Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0252
(630 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 100 8e-22
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 80 1e-15
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 73 2e-13
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 68 7e-12
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 62 4e-10
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 62 5e-10
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 61 6e-10
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 61 8e-10
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 8e-10
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 61 8e-10
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 59 3e-09
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 59 3e-09
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 55 5e-08
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 52 3e-07
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 48 5e-06
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 48 5e-06
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 48 5e-06
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 48 6e-06
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 46 3e-05
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 42 4e-04
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 42 5e-04
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 40 0.001
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 39 0.003
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 39 0.003
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 39 0.004
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 38 0.005
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 37 0.016
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 36 0.021
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 34 0.083
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 33 0.14
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 33 0.25
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 32 0.44
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 31 0.58
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 31 0.58
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 31 0.77
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 30 1.3
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 30 1.3
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 30 1.8
SB_11421| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_20898| Best HMM Match : MSSP (HMM E-Value=2.1) 29 3.1
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 28 7.2
SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05) 28 7.2
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 100 bits (240), Expect = 8e-22
Identities = 47/55 (85%), Positives = 52/55 (94%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RFTRNEF++ESKSTIGVEFATRSI+V+GK IKAQ+ TAGQERYRAITSAYYRGA
Sbjct: 31 RFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQERYRAITSAYYRGA 85
Score = 64.1 bits (149), Expect = 9e-11
Identities = 28/70 (40%), Positives = 46/70 (65%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
VGA+LVYD+ K ++++V I++MLVGNK DL+HLR++ ++ A+ + +
Sbjct: 86 VGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDLKHLRAVASDDAKKYGD 145
Query: 599 ANGLSFIETS 628
+GL+FIE S
Sbjct: 146 EHGLAFIEAS 155
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1
Query: 178 REDEYDYLFKVVLIGD 225
R D YDYL+K+VLIGD
Sbjct: 5 RYDHYDYLYKIVLIGD 20
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 80.2 bits (189), Expect = 1e-15
Identities = 39/60 (65%), Positives = 45/60 (75%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
VGALLVYDIAKHL+YENV NI+IMLVGNKSDLRHLR++ T+ A+AFAE
Sbjct: 7 VGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAKAFAE 66
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXT 368
RFTRNEFNLESKSTIGVEFATRSI+VDGKTIKAQI T
Sbjct: 30 RFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +1
Query: 169 MGTREDEYDYLFKVVLIGD 225
MGT++DEYDYLFKVVLIGD
Sbjct: 1 MGTKDDEYDYLFKVVLIGD 19
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = +3
Query: 291 STIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
STIGV+F R+IE+DGKTIK QI TAGQER+R ITS+YYRGA
Sbjct: 60 STIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGA 102
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
G ++VYD+ S+ NV +N+ +LVGNK DL + + A+ +AE+
Sbjct: 104 GIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDFTTAKEYAES 163
Query: 602 NGLSFIETS 628
G+ F+ETS
Sbjct: 164 LGVPFLETS 172
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 187 EYDYLFKVVLIGD 225
EYDYLFK++LIGD
Sbjct: 4 EYDYLFKLLLIGD 16
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+RF + F+ STIGV+F R++ VDGKTIK QI TAGQER+R +T+AYYR A
Sbjct: 26 LRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERFRTLTTAYYRSA 81
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
G +L+YD+ + ++ ++ + + +LVGNK DL R + A+ FAE
Sbjct: 83 GIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLIDCRQVGYNTAKEFAEK 142
Query: 602 NGLSFIETS 628
+SFIETS
Sbjct: 143 LDISFIETS 151
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 187 EYDYLFKVVLIGD 225
EYDYLFK++LIGD
Sbjct: 4 EYDYLFKLLLIGD 16
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/46 (56%), Positives = 36/46 (78%)
Frame = +3
Query: 282 ESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+S TIGVEF ++ + V GK++K QI TAGQER+R++T +YYRGA
Sbjct: 123 DSSHTIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGA 168
Score = 51.2 bits (117), Expect = 7e-07
Identities = 28/69 (40%), Positives = 38/69 (55%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
GALLVYDI+ ++ ++ NI+I+LVGNK DL R + A FA+
Sbjct: 170 GALLVYDISSRETFNSLTNWLTDARTLASPNIVIILVGNKKDLDADREVTFLEASRFAQE 229
Query: 602 NGLSFIETS 628
N L F+ETS
Sbjct: 230 NELMFLETS 238
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+GA+LVYDIAK S+ N+ ++ I+L+GNKSDL+HLR I + FA
Sbjct: 17 MGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIENRRGKQFAA 76
Query: 599 ANGLSFIETS 628
+G+ F+ETS
Sbjct: 77 EHGMLFMETS 86
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 375 QERYRAITSAYYRGA 419
QERYRAITSAYYRGA
Sbjct: 2 QERYRAITSAYYRGA 16
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 61.3 bits (142), Expect = 6e-10
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGAWARC 431
+RF + +F+ +STIG F T+++ +D T+K +I TAGQERY ++ YYRGA A
Sbjct: 39 LRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAI 98
Query: 432 ---SCTISPSTCRTRTW 473
T + R +TW
Sbjct: 99 VVYDITNQDTFARAKTW 115
Score = 51.2 bits (117), Expect = 7e-07
Identities = 27/68 (39%), Positives = 37/68 (54%)
Frame = +2
Query: 425 ALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEAN 604
A++VYDI ++ NI+I L GNK+DL R + E AQ++AE N
Sbjct: 97 AIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLASKRMVEYEDAQSYAEDN 156
Query: 605 GLSFIETS 628
GL F+ETS
Sbjct: 157 GLLFMETS 164
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 60.9 bits (141), Expect = 8e-10
Identities = 25/55 (45%), Positives = 40/55 (72%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RF +EFN + +TIGV+F ++DGK +K Q+ TAG+E+YRA++ +++RGA
Sbjct: 29 RFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEKYRALSRSFFRGA 83
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENV-XXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
GALLV+D++ S++++ + + +LVGNK D + + + E Q +
Sbjct: 85 GALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCDKKD-KKVSEEDIQNLSS 143
Query: 599 ANGLSFIETS 628
LS++ETS
Sbjct: 144 CYNLSWLETS 153
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 60.9 bits (141), Expect = 8e-10
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+FT+ F TIGV+F ++++VDG+ +K QI TAGQER+R+IT +YY A
Sbjct: 26 QFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQERFRSITQSYYHNA 80
Score = 35.1 bits (77), Expect = 0.047
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQ 586
G ++ YDI S+E++ +++LI +VGNKSDL R + A+
Sbjct: 82 GVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGNKSDLSTNRKVDFHHAK 136
Score = 29.1 bits (62), Expect = 3.1
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1
Query: 184 DEYDYLFKVVLIGD 225
D+Y YLFK++L+GD
Sbjct: 2 DDYSYLFKIILVGD 15
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 60.9 bits (141), Expect = 8e-10
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +3
Query: 291 STIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRG 416
+TIGV+F R+I +DG+ +K QI TAGQER+R ITS YYRG
Sbjct: 8 TTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRG 49
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
G ++VYD+ ++ NV +++ +LVGNK D + + T Q F E
Sbjct: 52 GVIVVYDVTSADTFVNVKRWLHEIDQNC-DDVIRILVGNKDDCPSKKVVETADLQKFGEQ 110
Query: 602 NGLSFIETS 628
+ ETS
Sbjct: 111 MNIRVFETS 119
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+R RN F+ ST+GV+F +++ VDGKT Q+ TAGQER+R+I +Y+R A
Sbjct: 460 LRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQERFRSIAKSYFRKA 515
Score = 35.5 bits (78), Expect = 0.036
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRS------IXTEXA 583
G LL+YD+ S+ +V + + IML GNK D+R + I E
Sbjct: 517 GVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGNKIDIRQSAAAENKTVITAESG 576
Query: 584 QAFAEANGLSFIETS 628
A+ +G FIETS
Sbjct: 577 SRLAKEHGALFIETS 591
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
R+ + F ST+G++F +++ + K +K QI TAGQERYR IT+AYYRGA
Sbjct: 40 RYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYRGA 94
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/56 (46%), Positives = 39/56 (69%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+RFT + F+ + +TIGV+F +++ V+G K I TAGQER+R +T +YYRGA
Sbjct: 26 LRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQERFRTLTPSYYRGA 81
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RFT+ F S ST+GV+ TR +++ G +K Q TAGQE++R IT +YYR A
Sbjct: 30 RFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEKFRGITQSYYRNA 84
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 428 LLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHL-RSIXTEXAQAFAEAN 604
+LV+DI ++ ++ +NIL +LVGNK+DL+ R + T A AE
Sbjct: 88 ILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDLKGASRKVNTRSAANLAEFE 147
Query: 605 GLSFIETS 628
L ++ETS
Sbjct: 148 ELLYLETS 155
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/39 (61%), Positives = 34/39 (87%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTA 371
R+T+NEF+L SK+TIGVE A R++E++GKT++AQI TA
Sbjct: 37 RYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 181 EDEYDYLFKVVLIGD 225
ED YDYLFK+VLIGD
Sbjct: 12 EDNYDYLFKIVLIGD 26
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/55 (41%), Positives = 39/55 (70%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RF +F+ +S TIGVEF + +++DG++ QI TAGQER++++ + +YRG+
Sbjct: 230 RFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLRTPFYRGS 284
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 54.8 bits (126), Expect = 5e-08
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +3
Query: 240 KQSSVR-FTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIXXTAGQERYRAITSAYYR 413
K S +R FT +F S T+GV+F R +E+ G IK QI TAGQER+R+IT +YYR
Sbjct: 26 KSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQERFRSITYSYYR 85
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQ-NILIMLVGNKSDLRHLRSIXTEXAQAFA 595
VG L++YDI S+ NV + ++ MLVG+K D R + TE + FA
Sbjct: 88 VGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKIDKESKRVVSTEEGECFA 147
Query: 596 EANGLSFIETS 628
EA+ + FIETS
Sbjct: 148 EAHNMMFIETS 158
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RF +++ +TIGV+F +++ V+G+ I Q+ TAGQER+R+IT Y+R A
Sbjct: 915 RFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQERFRSITKQYFRKA 969
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDL---RHLRSIXTEXAQAF 592
G L+ YD+ S+ N+ + + M++GNK+DL R + T +
Sbjct: 971 GILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVLGNKTDLAEDEESRVVKTIDGKNL 1030
Query: 593 AEANGLSFIETS 628
A ++ETS
Sbjct: 1031 ANQYDALYMETS 1042
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 50.8 bits (116), Expect = 9e-07
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +3
Query: 240 KQSSV-RFTRNEFNLESKSTIGVEFATRSIE-VDGKTIKAQIXXTAGQERYRAITSAYYR 413
KQS V R+ N ++ K TIGV+FA ++I+ TI+ QI AGQER+ ++T YY+
Sbjct: 31 KQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQERFSSMTRVYYK 90
Query: 414 GA 419
GA
Sbjct: 91 GA 92
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 48.4 bits (110), Expect = 5e-06
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGAWA 425
R N F ++TIG++ ++ +++ K + + TAG ER+R +T YYRGA A
Sbjct: 30 RLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVERFRTVTKNYYRGAHA 86
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+G +LVYD+ S+ N+ +++ MLVGNK D+ R I + A
Sbjct: 30 MGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRMLVGNKCDMYDKRVISQTKGEQLAS 89
Query: 599 ANGLSFIETS 628
+ G+SFIETS
Sbjct: 90 SYGISFIETS 99
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +3
Query: 336 GKTIKAQIXXTAGQERYRAITSAYYRGA 419
GK IK QI TAGQER+ IT+AYYRGA
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGA 29
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
G ++VYDI K SY N+ + + ++LVGNK DL R + + AQ +A
Sbjct: 394 GVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGNKIDLDTDREVQPDAAQEWAAL 453
Query: 602 NGLSFIETS 628
+ + F+ETS
Sbjct: 454 HDMPFVETS 462
Score = 34.7 bits (76), Expect = 0.063
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 369 AGQERYRAITSAYYRGA 419
AGQER+R ITS+YYRGA
Sbjct: 376 AGQERFRTITSSYYRGA 392
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +2
Query: 425 ALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEAN 604
AL+V+DI + S+E+V + +I++VGNK D R + + A+ AE
Sbjct: 239 ALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGNKMDESDRRKVSYDVAEKSAERL 298
Query: 605 GLSFIETS 628
GLS++ETS
Sbjct: 299 GLSYVETS 306
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGAWA 425
RF + F + + TIG++F T+++ +D ++ QI TAGQER+R + +Y R + A
Sbjct: 182 RFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQERFRCLIHSYIRDSEA 238
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSI 568
+GA+LVYDIAK S+ N+ ++ I+L+GNKSDL+HLR I
Sbjct: 17 MGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMI 66
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 375 QERYRAITSAYYRGA 419
QERYRAITSAYYRGA
Sbjct: 2 QERYRAITSAYYRGA 16
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 47.6 bits (108), Expect = 8e-06
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYR-AITSAYYR 413
R +F +++TIGV+F +S+E++G+ +K Q+ TAGQER+R ++ YYR
Sbjct: 65 RLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQERFRKSMVCHYYR 118
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 413 RRVGALL-VYDIAKHLSYENVXXXXXXXXXXXXQ-NILIMLVGNKSDLRHLRSIXTEXAQ 586
R V A++ +YDI + S+E + ++ +L+GNK DL R++ + A+
Sbjct: 118 RNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKCDLGLERTVSSNIAR 177
Query: 587 AFAEANGLSFIETS 628
FA+++ + E S
Sbjct: 178 KFADSHNMPLWEIS 191
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
G +LVYDI + +++N+ +++ M++GNK D+ R + E + A
Sbjct: 127 GIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIARE 186
Query: 602 NGLSFIETS 628
+G+ F+ETS
Sbjct: 187 HGIRFLETS 195
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRS--IXTEXAQAFA 595
GA++V+D+ S+E V I ++LVGNK+D R L S I + A +A
Sbjct: 48 GAVIVFDVTDRKSFERVPTWLDKVQEHCGHEIPVVLVGNKTD-RPLNSWKIPSNVAAKYA 106
Query: 596 EANGLSFIETS 628
NG +IETS
Sbjct: 107 TNNGFLYIETS 117
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXX--QNILIMLVGNKSDLRHLRSIXTEXAQAFA 595
G LV+DI +++ + NI ++LVGNK D+ R++ A+ FA
Sbjct: 427 GVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQLILVGNKKDMEDNRAVTYSRAKEFA 486
Query: 596 EANGLSFIETS 628
NG +IETS
Sbjct: 487 AMNGFPYIETS 497
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +3
Query: 333 DGKTIKAQIXXTAGQERYRAITSAYYRG 416
D K IK I TAGQERY +I AY+RG
Sbjct: 397 DNKKIKLTIGDTAGQERYFSILPAYFRG 424
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+G LLVYDI S++++ N+ +L+GNK D R I + ++ E
Sbjct: 3 LGILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLDAEDERVIDAQRGRSVGE 62
Query: 599 ANGLSFIETS 628
N L F E S
Sbjct: 63 DNNLEFYEAS 72
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
G ++ YDI K +++NV +N + +LVGNK DL R + E A A
Sbjct: 121 GVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIKLLVGNKKDLEREREVSLEDAVNCASH 180
Query: 602 NG-LSFIETS 628
G L +ETS
Sbjct: 181 YGMLDVLETS 190
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 345 IKAQIXXTAGQERYRAITSAYYR 413
+K QI TAGQER+R IT +YYR
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYR 117
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +2
Query: 425 ALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEAN 604
A+LVYDI ++ ++ Q+I+I + GNK D R + + AQ FA +
Sbjct: 36 AILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAGNKCDKADQRDVQVQDAQDFAGSV 95
Query: 605 GLSFIETS 628
F ETS
Sbjct: 96 DAIFAETS 103
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 330 VDGKTIKAQIXXTAGQERYRAITSAYYRGAWA 425
V+ K K I TAGQER++++ YYR A A
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAA 35
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXX-QNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
G LLVY + ++ ++ +N+ I+LVGNKSD+ R + A+ AE
Sbjct: 61 GFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVSVGEAKDLAE 120
Query: 599 ANGLSFIETS 628
A G F ETS
Sbjct: 121 AWGCPFYETS 130
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 422 GALLVYDIAKHLSYEN----VXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQA 589
G ++VY I + SYE V I I+LVGNK DLR R + + A+
Sbjct: 36 GFVVVYSITDYYSYEMARQLVKLVTQVRKTDDICQIPIVLVGNKRDLRRGRCVAKDEARE 95
Query: 590 FAEANGLSFIETS 628
FA G S ETS
Sbjct: 96 FASEYGCSHYETS 108
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 11/66 (16%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSI-----------EVDGKTIKAQIXXTAGQERYRAITS 401
++T + FN TIG++F + + G+ I Q+ TAGQER+R++T+
Sbjct: 125 QYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRIHLQLWDTAGQERFRSLTT 184
Query: 402 AYYRGA 419
A++R A
Sbjct: 185 AFFRDA 190
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 524 MLVGNKSDLRHLRSIXTEXAQAFAEANGLSFIETS 628
+L+GNK+DL R + A+A A+ GL + ETS
Sbjct: 470 VLLGNKADLEDDRVVDEAEARALADNLGLKYFETS 504
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 407 LPRRVGALLVYDIAKHLSYENVXXXXXXXXXXXXQNIL---IMLVGNKSDLRHLRSIXTE 577
L + G ++VY I + ++E Q L I+L GNK DL+H R++ +
Sbjct: 191 LSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLKHCRAVSRQ 250
Query: 578 XAQAFAEANGLSFIETS 628
A+ FA + F ETS
Sbjct: 251 EAREFAAEHECVFHETS 267
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 512 NILIMLVGNKSDLRHLRSIXTEXAQAFAEANGLSFIETS 628
+++IMLVGNK+DL R + E + A+ + FIETS
Sbjct: 31 DVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVMFIETS 69
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXX-QNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
G LLVY + ++ ++ +N+ I+LVGNKSD+ R + T A+ F E
Sbjct: 77 GFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVSTSNAKTFLE 136
Query: 599 AN 604
N
Sbjct: 137 TN 138
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 249 SVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYR 413
+V+F +F + TI +F + IEVD +I TAG E++ ++ Y +
Sbjct: 20 TVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTEQFASMRDLYIK 73
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 34.3 bits (75), Expect = 0.083
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 231 CG*KQSSVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
CG + RN+FN + ++T+ +T ++EVDG+ I+ + T+G E Y + Y
Sbjct: 243 CGKTALLNAYVRNQFNEKYEATVFNSLST-AVEVDGERIELTLWDTSGHEDYDHVRPLSY 301
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 333 DGKTIKAQIXXTAGQERYRAITSAYYR 413
+G+ I+ + TAGQE + AIT AYYR
Sbjct: 30 NGEDIRLMLWDTAGQEEFDAITKAYYR 56
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +2
Query: 422 GALLVYDIAKHLSYE-NVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
G +++Y I S+ +I I+LVGNK DL R + T+ Q A
Sbjct: 11 GFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREVTTQEGQELAH 70
Query: 599 ANGLSFIETS 628
F ETS
Sbjct: 71 RFDCPFFETS 80
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 512 NILIMLVGNKSDLRHLRSIXTEXAQAFAEANGLSFIETS 628
N ++LVGNK D+ R + + + A+ GL F ETS
Sbjct: 12 NAQVILVGNKCDMEEERVVSYDRGKQLADQLGLEFYETS 50
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQ 586
G +LVYDI S+E Q++ M++GNK D+ R + E +
Sbjct: 87 GIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSKERGE 141
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 515 ILIMLVGNKSDLRHLRSIXTEXAQAFAEANGLSFIETS 628
I ++++GNKSDL R + + Q AE G F E S
Sbjct: 140 ISVLVIGNKSDLIGERDVTRDEGQRLAETYGWLFAEAS 177
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSI 568
G LLVYDI S++N+ Q I+LVGNK D+ R +
Sbjct: 58 GILLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGNKCDVGDDREV 106
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 527 LVGNKSDLRHLRSIXTEXAQAFAEANGLSFIETS 628
L+GNK+DL R + A+A A+ GL + ETS
Sbjct: 2 LLGNKADLEDDRVVDEAEARALADNLGLKYFETS 35
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 231 CG*KQSSVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
CG + F++++F T+ + IEVDGK ++ + TAGQE Y + Y
Sbjct: 5940 CGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQEDYDRLRPLSY 5998
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 428 LLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLR 553
L+ + I S EN+ N+ I+LVGNK DLR
Sbjct: 6005 LMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 6046
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 428 LLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLR 553
L+ +DIA S+ENV + +LVGNK DLR
Sbjct: 83 LVCFDIAHRASFENVALRWLPELDHFSPGVPRVLVGNKKDLR 124
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
R EF + +T+GVE IK + TAGQE++ + YY
Sbjct: 51 RHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGLRDGYY 102
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 425 ALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLR 553
A++++D+ ++Y+NV +NI I+L GNK D++
Sbjct: 108 AIIMFDVTSRVTYKNVPNWHRDLERVC-ENIPIVLCGNKVDIK 149
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLV-GNKSDLRHLRSIXTEXAQAFA 595
G LLV+ + S+E + + M++ GNKSDL + R++ T Q A
Sbjct: 85 GFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNKSDLEYERTVSTAEGQELA 143
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 357 IXXTAGQERYRAITSAYYRGA 419
I TAGQER++++ A+YRGA
Sbjct: 1 IWDTAGQERFQSLGVAFYRGA 21
>SB_11421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 474 SGGCASCAXHADRTSSSCWSATRAISDILG 563
S GC SC D SS C S + +++G
Sbjct: 100 SSGCRSCCLDVDNMSSGCRSCCLDVDNVIG 129
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +2
Query: 428 LLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQA-----F 592
LL +DIA S+ N+ ++ +LVGNK +LR + T+ Q F
Sbjct: 85 LLCFDIANRESFANIESTWLPHVNLETSDVPKVLVGNKMELRCSQQESTDLGQTHDCVPF 144
Query: 593 AEANGLS 613
EA L+
Sbjct: 145 TEAKALA 151
>SB_20898| Best HMM Match : MSSP (HMM E-Value=2.1)
Length = 142
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 474 SGGCASCAXHADRTSSSCWSATRAISDILG 563
S GC SC D SS C S + +++G
Sbjct: 30 SSGCRSCCLDVDNMSSGCRSCCLDVDNVIG 59
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +3
Query: 288 KSTIGVEFATRSIE---VDGK---TIKAQIXXTAGQERYRAITSAYYR 413
K TIGV+F IE D K T+K Q A ER+ +T+ Y R
Sbjct: 83 KPTIGVDFYVHFIEWRETDKKKDSTVKLQFWDVAEHERFLKMTAVYCR 130
>SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05)
Length = 138
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 518 LIMLVGNKSDLRHLRSIXTEXAQAFAEANGLSFIETS 628
+++L+G K DL HLR I AE F E S
Sbjct: 34 VLILIGTKRDLGHLREIDETEGSELAEELECPFYELS 70
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,735,756
Number of Sequences: 59808
Number of extensions: 319875
Number of successful extensions: 965
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -