Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0252
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            62   1e-11
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           24   3.5  
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    24   4.6  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   6.1  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           23   6.1  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   6.1  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   8.0  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    23   8.0  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 62.1 bits (144), Expect = 1e-11
 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = +3

Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGAWARC 431
           +RF + +F+   +STIG  F T+++ +D  T+K +I  TAGQERY ++   YYRGA A  
Sbjct: 42  LRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAI 101

Query: 432 ---SCTISPSTCRTRTW 473
                  S S  R +TW
Sbjct: 102 VVYDIQNSDSFARAKTW 118



 Score = 46.0 bits (104), Expect = 1e-06
 Identities = 25/68 (36%), Positives = 36/68 (52%)
 Frame = +2

Query: 425 ALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEAN 604
           A++VYDI    S+                NI+I L GNK+DL + R +  E A+ +A+ N
Sbjct: 100 AIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAKQYADDN 159

Query: 605 GLSFIETS 628
            L F+ETS
Sbjct: 160 RLLFMETS 167


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 447 PSTCRTRTWSGGCASCAXHADRTSSSCWS 533
           P+T  T  W+   A+   HA  T+++ WS
Sbjct: 181 PTTTTTTVWTDSTATTTTHAP-TTTTTWS 208


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +2

Query: 428 LLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQ 586
           L+ + +    S+ENV            Q    +LVG + DLR   S   + A+
Sbjct: 22  LVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAK 74


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 349 FMVLPSTSILLVANSTPMVDLDSKLNSFLV 260
           F +L    +L++  + P+V  D  LN F +
Sbjct: 493 FHLLAGQPLLIIGTTGPLVLFDEALNQFCI 522


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 447 PSTCRTRTWSGGCASCAXHADRTSSSCWS 533
           P+T  T  W+   A+   HA  T+++ WS
Sbjct: 181 PTTTTTTVWTDPTATTTTHAP-TTTTTWS 208


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 447 PSTCRTRTWSGGCASCAXHADRTSSSCWS 533
           P+T  T  W+   A+   HA  T+++ WS
Sbjct: 181 PTTTTTTVWTDPTATTTTHAP-TTTTTWS 208


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = -3

Query: 562 PKMSEIALVADQHDEDVLSAWXAQLAQPPLHVLVRQVLGDIVHE 431
           P+  +     +QH+++   A  ++   PP    +  V GD+V E
Sbjct: 216 PQQQQQQQQRNQHEQEQPRASTSRAVMPPRSEALTAVRGDVVPE 259


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
 Frame = +3

Query: 330 VDGKTIKAQIXXTAGQERYRAITSAYY--RGAWARCSCTISPST 455
           VDG  +   +  TAGQE Y  +    Y     +  C    SPS+
Sbjct: 49  VDGVQVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICYSVASPSS 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,978
Number of Sequences: 2352
Number of extensions: 10744
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)