Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0255
(718 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 155 4e-38
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 154 8e-38
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 2e-32
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 135 3e-32
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 71 7e-13
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 62 6e-10
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 5e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.93
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.8
SB_56938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_55735| Best HMM Match : Endonuclease_7 (HMM E-Value=0.5) 28 6.6
SB_43257| Best HMM Match : Endonuclease_7 (HMM E-Value=0.27) 28 6.6
SB_41355| Best HMM Match : Rho_N (HMM E-Value=0.0007) 28 6.6
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 6.6
SB_23283| Best HMM Match : Rho_N (HMM E-Value=0.0007) 28 6.6
SB_20455| Best HMM Match : Endonuclease_7 (HMM E-Value=0.55) 28 6.6
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 28 6.6
SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_11321| Best HMM Match : Endonuclease_7 (HMM E-Value=0.18) 28 6.6
SB_9405| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00011) 28 6.6
SB_2134| Best HMM Match : Endonuclease_7 (HMM E-Value=0.057) 28 6.6
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 28 6.6
SB_58495| Best HMM Match : Endonuclease_7 (HMM E-Value=0.043) 28 6.6
SB_56692| Best HMM Match : DNA_pol_B_2 (HMM E-Value=1e-04) 28 6.6
SB_55858| Best HMM Match : Endonuclease_7 (HMM E-Value=0.032) 28 6.6
SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_42952| Best HMM Match : Endonuclease_7 (HMM E-Value=0.5) 28 6.6
SB_42326| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00028) 28 6.6
SB_31526| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_31523| Best HMM Match : Rho_N (HMM E-Value=0.0007) 28 6.6
SB_30611| Best HMM Match : Endonuclease_7 (HMM E-Value=0.5) 28 6.6
SB_29571| Best HMM Match : Endonuclease_7 (HMM E-Value=0.049) 28 6.6
SB_23247| Best HMM Match : Rho_N (HMM E-Value=0.0066) 28 6.6
SB_18569| Best HMM Match : Rho_N (HMM E-Value=0.0007) 28 6.6
SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4) 28 8.7
SB_17800| Best HMM Match : Endonuclease_7 (HMM E-Value=0.032) 28 8.7
SB_49325| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.0028) 28 8.7
SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12) 28 8.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 155 bits (375), Expect = 4e-38
Identities = 83/159 (52%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
Frame = +3
Query: 237 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 416
P+ DAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 417 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSKDKPQKMQVPSLA*TFSESSMNXXXXXXX 596
VLTKMKETAEAYLG V +AV+TVPAYF+DS+ + K ++A +N
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATK-DAGTIAGLNVLRIINEPTAAAI 181
Query: 597 XXXXXXXXENEM-YLSLNLGGRYFDVSIXTIEDGIFEVE 710
E L +LGG FDVS+ TIEDGIFEV+
Sbjct: 182 AYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVK 220
Score = 137 bits (332), Expect = 7e-33
Identities = 63/67 (94%), Positives = 65/67 (97%)
Frame = +1
Query: 52 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 231
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 232 MNPNNTI 252
MNP NT+
Sbjct: 61 MNPENTV 67
Score = 80.2 bits (189), Expect = 2e-15
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = +2
Query: 509 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDQKGTGERNVLIFE 646
QRQATKDAGTI+GLNVLRIINEPTAAAIAYGLD+K ERNVLI++
Sbjct: 154 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYD 199
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 154 bits (373), Expect = 8e-38
Identities = 85/160 (53%), Positives = 106/160 (66%), Gaps = 2/160 (1%)
Frame = +3
Query: 237 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 416
P+ DAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 417 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSKDKPQKMQVPSLA*TFSESSMNXXXXXXX 596
VL KMKETAEAYLG+ V +AVITVPAYFNDS+ + K ++A +N
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATK-DAGTIAGLNVLRVINEPTAAAL 181
Query: 597 XXXXXXXXENEM-YLSLNLGGRYFDVSIXTIEDG-IFEVE 710
E L +LGG FDVSI TI+DG +FEV+
Sbjct: 182 AYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVK 221
Score = 133 bits (321), Expect = 2e-31
Identities = 60/67 (89%), Positives = 64/67 (95%)
Frame = +1
Query: 52 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 231
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 232 MNPNNTI 252
+NP NTI
Sbjct: 61 LNPENTI 67
Score = 81.4 bits (192), Expect = 7e-16
Identities = 37/46 (80%), Positives = 44/46 (95%)
Frame = +2
Query: 509 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDQKGTGERNVLIFE 646
QRQATKDAGTI+GLNVLR+INEPTAAA+AYGLD+ +GE+NVLIF+
Sbjct: 154 QRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFD 199
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 136 bits (329), Expect = 2e-32
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +1
Query: 52 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 231
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 232 MNPNNTI 252
MNP NTI
Sbjct: 61 MNPTNTI 67
Score = 116 bits (280), Expect = 1e-26
Identities = 66/122 (54%), Positives = 77/122 (63%), Gaps = 25/122 (20%)
Frame = +3
Query: 237 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV--- 407
P DAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 408 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSKDKP 521
SSMVL KMKETAEAYLG V +AV+TVPAYFNDS+ +
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQA 182
Query: 522 QK 527
K
Sbjct: 183 TK 184
Score = 81.0 bits (191), Expect = 9e-16
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +2
Query: 509 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDQKGTGERNVLIFE 646
QRQATKDAG ISGLNVLRIINEPTAAAIAYGLD+K ERNVLIF+
Sbjct: 247 QRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFD 292
Score = 77.0 bits (181), Expect = 1e-14
Identities = 45/103 (43%), Positives = 56/103 (54%)
Frame = +3
Query: 402 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSKDKPQKMQVPSLA*TFSESSMNXX 581
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDS+ + K
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 582 XXXXXXXXXXXXXENEMYLSLNLGGRYFDVSIXTIEDGIFEVE 710
+ L +LGG FDVS+ +IEDGIFEV+
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVK 313
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 135 bits (327), Expect = 3e-32
Identities = 73/157 (46%), Positives = 98/157 (62%)
Frame = +3
Query: 237 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 416
P+ DAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 417 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSKDKPQKMQVPSLA*TFSESSMNXXXXXXX 596
VLTKMKETAEAYLGK V +AV+TVPAYFND++ + K ++A +N
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK-DAGAIAGLTVMRIINEPTAAAI 879
Query: 597 XXXXXXXXENEMYLSLNLGGRYFDVSIXTIEDGIFEV 707
+ L +LGG FDVS+ TI++G+FEV
Sbjct: 880 AYGMDKKEGEKNILVFDLGGGTFDVSLLTIDNGVFEV 916
Score = 105 bits (252), Expect = 4e-23
Identities = 48/62 (77%), Positives = 55/62 (88%), Gaps = 1/62 (1%)
Frame = +1
Query: 70 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 246
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 247 TI 252
T+
Sbjct: 764 TV 765
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 73.3 bits (172), Expect = 2e-13
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 KRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 437
KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M+ T++K
Sbjct: 127 KRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKT 186
Query: 438 TAEAYLGKTVQNAVITVPAYFND 506
TAE L V + VI+VP+Y+ D
Sbjct: 187 TAEIALKTKVTDCVISVPSYYTD 209
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 70 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 225
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 509 QRQATKDAGTISGLNVLRIINEPTAAAIAYGL 604
QR+ DA +GLN LR++N+ TA ++AYG+
Sbjct: 211 QRRCMLDASATAGLNCLRLMNDTTAVSLAYGI 242
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Frame = +1
Query: 58 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 231
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 232 MNPNNTI 252
+NP NTI
Sbjct: 90 INPKNTI 96
Score = 60.9 bits (141), Expect = 1e-09
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Frame = +3
Query: 237 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 413
P+ DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 414 MVLTKMKETAEAYLGKTVQNAVITVPAYFNDSKDKPQKMQVPSLA*TFSESSMNXXXXXX 593
V+ K++ AE L TV AV++VPA F D K + ++ SLA +N
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPAEF-DIKQRNATVKAASLAGITVLRVINEPTAAA 210
Query: 594 XXXXXXXXXENEMYLSLNLGGRYFDVSIXTIEDGIF 701
+ ++LGG DVS+ I+ G+F
Sbjct: 211 LAYGLHKKEGVANVMVVDLGGGTLDVSLLNIQGGMF 246
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +2
Query: 509 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDQKGTGERNVLIFE 646
QR AT A +++G+ VLR+INEPTAAA+AYGL +K G NV++ +
Sbjct: 184 QRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVD 228
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 61.7 bits (143), Expect = 6e-10
Identities = 28/57 (49%), Positives = 43/57 (75%)
Frame = +3
Query: 357 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSKDKPQK 527
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND++ + K
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATK 58
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/67 (52%), Positives = 38/67 (56%), Gaps = 26/67 (38%)
Frame = +2
Query: 509 QRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLDQK- 613
QRQATKDAGTI+GL+VL RIINEPTAAAIAYGLD+
Sbjct: 53 QRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKAR 112
Query: 614 -GTGERN 631
G ERN
Sbjct: 113 GGKAERN 119
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +1
Query: 121 GKVEIIANDQGNRTTPSYVAFTDTERLI--GDAAKNQVAMNPNNTILMP-NVSSDVSSKM 291
G IIAND G+R TP+ VAF+DTE+LI +V N N + P V + + KM
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKM 142
Query: 292 L 294
L
Sbjct: 143 L 143
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +3
Query: 351 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSK 512
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAE 120
Score = 35.1 bits (77), Expect = 0.057
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 509 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDQK 613
+R+A A + GLNVL+I+N TA A+ YGL Q+
Sbjct: 120 ERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQ 154
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 130 EIIANDQGNRTTPSYVAFT-DTERL 201
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 645 NLGGRYFDVSIXTIEDGIFEVE 710
+LGG FD+SI I+ G+FEV+
Sbjct: 6 DLGGGTFDISILEIQKGVFEVK 27
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 445 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 266
S F+F ST + +S +KV+ SPL + + P+ G S C V + + P
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCPKI 1167
Query: 265 RLASIL 248
A++L
Sbjct: 1168 SNATVL 1173
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 238 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 140
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_56938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 653
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 534 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 582
>SB_55735| Best HMM Match : Endonuclease_7 (HMM E-Value=0.5)
Length = 349
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 85 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 133
>SB_43257| Best HMM Match : Endonuclease_7 (HMM E-Value=0.27)
Length = 398
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 85 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 133
>SB_41355| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 992
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 668 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 716
>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 2629
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 1115 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 1163
>SB_23283| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 1128
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 660 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 708
>SB_20455| Best HMM Match : Endonuclease_7 (HMM E-Value=0.55)
Length = 349
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 85 PNNEEKYISFTKQIVVDSFTNKKGNK-IDVKRDIRFID-SFKFMSASLDSL 133
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 259 ASILCCWGSSPPGSWRH 209
A ++CC G SP WRH
Sbjct: 394 ARVVCCQGDSPSPRWRH 410
>SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1998
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 743 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 791
>SB_11321| Best HMM Match : Endonuclease_7 (HMM E-Value=0.18)
Length = 704
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 358 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 406
>SB_9405| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00011)
Length = 1092
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 602 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 650
>SB_2134| Best HMM Match : Endonuclease_7 (HMM E-Value=0.057)
Length = 1124
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 201 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 249
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 259 ASILCCWGSSPPGSWRH 209
A ++CC G SP WRH
Sbjct: 169 ARVVCCQGDSPSPRWRH 185
>SB_58495| Best HMM Match : Endonuclease_7 (HMM E-Value=0.043)
Length = 351
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 229 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 277
>SB_56692| Best HMM Match : DNA_pol_B_2 (HMM E-Value=1e-04)
Length = 963
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 323 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 371
>SB_55858| Best HMM Match : Endonuclease_7 (HMM E-Value=0.032)
Length = 285
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 134 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 182
>SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 971
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 608 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 656
>SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +2
Query: 416 GAYENEG-NCRSLSWQNCAECSYHGSRVLQ*LQRQAT--KDAGTISGLNVLRIINEPTAA 586
GA +N + SL W C + YHG +V++ A AG S NV+R + P A
Sbjct: 512 GATQNANESLNSLVWARCPKHKYHGYKVIRCAVAAAVCHFHAGASSRENVMRRLCVP-AG 570
Query: 587 AIAYGLDQKGTG 622
G K TG
Sbjct: 571 HTQEGHPSKRTG 582
>SB_42952| Best HMM Match : Endonuclease_7 (HMM E-Value=0.5)
Length = 349
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 85 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 133
>SB_42326| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00028)
Length = 577
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 85 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 133
>SB_31526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1248
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 668 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 716
>SB_31523| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 1104
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 661 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 709
>SB_30611| Best HMM Match : Endonuclease_7 (HMM E-Value=0.5)
Length = 455
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 85 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 133
>SB_29571| Best HMM Match : Endonuclease_7 (HMM E-Value=0.049)
Length = 216
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 134 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 182
>SB_23247| Best HMM Match : Rho_N (HMM E-Value=0.0066)
Length = 835
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 662 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 710
>SB_18569| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 708
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 444 PNNEEKYISFTKQIVVDSFTNKEGNK-IDVKRDIRFID-SFRFMSASLDSL 492
>SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4)
Length = 735
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 623 ERNVLIFEPRRAVLRRVHPYHRGWYLR 703
+R VL F+ +HP+ RGWY R
Sbjct: 521 KRAVLAFDELIMAAAGLHPFQRGWYRR 547
>SB_17800| Best HMM Match : Endonuclease_7 (HMM E-Value=0.032)
Length = 644
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 380 PNNEEKYISFTKQVVVDSFTNKKGNK-IDVKRDIRFID-SFRFMSASLDSL 428
>SB_49325| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.0028)
Length = 537
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 85 PNNEEKYISFTKQVVVDSFTNKKGNK-IDVKRDIRFID-SFKFMSASLDSL 133
>SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12)
Length = 1970
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -1
Query: 652 PRFKDKYISFSSTLLVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLESL 500
P ++KYISF+ ++V + +N+ ++ ID +++ D + F SL+SL
Sbjct: 792 PNNEEKYISFTKQVVVDSFTNKKGNK-IDVKRDIRFID-SFRFMSASLDSL 840
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,040,759
Number of Sequences: 59808
Number of extensions: 572690
Number of successful extensions: 1723
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1716
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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