Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0256
(682 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 146 2e-35
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 3e-22
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 4e-21
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 4e-20
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 8e-16
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 70 2e-12
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 70 2e-12
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 70 2e-12
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 69 4e-12
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 69 5e-12
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 67 1e-11
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 6e-11
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 61 9e-10
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 61 9e-10
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 58 5e-09
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 54 8e-08
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 51 8e-07
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 47 2e-05
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 47 2e-05
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 43 3e-04
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 42 3e-04
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 42 5e-04
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 38 0.006
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 36 0.040
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 31 0.65
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 31 0.86
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 31 0.86
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_11957| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 30 1.5
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 29 2.6
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 146 bits (353), Expect = 2e-35
Identities = 68/84 (80%), Positives = 73/84 (86%)
Frame = +2
Query: 2 ERGVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQIRPDRQ 181
ERGVEI IATPGRLID LE T L+RCTYLVLDEADRMLDMG EPQIR II+QIRPDRQ
Sbjct: 180 ERGVEICIATPGRLIDMLESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQ 239
Query: 182 TLMWSATWPKEVKKLAEDYLGDYI 253
TLMWSATWPKEV+ LA D+L DY+
Sbjct: 240 TLMWSATWPKEVQGLAHDFLSDYV 263
Score = 64.9 bits (151), Expect = 6e-11
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +1
Query: 256 INIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENI 435
I +GSL L+ANH ILQIVD+C++HEKE+ + + G +T+IF ETKR+A+ +
Sbjct: 265 ITVGSLGLTANHKILQIVDVCEDHEKEHNVGSFIG--GIVILSSLQTLIFTETKRRADEL 322
Query: 436 SRNIRRYG 459
+R +R G
Sbjct: 323 TRKLRSDG 330
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 102 bits (244), Expect = 3e-22
Identities = 46/88 (52%), Positives = 67/88 (76%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 ERGVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQI----R 169
+ G +++ TPGRL DF+EKG L+ +L+LDEADRMLDMG EP IR+I+E + +
Sbjct: 836 QSGCNLLVGTPGRLTDFIEKGKVSLKGLQFLILDEADRMLDMGFEPAIRRIVESMGMPDK 895
Query: 170 PDRQTLMWSATWPKEVKKLAEDYLGDYI 253
+RQTLM+SAT+P+E+++LA D+L DY+
Sbjct: 896 SERQTLMFSATFPEEIQRLAGDFLNDYL 923
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/125 (31%), Positives = 66/125 (52%)
Frame = +1
Query: 292 NILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAV 471
+I Q V ++EK ++L +L + G +T++FVE+KR A+ ++ + G+P
Sbjct: 936 DIEQTVIEVTDNEKRDRLTQILGDAGTD-----RTLVFVESKRSADFLAIFLSGEGFPTT 990
Query: 472 CMHGDKTQQERDEFCISSRKVVPVFL*QLMLQLEGLDVDGIQYVIKX*LSKFVRGFTSIV 651
+HGD+ QQER+E RK L + GLD+D +++VI L + + +
Sbjct: 991 SIHGDRLQQEREEALDDFRKGRCPVLIATNVAARGLDIDDVKHVINFDLPSDIDEYVHRI 1050
Query: 652 LGRTG 666
GRTG
Sbjct: 1051 -GRTG 1054
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 98.7 bits (235), Expect = 4e-21
Identities = 48/88 (54%), Positives = 66/88 (75%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 ERGVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQ-IRPD- 175
+R +++ATPGRL+D +++G L +LVLDEADRMLDMG EPQIR+I++Q P
Sbjct: 973 DRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKT 1032
Query: 176 --RQTLMWSATWPKEVKKLAEDYLGDYI 253
RQTLM+SAT+PKE++ LA D+L +YI
Sbjct: 1033 GIRQTLMFSATFPKEIQMLARDFLENYI 1060
Score = 54.8 bits (126), Expect = 6e-08
Identities = 39/129 (30%), Positives = 64/129 (49%)
Frame = +1
Query: 280 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 459
S + NI Q V E +K + L LL G Q T++FVETK+ A+ + + + G
Sbjct: 1069 STSENITQKVVWVDEFDKRSFLLDLLNASGPQQ----LTLVFVETKKGADALEMFLAKDG 1124
Query: 460 WPAVCMHGDKTQQERDEFCISSRKVVPVFL*QLMLQLEGLDVDGIQYVIKX*LSKFVRGF 639
+ +HGD++Q+ER+E + R L + GLD+ +++VI L + +
Sbjct: 1125 YYCTSIHGDRSQREREEALRTFRCGDTPILVATAVAARGLDIPNVKHVINFDLPTDIEEY 1184
Query: 640 TSIVLGRTG 666
+ GRTG
Sbjct: 1185 VHRI-GRTG 1192
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 95.5 bits (227), Expect = 4e-20
Identities = 51/91 (56%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = +2
Query: 2 ERGVEIVIATPGRLIDFLEKGT---TILQRCTYLVLDEADRMLDMGXEPQIRK------- 151
+RG EI++ TPGR+ID L T QRCTYLVLDEADRM DMG EPQI K
Sbjct: 192 KRGAEIIVCTPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQITKIRYPKVM 251
Query: 152 -IIEQIRPDRQTLMWSATWPKEVKKLAEDYL 241
II+ IRPDRQT+M+SAT+P++++ LA L
Sbjct: 252 RIIDCIRPDRQTVMFSATFPRQMEALARKIL 282
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 81.0 bits (191), Expect = 8e-16
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 5/89 (5%)
Frame = +2
Query: 2 ERGVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQ----IR 169
ERG ++ TPGRL DF+ + L +L+LDEADRMLD+G P I K+IE+ +
Sbjct: 600 ERGCHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRMLDLGFGPDIHKLIEESNMTAK 659
Query: 170 PDRQTLMWSATWPKEVKKLAEDYL-GDYI 253
RQTLM+SAT+P E++ LA +L DY+
Sbjct: 660 ESRQTLMFSATFPDEIQHLAGSFLKPDYL 688
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Frame = +2
Query: 8 GVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKII---EQIRPDR 178
G ++V+ATPGRL+D L + TYLV+DE DRML MG E Q+RKI+ R
Sbjct: 217 GADVVVATPGRLLD--------LYKITYLVMDEPDRMLGMGMEEQLRKIVGLATGTSRAR 268
Query: 179 QTLMWSATWPKEVKKLA 229
QTL+WSAT P+ +++LA
Sbjct: 269 QTLLWSATLPESLERLA 285
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +3
Query: 462 ASCLHAWR*NSTRKR*VLYQFKEGRASILVATDVAARG 575
AS LH+ + R + ++ F++G+ ILVATDVA+RG
Sbjct: 359 ASGLHSEKPQDYRFK-LVKAFRDGKVDILVATDVASRG 395
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/77 (37%), Positives = 52/77 (67%)
Frame = +2
Query: 11 VEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQIRPDRQTLM 190
V +++ATPGR++D ++K + +C LV+DEAD++L M + + +II+ + +RQ L+
Sbjct: 173 VHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILL 232
Query: 191 WSATWPKEVKKLAEDYL 241
+SAT+P V+ E +L
Sbjct: 233 FSATFPISVRDFKEKHL 249
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/77 (37%), Positives = 52/77 (67%)
Frame = +2
Query: 11 VEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQIRPDRQTLM 190
V +++ATPGR++D ++K + +C LV+DEAD++L M + + +II+ + +RQ L+
Sbjct: 173 VHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILL 232
Query: 191 WSATWPKEVKKLAEDYL 241
+SAT+P V+ E +L
Sbjct: 233 FSATFPISVRDFKEKHL 249
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 69.3 bits (162), Expect = 3e-12
Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +2
Query: 2 ERGVEIVIATPGRLIDFLEKGTTILQR-CTYLVLDEADRMLDMGXEPQIRKIIEQIRPDR 178
++GV ++IATPGRL+D L+ L + LV+DEADR+L++G E ++R+II + R
Sbjct: 692 QKGVNLLIATPGRLLDHLQNTQGFLYKNLQCLVIDEADRILEIGFEEEMRQIIRILPSKR 751
Query: 179 QTLMWSATWPKEVKKLAE 232
QT+++SAT K V+ LA+
Sbjct: 752 QTVLFSATQTKNVEDLAK 769
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 516 YQFKEGRASILVATDVAARGA*C*WYPICN*XLIIQI----RPRVYIHRIG 656
++F ++ IL+ TDVAARG I I+Q P+ YIHR+G
Sbjct: 862 FEFCNAKSGILLCTDVAARG-----LDIPEVDWIVQYDPADDPKEYIHRVG 907
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 68.9 bits (161), Expect = 4e-12
Identities = 29/80 (36%), Positives = 52/80 (65%)
Frame = +2
Query: 2 ERGVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQIRPDRQ 181
E GV++++ATPGR+++ + + L V+DE D ML +G E Q+++I+E++ RQ
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQ 312
Query: 182 TLMWSATWPKEVKKLAEDYL 241
T+++SAT P ++ +A L
Sbjct: 313 TMLFSATIPPSIEAMASRLL 332
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 68.5 bits (160), Expect = 5e-12
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = +2
Query: 17 IVIATPGRLIDFLEKGTTILQRCT---YLVLDEADRMLDMGXEPQIRKIIEQIRPDRQTL 187
IV+ TPGRL+ +++ CT LVLDEADR+LDMG P + IIE + +RQTL
Sbjct: 174 IVVCTPGRLLQHMDETPNF--DCTSLQILVLDEADRILDMGFAPTLNAIIENLPSERQTL 231
Query: 188 MWSATWPKEVKKLAEDYLGDYI 253
++SAT + VK LA L Y+
Sbjct: 232 LYSATQTRSVKDLARLSLQSYV 253
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/83 (38%), Positives = 54/83 (65%), Gaps = 5/83 (6%)
Frame = +2
Query: 8 GVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKII----EQIRPD 175
G+++++ TPGR++DF+ +GT L + ++VLDE DRMLDMG + +++ + R D
Sbjct: 195 GLDVLVGTPGRILDFMRQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDRED 254
Query: 176 R-QTLMWSATWPKEVKKLAEDYL 241
+ QTL++SAT P A+ Y+
Sbjct: 255 KPQTLLFSATLPPWAVNTAKKYM 277
Score = 32.3 bits (70), Expect = 0.37
Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 513 LYQFKEGRASILVATDVAARGA*C*WYPICN*XLIIQIRP----RVYIHRIG 656
L F+EG+ LVATDVAARG I L++Q P YIHR G
Sbjct: 347 LKSFREGKFRCLVATDVAARG-----LDIPEIDLVVQCEPPKDVDAYIHRSG 393
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 64.9 bits (151), Expect = 6e-11
Identities = 39/87 (44%), Positives = 50/87 (57%)
Frame = +2
Query: 2 ERGVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQIRPDRQ 181
+ G EIV+ATPGRLID ++ T L R TYLV DEADRM DMG
Sbjct: 638 QEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGF---------------- 681
Query: 182 TLMWSATWPKEVKKLAEDYLGDYIRSI 262
L++SAT+ K+V+ L D L D +R +
Sbjct: 682 ALLFSATFKKKVEHLCRDILVDPVRVV 708
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 397 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDE 510
+IFV K +E ++ N+R+ + +HGD Q ER +
Sbjct: 733 LIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSK 770
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/85 (34%), Positives = 47/85 (55%)
Frame = +2
Query: 2 ERGVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQIRPDRQ 181
E GV +V+ TPGR+ D + +G + VLDEAD ML G + QI + ++ Q
Sbjct: 207 EEGVHVVVGTPGRVFDMINRGVLNTRDIKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQ 266
Query: 182 TLMWSATWPKEVKKLAEDYLGDYIR 256
++ SAT P +V ++ ++ D +R
Sbjct: 267 VVLLSATMPTDVLEVTNKFMRDVVR 291
Score = 34.7 bits (76), Expect = 0.070
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +1
Query: 391 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEFCISSRKVVPVFL*QLMLQL 570
+ +IF T+RK + ++ + MHGD +Q+ERD R L L
Sbjct: 332 QAVIFANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDIIMKEFRSGSSRVLITTDLLA 391
Query: 571 EGLDVDGIQYVI 606
G+DV + VI
Sbjct: 392 RGIDVHQVSLVI 403
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 60.9 bits (141), Expect = 9e-10
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 89 YLVLDEADRMLDMGXEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL 241
YLVLDEADRM+DMG E +R I + RQTL++SAT PK+++ A+ L
Sbjct: 19 YLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSAL 69
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +1
Query: 391 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEFCISSRKVVPVFL*QLMLQL 570
+ +IF E K ++I + G AV +HGDK+Q+ER + L +
Sbjct: 89 QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVAS 148
Query: 571 EGLDVDGIQYVI 606
+GLD IQ+VI
Sbjct: 149 KGLDFPDIQHVI 160
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 60.9 bits (141), Expect = 9e-10
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 89 YLVLDEADRMLDMGXEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL 241
YLVLDEADRM+DMG E +R I + RQTL++SAT PK+++ A+ L
Sbjct: 19 YLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSAL 69
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +1
Query: 391 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEFCISSRKVVPVFL*QLMLQL 570
+ +IF E K ++I + G AV +HGDK+Q+ER + L +
Sbjct: 89 QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVAS 148
Query: 571 EGLDVDGIQYVI 606
+GLD IQ+VI
Sbjct: 149 KGLDFPDIQHVI 160
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/44 (56%), Positives = 35/44 (79%)
Frame = +2
Query: 125 MGXEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIR 256
MG EP+I+KI+ IRPDRQT+M SATWP V+++A+ Y+ D +R
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVR 44
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 513 LYQFKEGRASILVATDVAARG 575
L FK G A IL+ATDVA+RG
Sbjct: 85 LDDFKTGLARILIATDVASRG 105
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/83 (36%), Positives = 45/83 (54%)
Frame = +2
Query: 8 GVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQIRPDRQTL 187
G IV TPGR+ D + + + LVLDEAD ML+ G + QI + + P Q +
Sbjct: 115 GQHIVSGTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 174
Query: 188 MWSATWPKEVKKLAEDYLGDYIR 256
+ SAT P E+ ++ ++ D IR
Sbjct: 175 LLSATLPHEILEMTSKFMTDPIR 197
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/94 (29%), Positives = 41/94 (43%)
Frame = +1
Query: 391 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEFCISSRKVVPVFL*QLMLQL 570
+ +IF TKRK + ++ +R + MHGD Q+ER+ R L +
Sbjct: 238 QAVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWA 297
Query: 571 EGLDVDGIQYVIKX*LSKFVRGFTSIVLGRTGTF 672
GLDV + VI L R +GR+G F
Sbjct: 298 RGLDVQQVSLVINYDLPN-NRELYIHRIGRSGRF 330
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +2
Query: 17 IVIATPGRLIDFLEKGTTI-LQRCTYLVLDEADRMLDMGXEPQIRKIIEQIRPDRQTLMW 193
+VIATPGRL D ++ T+ L++ +LVLDEADR+LD ++ I + + RQTL++
Sbjct: 128 VVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLF 187
Query: 194 SAT 202
SAT
Sbjct: 188 SAT 190
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +3
Query: 513 LYQFKEGRASILVATDVAARGA*C*WYPICN*XLIIQIRPRVYIHRIG 656
L +FK G ILVATDVA+RG + I P+ YIHR+G
Sbjct: 290 LARFKSGTIKILVATDVASRGLDIPQVELVV-NSNIPADPKDYIHRVG 336
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +2
Query: 92 LVLDEADRMLDMGXEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL 241
LVLDEADRMLDMG IR+++ ++ RQ L++SAT+ ++K LAE L
Sbjct: 7 LVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLL 56
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +2
Query: 17 IVIATPGRLIDFLEKGTTILQR-CTYLVLDEADRMLDM-GXEPQIRKIIEQIRPDRQTLM 190
I+I TPG L+D++ K R + VLDEAD M+ + G + Q +I + + D Q L+
Sbjct: 224 IIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQVLL 283
Query: 191 WSATWPKEVKKLAE 232
+SAT+ ++V K AE
Sbjct: 284 FSATYDEDVMKFAE 297
Score = 28.3 bits (60), Expect = 6.1
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 5/132 (3%)
Frame = +1
Query: 292 NILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAV 471
NI Q +C+ E+K L G + ++F T+R A ++ + + G
Sbjct: 317 NIKQYYVVCKN--SEDKFEALCNMYGVLSI--GQCVVFCHTRRNAAWLAEKMVKEGHAVA 372
Query: 472 CMHGDKTQQERDEFCISSRKVVPVFL*QLMLQLEGLDVDGIQYVIKX*LSKFVRG---FT 642
+ G+ T ++R R L + G+DV+ + VI + ++G F
Sbjct: 373 LLSGEITIEQRIAVLERFRLGKEKLLITTNVSARGIDVEQVTLVINYDMPMDMQGKADFE 432
Query: 643 SIV--LGRTGTF 672
+ + +GRTG F
Sbjct: 433 TYLHRIGRTGRF 444
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Frame = +2
Query: 17 IVIATPGRLIDFLE--KGTTILQRCTYLVLDEADRMLDMGXEPQ 142
I+IATPGRLID LE KG + L+ YLV+DEADR+L+M E +
Sbjct: 85 IIIATPGRLIDHLENTKGFS-LRTLKYLVMDEADRILNMDFEKE 127
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/79 (27%), Positives = 42/79 (53%)
Frame = +2
Query: 5 RGVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQIRPDRQT 184
+ I + TPGR+ +E+ + +LDEAD++LD + QI I + ++Q
Sbjct: 130 KSCHIAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLLDESFQQQINWIFSALPENKQM 189
Query: 185 LMWSATWPKEVKKLAEDYL 241
+ +SAT+P+ + + Y+
Sbjct: 190 MAFSATYPEVLANHLKKYM 208
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 24/76 (31%)
Frame = +2
Query: 86 TYLVLDEADRMLDMGXEPQIRKIIE-----QIRPD-------------------RQTLMW 193
T V+ ADRM+DMG EP+++KI+E ++PD RQT+M+
Sbjct: 209 TVSVIGGADRMIDMGFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMF 268
Query: 194 SATWPKEVKKLAEDYL 241
+AT P +V++LA++YL
Sbjct: 269 TATMPPQVERLAKNYL 284
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +3
Query: 462 ASCLHAWR*NSTRKR*VLYQFKEGRASILVATDVAARG 575
A+ LH R N ++ L K G ILVATDVA RG
Sbjct: 311 ATTLHGGR-NQEQREFALSSLKGGSKDILVATDVAGRG 347
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +2
Query: 11 VEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQI 166
V+IV TPG+L DF+ L + + +LDEAD +L G I KI +I
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNKI 187
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 2 ERGVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQI 166
E V++++ATPG L+ + +K T+LV+DEAD M D + +I+ I
Sbjct: 503 ESPVDLLVATPGTLLKYRQKDRLFFSDLTHLVIDEADTMFDASFKSLTMEILHTI 557
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/55 (25%), Positives = 33/55 (60%)
Frame = +1
Query: 322 EHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGD 486
+HEK ++ LL++ S+ PG +TI+F + + ++R++ ++ + +HG+
Sbjct: 636 QHEKAERIVELLKK--DSKSPG-QTIVFCNSASSCDWLARHLEQHNLSLIRLHGN 687
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +2
Query: 14 EIVIATPGRLIDFL--EKGTTILQRCTYLVLDEADRMLDMGXE---PQIRKIIEQI-RPD 175
+I++ TP RL+ L E L +L+LDEAD++ + G + QI I + +PD
Sbjct: 258 DILVTTPNRLVHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPD 317
Query: 176 RQTLMWSATWPKEVKKLAEDYLGDYIR 256
++SAT +++ A +L +++R
Sbjct: 318 IHRGLFSATLSNGIEEWAGLHLDNHVR 344
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +1
Query: 397 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEFCISSRKVVPVFL*QLMLQLEG 576
+IFV++K +A+ + + G +H D+TQ +RD S R L L G
Sbjct: 387 LIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRG 446
Query: 577 LDVDGIQYVI 606
+D G+ VI
Sbjct: 447 IDFKGVNLVI 456
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 11 VEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQI 166
V +V+ + EK + +Q YLV+DEADRM++ G ++ I+E I
Sbjct: 316 VVVVVVVVDTSVTNQEKHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELI 367
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 513 LYQFKEGRASILVATDVAARGA*C*WYPICN*XLIIQIR----PRVYIHRIG 656
L +FK +L+ATDVAARG I N +I + P VY+HR G
Sbjct: 499 LDRFKASNTGLLLATDVAARG-----LDIANIEHVIHYQVPKDPEVYVHRSG 545
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 35.5 bits (78), Expect = 0.040
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 17 IVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLD 124
IV+ TPGR++ + T L+ + +LDE D+ML+
Sbjct: 170 IVVGTPGRILALTREKTLNLKHAKHFILDECDKMLE 205
Score = 35.1 bits (77), Expect = 0.053
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +1
Query: 289 HNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPA 468
H + Q +++EK KL LL + +Q IIFV++ ++ +S + + +PA
Sbjct: 308 HGLQQYYVKLKDNEKNRKLFDLLDLLEFNQ-----VIIFVKSVQRCTALSHLLLKQNFPA 362
Query: 469 VCMHGDKTQQER 504
+C+H Q+ER
Sbjct: 363 ICIHRGMKQEER 374
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 35.5 bits (78), Expect = 0.040
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 17 IVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLD 124
IV+ TPGR++ + T L+ + +LDE D+ML+
Sbjct: 170 IVVGTPGRILALTREKTLNLKHAKHFILDECDKMLE 205
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 56 EKGTTILQRCTYLVLDEADRMLDMGXEPQIRKIIEQI 166
E+ + +Q YLV+DEADRM++ G ++ I+E I
Sbjct: 2 EEHVSNVQLLRYLVIDEADRMVEQGHYEELSSILELI 38
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +1
Query: 271 LQLSANHN-ILQIVDICQEHEKENKLNVLLQEI-GQSQEPGAKTIIFVETKRKAENISRN 444
L L AN + L IC + ++ N L + + + G SQ G + KRK
Sbjct: 423 LSLDANFSPYLADACICFQAKRSNTLYLSVSQADGSSQLRGKNDVAVRPAKRKVIVGDNT 482
Query: 445 IRRYGWPAVCMHGDKTQQERDEFC 516
+ YG P V K Q+ + FC
Sbjct: 483 VYNYGAPHVTSTSTKAQRRNEHFC 506
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 8 GVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADR 115
G + V+ATPGR + + + L Y+V DEADR
Sbjct: 387 GGDSVVATPGRFLHVVMEMELKLSSVEYVVFDEADR 422
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 513 LYQFKEGRASILVATDVAARG 575
L +FK G ILVATD+AARG
Sbjct: 51 LQKFKNGEVDILVATDLAARG 71
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 31.1 bits (67), Expect = 0.86
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 17 IVIATPGRLIDFLEKGTTILQRCTYLVLDEADRML 121
IVI TP RL + +++ + QR +V+DE D+ L
Sbjct: 280 IVIGTPKRLWEIVQEHEHLFQRTKRIVIDEVDKTL 314
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 31.1 bits (67), Expect = 0.86
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 8 GVEIVIATPGRLIDFLEKGTTILQRCTYLVLDEADRMLD 124
G E+++ATP + L++ T L R ++V D+AD + +
Sbjct: 314 GCEVLVATPPCFLRMLKRCYTSLDRLCHVVFDDADMLAE 352
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 2 ERGVEIVIATPGRLIDFL 55
+RG EI++ TPGR+ID L
Sbjct: 5 KRGAEIIVCTPGRMIDML 22
>SB_11957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 65 TTILQRCTYLVLDEAD----RMLDMGXEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 232
TT+LQ Y L E D + + P I K++E + W TW K +KL
Sbjct: 235 TTVLQVMGYEQLKEGDLVAVNVANYDKIPCISKVVELRDQEFVIKWWKGTWLKSWEKLPS 294
Query: 233 DYLGD 247
Y G+
Sbjct: 295 QYAGN 299
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 71 ILQRCTYLVLDEADRMLDMGXEPQIRKII 157
+LQRC LVLDEA +D + Q++++I
Sbjct: 1218 LLQRCKVLVLDEATANVDYRTDRQVQQLI 1246
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 71 ILQRCTYLVLDEADRMLDMGXEPQIRKII 157
+LQRC LVLDEA +D + Q++++I
Sbjct: 983 LLQRCKVLVLDEATANVDYRTDRQVQQLI 1011
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 ERGVEIVIATPGRLIDFLEKG 64
E GV +V+ TPGR+ D + +G
Sbjct: 22 EEGVHVVVGTPGRVFDMINRG 42
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 92 LVLDEADRMLDMGXEPQIRKIIEQIRPDRQ 181
LVLDEAD ML+ G + QI + + P Q
Sbjct: 39 LVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,568,259
Number of Sequences: 59808
Number of extensions: 396605
Number of successful extensions: 1010
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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