Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0256
(682 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 80 2e-17
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 24 1.3
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 23 2.3
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 23 3.1
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 23 3.1
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 23 3.1
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 7.1
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 7.1
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 9.3
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 9.3
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 79.8 bits (188), Expect = 2e-17
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 4/86 (4%)
Frame = +2
Query: 8 GVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKII-EQIRP---D 175
G I++ATPGRL DF+ +G Y VLDEADRMLDMG + +++ Q P +
Sbjct: 285 GCHILVATPGRLKDFVNRGNVSFNSLKYFVLDEADRMLDMGFLGDVEEMLSHQSMPATGE 344
Query: 176 RQTLMWSATWPKEVKKLAEDYLGDYI 253
RQTLM+SAT+P+EV++LA +L +YI
Sbjct: 345 RQTLMFSATFPEEVQQLAGKFLLNYI 370
Score = 50.8 bits (116), Expect = 1e-08
Identities = 33/113 (29%), Positives = 58/113 (51%)
Frame = +1
Query: 328 EKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERD 507
+K +KL +L++ P +T+IFVETKR A+ ++ + + +HGD+ Q ER+
Sbjct: 395 DKRSKLVSILEKA-----PNERTLIFVETKRNADFLATFLSEQNIQSTSIHGDRYQSERE 449
Query: 508 EFCISSRKVVPVFL*QLMLQLEGLDVDGIQYVIKX*LSKFVRGFTSIVLGRTG 666
+ + + L + GLD+ +Q+VI L K + + + GRTG
Sbjct: 450 KALLDFKTGHRKVLVATGVAARGLDIKDVQHVINYDLPKSIDEYVHRI-GRTG 501
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 23.8 bits (49), Expect = 1.3
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 175 QTDFDVVSYLAQRSEETC*GLLGRLHSINIGSLQLSANHNILQIVDIC-QEHEK 333
+T F V + + +R +L +L+ L + + QIVDIC + H+K
Sbjct: 469 ETQFVVANIILRRRFALINSILRKLYKNKYRKLIVDGKKSEEQIVDICIRSHDK 522
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 635 GLHPSYWGELGR 670
G HP+Y+G+ GR
Sbjct: 301 GPHPTYFGKTGR 312
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 623 NSSEGLHPSYWGELG 667
N + G H +WG+LG
Sbjct: 192 NGTPGGHSGFWGQLG 206
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 400 IFVETKRKAENISRNIRRYGWPAVC 474
IFV+++ I N+ W AVC
Sbjct: 221 IFVKSRPSPATIISNVTVISWQAVC 245
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 400 IFVETKRKAENISRNIRRYGWPAVC 474
IFV+++ I N+ W AVC
Sbjct: 221 IFVKSRPSPATIISNVTVISWQAVC 245
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 400 IFVETKRKAENISRNIRRYGWPAVC 474
IFV+++ I N+ W AVC
Sbjct: 541 IFVKSRPSPATIISNVTVISWQAVC 565
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/29 (24%), Positives = 17/29 (58%)
Frame = -1
Query: 418 SWFQQKLLFSHQVLDFVQFLAIIHLIYFL 332
SW + K F +++ F++ + + +YF+
Sbjct: 419 SWLKSKKEFKEELIKFIEEMLQRNDVYFV 447
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/29 (24%), Positives = 17/29 (58%)
Frame = -1
Query: 418 SWFQQKLLFSHQVLDFVQFLAIIHLIYFL 332
SW + K F +++ F++ + + +YF+
Sbjct: 426 SWLKSKKEFKEELIKFIEEMLQRNDVYFV 454
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.0 bits (42), Expect = 9.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 445 IRRYGWPAVCMHGDKTQQERD 507
+RRYGW A K Q RD
Sbjct: 590 MRRYGWTANMERIMKAQALRD 610
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -1
Query: 427 QLFSWFQQKLLFSHQVLDFVQFLAIIH 347
Q+F W Q++ +H V F+ H
Sbjct: 791 QIFDWVQKEQSLAHSVGVFLTIFNAAH 817
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,855
Number of Sequences: 336
Number of extensions: 3606
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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