Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0252
(630 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 99 6e-22
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 71 2e-13
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 68 1e-12
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 58 1e-09
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 55 7e-09
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 54 2e-08
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 54 2e-08
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 49 6e-07
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 33 0.034
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 31 0.18
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 30 0.24
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 29 0.42
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 29 0.42
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 27 1.7
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 27 1.7
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 27 2.2
SPBC8D2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.2
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha... 25 9.0
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 25 9.0
SPAC1783.03 |fta2|sma2|Sim4 and Mal2 associated |Schizosaccharom... 25 9.0
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 25 9.0
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 98.7 bits (235), Expect = 6e-22
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+RFTRNEFN+ESKSTIGVEFATR+I +D K IKAQI TAGQERYRAITSAYYRGA
Sbjct: 28 MRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGA 83
Score = 81.8 bits (193), Expect = 7e-17
Identities = 41/70 (58%), Positives = 48/70 (68%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
VGAL+VYDI K S++NV NI+IMLVGNK+DL HLR++ TE AQAFA
Sbjct: 84 VGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAA 143
Query: 599 ANGLSFIETS 628
N LSFIETS
Sbjct: 144 ENNLSFIETS 153
Score = 34.7 bits (76), Expect = 0.011
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 178 REDEYDYLFKVVLIGD 225
+EDEYDYLFK VLIGD
Sbjct: 3 QEDEYDYLFKTVLIGD 18
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 70.5 bits (165), Expect = 2e-13
Identities = 32/56 (57%), Positives = 42/56 (75%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+RF+ + F +TIG++F R+IE+DGK IK QI TAGQER+R IT+AYYRGA
Sbjct: 27 LRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGA 82
Score = 48.8 bits (111), Expect = 6e-07
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+G LL+YD+ S++NV +N+ +L+GNK D R + E QA A+
Sbjct: 83 MGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALAD 142
Query: 599 ANGLSFIETS 628
G+ F+E S
Sbjct: 143 ELGVKFLEAS 152
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 68.1 bits (159), Expect = 1e-12
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+RF + + STIGV+F R+ E++GKT+K QI TAGQER+R ITS+YYRGA
Sbjct: 26 LRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGA 81
Score = 43.2 bits (97), Expect = 3e-05
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
G ++VYD+ S+ NV + + +LVGNKSD+ + + A+ FA++
Sbjct: 83 GIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADS 142
Query: 602 NGLSFIETS 628
+ F+ETS
Sbjct: 143 LNIPFLETS 151
Score = 29.1 bits (62), Expect = 0.55
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 187 EYDYLFKVVLIGD 225
EYDYLFK++LIGD
Sbjct: 4 EYDYLFKLLLIGD 16
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 58.0 bits (134), Expect = 1e-09
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+F +F+ E K+TIG +F T+ + VD K + Q+ TAGQER++++ A+YRGA
Sbjct: 27 QFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRGA 81
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 55.2 bits (127), Expect = 7e-09
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
++ +F+ + K+TIG +F T+ + VD K + Q+ TAGQER++++ A+YRGA
Sbjct: 27 QYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRGA 81
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 54.0 bits (124), Expect = 2e-08
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIXXTAGQERYRAITSAYYRGA 419
+RF +++F+ +STIG F T+++ +D T +K +I TAGQERY+++ YYR A
Sbjct: 32 LRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNA 88
Score = 39.9 bits (89), Expect = 3e-04
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 425 ALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDL-RHLRSIXTEXAQAFAEA 601
A++VYDI + S E + I+I L GNK DL + R++ A+A+A
Sbjct: 91 AIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAYAAE 150
Query: 602 NGLSFIETS 628
L F ETS
Sbjct: 151 ANLLFFETS 159
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 54.0 bits (124), Expect = 2e-08
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEV----DGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RF +N+++ + T+G++FA+R I V K IK QI TAGQE++R++ YYRGA
Sbjct: 28 RFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVARNYYRGA 86
Score = 42.3 bits (95), Expect = 6e-05
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
GA+LVYD+ S+E + I ++L G+KSDL++ R + TE A F
Sbjct: 88 GAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQRQVSTEEAAEFCSE 147
Query: 602 NGLS 613
+S
Sbjct: 148 KHIS 151
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 48.8 bits (111), Expect = 6e-07
Identities = 18/53 (33%), Positives = 39/53 (73%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYR 413
RF ++F+ ++TIG++F ++++ ++ +T++ Q+ TAGQER+R++ +Y R
Sbjct: 30 RFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 82
Score = 43.6 bits (98), Expect = 2e-05
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +2
Query: 425 ALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEAN 604
A++VYDI H S+ N +++I+LVGNK+DL R + E + A+
Sbjct: 87 AIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKEL 146
Query: 605 GLSFIETS 628
+ +ETS
Sbjct: 147 KIMHMETS 154
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 33.1 bits (72), Expect = 0.034
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 389 RHHVGVLPRRVGALLVYDIAKHLSYENVXXXXXXXXXXXXQN-ILIMLVGNKSDLRHLRS 565
+H +G+ G +LVY I S+E V + I++VGNKSDL R+
Sbjct: 73 KHSIGIH----GYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRA 128
Query: 566 IXTEXAQAFAEANGLSFIETS 628
+ E +A A ++ E S
Sbjct: 129 VTAEEGKALANEWKCAWTEAS 149
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 30.7 bits (66), Expect = 0.18
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +3
Query: 231 CG*KQSSVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
CG FT F E T+ + + VDGK+++ + TAGQE Y + Y
Sbjct: 19 CGKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQLALWDTAGQEEYERLRPMSY 77
Query: 411 RGA 419
A
Sbjct: 78 AKA 80
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 30.3 bits (65), Expect = 0.24
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +3
Query: 258 FTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
FT+ F + TI E I VDG +I+ + TAGQE Y + S Y
Sbjct: 33 FTKGYFPQVYEPTI-FENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSY 82
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 29.5 bits (63), Expect = 0.42
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 263 SETDRRLLLPTPESPMSTTLNK*SYSSSLVPILVYPE 153
++T R L+ P+P S +STT+NK + S+ + PE
Sbjct: 2 TDTPRILITPSPLSDISTTINKPNVHPSMSLLKALPE 38
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 29.5 bits (63), Expect = 0.42
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 249 SVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYR 413
+++ ++ F E TI + + E+DG+ + TAGQE Y A+ Y R
Sbjct: 25 TIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDVLDTAGQEEYSAMREQYMR 78
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 27.5 bits (58), Expect = 1.7
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +2
Query: 428 LLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEANG 607
++++D+ ++Y+NV +NI I+L GNK D++ R + + A F
Sbjct: 86 IIMFDVTSRITYKNVPHWWRDLVRVC-ENIPIVLCGNKVDVKE-RKVKAK-AITFHRKKN 142
Query: 608 LSFIETS 628
L + + S
Sbjct: 143 LQYYDIS 149
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
R EF + +T+GVE + I + TAGQE+ + YY
Sbjct: 28 RHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDGYY 79
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 27.5 bits (58), Expect = 1.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 324 IEVDGKTIKAQIXXTAGQERYRAITSAYY 410
+EVDG+ I+ + TAGQE Y + Y
Sbjct: 47 VEVDGRHIELALWDTAGQEDYDRLRPLSY 75
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 324 IEVDGKTIKAQIXXTAGQERYRAITSAYY 410
+EVDG+ ++ + TAGQE Y + Y
Sbjct: 47 VEVDGRHVELALWDTAGQEDYDRLRPLSY 75
>SPBC8D2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 122
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 469 VLVRQVLGDIVHEQRAHAPR 410
VLVR+V G +RAH PR
Sbjct: 65 VLVREVAGSFRQRKRAHMPR 84
>SPCC1322.14c |vtc4||vacuolar transporter chaperone
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 25.0 bits (52), Expect = 9.0
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +3
Query: 195 LFVQSCTHWRFWCG*KQSSVRFTRNE--FNLESKSTIGVEFATRSIEVDGK 341
+FV+ TH W G K RF E N + VE A + DGK
Sbjct: 274 IFVERKTHREDWTGEKSVKARFPLKEKYVNAFLRGDYTVEEAFAKMRKDGK 324
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +3
Query: 369 AGQERYRAITSAYYRGAWARCSCTISPSTCRTRTWSGGCASCAXH 503
A + R+R+ T +YR + C + + T W G C H
Sbjct: 930 AAEIRFRS-TDGHYRWHLVKSVCVNNSADTSTNLWLGTCTDIHDH 973
>SPAC1783.03 |fta2|sma2|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 351
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 246 SSVRFTRNEFNLESKSTI 299
SS+RFT++EF ES+ I
Sbjct: 155 SSIRFTQHEFEAESEKII 172
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 25.0 bits (52), Expect = 9.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = -2
Query: 263 SETDRRLLLPTPESPM-STTLNK*SYSSSLVPILVYPELF--SRRQKSVSFETS 111
S T R++ L P+ S LNK +YS+ P+ ++ +L+ +RR K + TS
Sbjct: 76 SFTQRKISLAKNLIPLFSVDLNKDTYSALKAPLKIWSKLWEDNRRLKKIIKYTS 129
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,217,487
Number of Sequences: 5004
Number of extensions: 40871
Number of successful extensions: 139
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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