identities = 113/140 (80%), Positives = 127/140 (90%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 244
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 245 APRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 424
+L+DLEPGTMDSVRSGP+GQIFRP NFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 RKEAESCDCLQGFQLTHSLG 484
RKEAE+CDCLQGFQ+ HSLG
Sbjct: 121 RKEAENCDCLQGFQVCHSLG 140
Score = 101 bits (241), Expect = 6e-22
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN L
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 254 bits (621), Expect = 6e-68
Identities = 115/140 (82%), Positives = 126/140 (90%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 244
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 245 APRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 424
+L+DLEPGTMDS+RSGPFGQIFRP NFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 RKEAESCDCLQGFQLTHSLG 484
RKEAE+ DCLQGFQ+ HSLG
Sbjct: 121 RKEAENSDCLQGFQVCHSLG 140
Score = 101 bits (241), Expect = 6e-22
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN L
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 124 bits (300), Expect = 5e-29
Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 238
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S GQ
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 239 VRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 418
+ +DLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 419 VVRKEAESCDCLQGFQLTHSLG 484
+RK A++C LQGF + +++G
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVG 142
Score = 54.8 bits (126), Expect = 5e-08
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LL+ ++ ++ + +++ PSP+VS VVEPYN+ LS H L+E+TD +DN +
Sbjct: 150 GSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAI 209
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 123 bits (297), Expect = 1e-28
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 238
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 239 VRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 418
+ VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 419 VVRKEAESCDCLQGFQLTHSLG 484
VRK A++C LQGF + +++G
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVG 142
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LL+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DN +
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAI 209
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 123 bits (297), Expect = 1e-28
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 238
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 239 VRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 418
+ VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 419 VVRKEAESCDCLQGFQLTHSLG 484
VRK A++C LQGF + +++G
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVG 142
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LL+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DN +
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAI 209
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 120 bits (289), Expect = 1e-27
Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 2/142 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 238
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 239 VRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 418
+ VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 419 VVRKEAESCDCLQGFQLTHSLG 484
+RK A++C LQGF + +++G
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVG 142
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD +DN +
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 120 bits (289), Expect = 1e-27
Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 2/142 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 238
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 239 VRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 418
+ VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 419 VVRKEAESCDCLQGFQLTHSLG 484
+RK A++C LQGF + +++G
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVG 142
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD +DN +
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 118 bits (283), Expect = 5e-27
Identities = 57/142 (40%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 238
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 239 VRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 418
+ VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 419 VVRKEAESCDCLQGFQLTHSLG 484
+RK A++C LQGF + +++G
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVG 142
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD +DN +
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 118 bits (283), Expect = 5e-27
Identities = 57/142 (40%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 238
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 239 VRAPRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 418
+ VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 419 VVRKEAESCDCLQGFQLTHSLG 484
+RK A++C LQGF + +++G
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVG 142
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDEXYCIDNXGL 683
G LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD +DN +
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 105 bits (252), Expect = 3e-23
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 247
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 248 PRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 421
LL+DLEP ++ +++G + ++ N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 422 VRKEAESCDCLQGFQLTHSL 481
+ +EA+ D L+GF L HS+
Sbjct: 122 IDREADGSDSLEGFVLCHSI 141
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
G L+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN
Sbjct: 150 GSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTA 209
Query: 681 LLR 689
L R
Sbjct: 210 LNR 212
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 105 bits (251), Expect = 4e-23
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 247
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 248 PRLLVDLEPGTMDSVRSGPFGQIFRPXNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 421
LL+DLEP ++ +++G + ++ N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 422 VRKEAESCDCLQGFQLTHSL 481
+ +EA+ D L+GF L HS+
Sbjct: 122 IDREADGSDSLEGFVLCHSI 141
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 504 GHLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDEXYCIDNXG 680
G L+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN
Sbjct: 150 GSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTA 209
Query: 681 LLR 689
L R
Sbjct: 210 LGR 212
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 31.1 bits (67), Expect = 0.77
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASGG 235
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 236 QVRAPRLL-VDLEP--GTMDS 289
PRL+ V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +2
Query: 398 LVDSVLDVVRKEAESCDCLQGFQLTHS 478
+++SV VVRKEAE+C+CLQ F ++ S
Sbjct: 1 MINSV-GVVRKEAENCNCLQVFFVSGS 26
>At5g24010.1 68418.m02821 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 824
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 480 SECVSWNPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQL 361
SE W P R+ S++ RTT +T S+S ++ A+L
Sbjct: 443 SESTGWTPLRRFRGSSNSRTTERTVSSSGYHTLRISFAEL 482
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 473 VSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSC 360
VS G+PG HT P ++ ++ +++ P S PW SC
Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172
>At4g36610.1 68417.m05196 hydrolase, alpha/beta fold family protein
low similarity to
2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase
[Pseudomonas fluorescens] GI:1871461; contains Pfam
profile PF00561: hydrolase, alpha/beta fold family
Length = 317
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 495 FRYGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVE 605
F YG ++ KI E YPD + P ++DT+ E
Sbjct: 134 FSYGGMVAFKIAEAYPDMVRAIVVSGSIPTMTDTINE 170
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 71 EIVHIQAGQCGNQIGAKFWEIISD 142
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -1
Query: 247 GTYLPAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFP 68
G + AGGF + I + + ++ VP G VL+GD DL A L + FP
Sbjct: 132 GFHKAAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFP 190
Query: 67 HFVL 56
+L
Sbjct: 191 DGIL 194
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,901,795
Number of Sequences: 28952
Number of extensions: 305868
Number of successful extensions: 941
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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