Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0252
(630 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 105 3e-23
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 103 1e-22
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 83 2e-16
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 73 2e-13
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 73 2e-13
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 73 2e-13
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 72 4e-13
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 71 7e-13
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 66 3e-11
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 66 3e-11
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 64 8e-11
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 64 8e-11
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 64 8e-11
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 62 4e-10
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 62 4e-10
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 59 2e-09
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 58 5e-09
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 58 5e-09
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 58 5e-09
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 58 5e-09
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 58 5e-09
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 58 5e-09
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 58 7e-09
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 56 2e-08
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 54 6e-08
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 51 8e-07
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 51 8e-07
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 50 1e-06
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 50 1e-06
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 50 1e-06
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 49 2e-06
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 48 6e-06
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 45 4e-05
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 45 4e-05
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 44 7e-05
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 43 2e-04
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 41 6e-04
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 41 6e-04
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 39 0.003
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 36 0.032
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 34 0.073
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 34 0.073
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 34 0.096
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 34 0.096
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 33 0.22
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 33 0.22
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 33 0.22
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 31 0.51
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 31 0.51
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 31 0.51
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 31 0.90
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 31 0.90
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 30 1.2
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 30 1.2
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 30 1.2
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 30 1.6
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92831-1|CAB07367.1| 332|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 6.3
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 28 6.3
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 28 6.3
U64848-10|AAB04888.1| 168|Caenorhabditis elegans Hypothetical p... 28 6.3
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 28 6.3
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 28 6.3
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 28 6.3
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 28 6.3
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 6.3
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 6.3
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 27 8.4
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 27 8.4
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 27 8.4
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 105 bits (251), Expect = 3e-23
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RFTRNEFNLESKSTIGVEFATRSI V+GKT+KAQI TAGQERYRAITSAYYRGA
Sbjct: 30 RFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAYYRGA 84
Score = 91.9 bits (218), Expect = 3e-19
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
VGALLVYDIAKH++YENV QNI+IMLVGNKSDLRHLR++ T+ A+ +AE
Sbjct: 85 VGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPTDEAKIYAE 144
Query: 599 ANGLSFIETS 628
N LSFIETS
Sbjct: 145 RNQLSFIETS 154
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +1
Query: 169 MGTREDEYDYLFKVVLIGD 225
MG+R+DEYDYLFKVVLIGD
Sbjct: 1 MGSRDDEYDYLFKVVLIGD 19
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 103 bits (246), Expect = 1e-22
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RFTRNEF+LESKSTIGVEFATRSI V+GKT+KAQI TAGQERYRAITSAYYRGA
Sbjct: 30 RFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAYYRGA 84
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSD 547
VGALLVYDIAKH++YENV QNI+IM VGNK D
Sbjct: 85 VGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGNKCD 127
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +1
Query: 169 MGTREDEYDYLFKVVLIGD 225
MG+R+DEYDYLFKVVLIGD
Sbjct: 1 MGSRDDEYDYLFKVVLIGD 19
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/55 (69%), Positives = 44/55 (80%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RFTRNEFNL+SK TIGVEFAT+ I V+GK +K QI TAG ER+R S+YYRGA
Sbjct: 27 RFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMERFRCGASSYYRGA 81
Score = 68.5 bits (160), Expect = 4e-12
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+GALLVYDI+KH +YE+V ++I+I LVGNKSDL H ++ T+ A+ +AE
Sbjct: 82 LGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLSH--AVPTDEAKIYAE 139
Query: 599 ANGLSFIETS 628
N +SFIETS
Sbjct: 140 RNHISFIETS 149
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RF+ + FN STIG++F R+IE+DGK IK QI TAGQER+R IT+AYYRGA
Sbjct: 27 RFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGA 81
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNK 541
+G +LVYDI S+EN+ ++ M++GNK
Sbjct: 82 MGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RF+ + FN STIG++F R+IE+DGK IK QI TAGQER+R IT+AYYRGA
Sbjct: 27 RFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGA 81
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+G +LVYDI S+EN+ ++ M++GNK D+ R + + + A
Sbjct: 82 MGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLAI 141
Query: 599 ANGLSFIETS 628
G F+ETS
Sbjct: 142 EYGTKFLETS 151
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RF+ + FN STIG++F R+IE+DGK IK QI TAGQER+R IT+AYYRGA
Sbjct: 27 RFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGA 81
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+G +LVYDI S+EN+ ++ M++GNK D+ R + + + A
Sbjct: 82 MGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLAI 141
Query: 599 ANGLSFIETS 628
G F+ETS
Sbjct: 142 EYGTKFLETS 151
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 71.7 bits (168), Expect = 4e-13
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+RF + + STIGV+F R+IE+DGKTIK QI TAGQER+R ITS+YYRGA
Sbjct: 29 LRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGA 84
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
G ++VYDI ++ NV +N+ +LVGNK DL R++ T+ AQ +A
Sbjct: 86 GIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRAVETQAAQDYAGQ 145
Query: 602 NGLSFIETS 628
G+ F+ETS
Sbjct: 146 LGIPFLETS 154
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 169 MGTREDEYDYLFKVVLIGD 225
M EYDYLFK++LIGD
Sbjct: 1 MAAMNPEYDYLFKLLLIGD 19
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+FT +F + TIGVEF TR IEV G+ IK QI TAGQER+RA+T +YYRGA
Sbjct: 30 QFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGA 84
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
GAL+VYDI + +Y ++ N I L+GNK+DL R + E A+AFAE
Sbjct: 86 GALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLEDQRDVPYEEAKAFAEE 145
Query: 602 NGLSFIETS 628
NGL+F+E S
Sbjct: 146 NGLTFLECS 154
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RF+ + FN STIG++F ++IE+ GK IK QI TAGQER+ IT++YYRGA
Sbjct: 28 RFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGA 82
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/70 (31%), Positives = 39/70 (55%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+G +LVYDI S++N+ ++++ M++GNK D+ R + E + A+
Sbjct: 83 MGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQ 142
Query: 599 ANGLSFIETS 628
+G+SF ETS
Sbjct: 143 DHGISFHETS 152
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RF+ + FN STIG++F ++IE+ GK IK QI TAGQER+ IT++YYRGA
Sbjct: 28 RFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGA 82
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNK 541
+G +LVYDI S++N+ ++++ M++GNK
Sbjct: 83 MGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNK 123
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 64.1 bits (149), Expect = 8e-11
Identities = 31/70 (44%), Positives = 45/70 (64%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+GALLVYDI S+ ++ ++IML+GNKSDL+ +R + TE +AFA+
Sbjct: 80 LGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDLKAVRDVTTEEGEAFAK 139
Query: 599 ANGLSFIETS 628
NGL+F+ETS
Sbjct: 140 KNGLTFMETS 149
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGAWARC 431
+RFT F+ +T+GVEF + +++D ++ ++ T GQE +R+I AYYR A
Sbjct: 24 LRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTCGQENFRSIIRAYYRNALG-- 81
Query: 432 SCTISPSTCR 461
+ + TCR
Sbjct: 82 ALLVYDITCR 91
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
++FT F TIGVEF R + +DGK IK QI TAGQE +R+IT +YYRGA
Sbjct: 24 LQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQESFRSITRSYYRGA 79
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
GALLVYDI + ++ ++ N++IML+GNKSDL R + E +AFA
Sbjct: 81 GALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVKREEGEAFARE 140
Query: 602 NGLSFIETS 628
+GL F+ETS
Sbjct: 141 HGLVFMETS 149
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 64.1 bits (149), Expect = 8e-11
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRG 416
+RF N F+ +TIGV+F R+++++G+ +K QI TAGQER+R ITS YYRG
Sbjct: 28 LRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRG 82
Score = 35.1 bits (77), Expect = 0.042
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
G ++VYD+ S+ NV ++ +LVGNK + R + A+ +A++
Sbjct: 85 GVVVVYDVTNGESFGNVKRWLQEIENNC-DSVQKVLVGNKCEENERRVVLESDARNYAQS 143
Query: 602 NGLSFIETS 628
+SF ETS
Sbjct: 144 MNISFFETS 152
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 61.7 bits (143), Expect = 4e-10
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+RF + F+ E +TIGV+F S+ +DG +K I TAGQER+R +T +YYRGA
Sbjct: 2 LRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGA 57
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 61.7 bits (143), Expect = 4e-10
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+RF + F+ E +TIGV+F S+ +DG +K I TAGQER+R +T +YYRGA
Sbjct: 29 LRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGA 84
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGAWA 425
+RF + +F+ +STIG F T+++ +D TIK +I TAGQERY ++ YYRGA A
Sbjct: 37 LRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMYYRGAQA 94
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +2
Query: 425 ALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEAN 604
A++VYDI S++ NI++ L GNK+D+ + R++ E A A+AE N
Sbjct: 95 AIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEANAYAEDN 154
Query: 605 GLSFIETS 628
L F+ETS
Sbjct: 155 ALLFMETS 162
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
RF F +TIGV+F +++ VDGK +K QI T GQER+R IT +YYR A
Sbjct: 29 RFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQERFRTITQSYYRSA 83
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
G +L YDI S+ ++ N++ +L+G K DL R+I E A+ A
Sbjct: 85 GIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIEAEEAEMLQRA 144
Query: 602 NGL-SFIETS 628
NG+ + +ETS
Sbjct: 145 NGMFAMLETS 154
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1
Query: 181 EDEYDYLFKVVLIGD 225
+D +DYLFK+VL+GD
Sbjct: 4 DDGFDYLFKIVLVGD 18
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 58.0 bits (134), Expect = 5e-09
Identities = 23/55 (41%), Positives = 38/55 (69%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
++ F+ + K+TIG +F TR + +D +T+ QI TAGQER++++ A+YRGA
Sbjct: 28 QYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQERFQSLGVAFYRGA 82
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
R+ + F ST+G++F +++ K +K QI TAGQERYR IT+AYYRGA
Sbjct: 41 RYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGA 95
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+G +L+YDI S+ +V +N ++LVGNK D+ R + + + A+
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 599 ANGLSFIETS 628
GL F ETS
Sbjct: 156 QLGLEFFETS 165
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
R+ + F ST+G++F +++ K +K QI TAGQERYR IT+AYYRGA
Sbjct: 41 RYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGA 95
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+G +L+YDI S+ +V +N ++LVGNK D+ R + + + A+
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 599 ANGLSFIETS 628
GL F ETS
Sbjct: 156 QLGLEFFETS 165
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
R+ + F ST+G++F +++ K +K QI TAGQERYR IT+AYYRGA
Sbjct: 41 RYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGA 95
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+G +L+YDI S+ +V +N ++LVGNK D+ R + + + A+
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 599 ANGLSFIETS 628
GL F ETS
Sbjct: 156 QLGLEFFETS 165
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
R+ + F ST+G++F +++ K +K QI TAGQERYR IT+AYYRGA
Sbjct: 55 RYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGA 109
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+G +L+YDI S+ +V +N ++LVGNK D+ R + + + A+
Sbjct: 110 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 169
Query: 599 ANGLSFIETS 628
GL F ETS
Sbjct: 170 QLGLEFFETS 179
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
R+ + F ST+G++F +++ K +K QI TAGQERYR IT+AYYRGA
Sbjct: 41 RYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGA 95
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+G +L+YDI S+ +V +N ++LVGNK D+ R + + + A+
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 599 ANGLSFIETS 628
GL F ETS
Sbjct: 156 QLGLEFFETS 165
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 57.6 bits (133), Expect = 7e-09
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGAWA 425
+FT+ F +TIGV+F ++++V IK QI TAGQER+R+IT +YYR A A
Sbjct: 26 KFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAGQERFRSITQSYYRSAHA 82
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 428 LLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEANG 607
+LVYD++ S++ + + +L +LVGNK D R + + F++ N
Sbjct: 84 VLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPERIGRDFSDVNQ 143
Query: 608 LS-FIETS 628
F+ETS
Sbjct: 144 FDYFLETS 151
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYR---GAW 422
+R R +F + ST+GV+F +++ VDG+ + Q+ TAGQER+R++ +Y+R GA
Sbjct: 479 MRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKSYFRRADGAI 538
Query: 423 ARCSCTISPSTCRTRTW 473
S R R W
Sbjct: 539 LVYDVCAEQSFLRVRDW 555
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 413 RRVGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLR--SIXTEXAQ 586
R GA+LVYD+ S+ V ++I I+LVGNK D+R S+
Sbjct: 533 RADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDMRISTPGSVAKTDGA 592
Query: 587 AFAEANGLSFIETS 628
+ A A G+ F+ETS
Sbjct: 593 SMAAAMGVLFMETS 606
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/56 (41%), Positives = 36/56 (64%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+RF F+ ST+G+EF R++E+D K +K + T GQER+R++ +YYR A
Sbjct: 24 LRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQERFRSLVGSYYRHA 79
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/70 (40%), Positives = 39/70 (55%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
+GALLVYDI S+ ++ +I+I+L+GNKSDL R + E +AFA
Sbjct: 80 IGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLEADREVRKEEGEAFAR 139
Query: 599 ANGLSFIETS 628
GL F+E S
Sbjct: 140 EFGLIFMEIS 149
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 54.4 bits (125), Expect = 6e-08
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +3
Query: 231 CG*KQSSVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
CG +RF N F ++ ST+GV+F ++I++ I+ ++ TAG ERYR I ++YY
Sbjct: 17 CGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGMERYRTIYNSYY 76
Query: 411 RGA 419
A
Sbjct: 77 HSA 79
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQ-NILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
G + VYD+ S+EN+ N ++MLVGNK+D+ R + + A+ A
Sbjct: 81 GVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVDFDRAEKLAS 140
Query: 599 ANGLSFIETS 628
G+S E S
Sbjct: 141 RLGVSLYEVS 150
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 50.8 bits (116), Expect = 8e-07
Identities = 20/43 (46%), Positives = 32/43 (74%)
Frame = +3
Query: 291 STIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
ST+G+++ + I + K +K QI TAGQER+R++T++YYR A
Sbjct: 34 STVGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSYYRDA 76
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/67 (38%), Positives = 36/67 (53%)
Frame = +2
Query: 428 LLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEANG 607
LLVYDIA S+EN + + + LVGNK DL R++ T+ + AEA
Sbjct: 80 LLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDLP--RAVPTDEGKRLAEAYQ 137
Query: 608 LSFIETS 628
+ F+ETS
Sbjct: 138 IPFMETS 144
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 50.8 bits (116), Expect = 8e-07
Identities = 20/43 (46%), Positives = 32/43 (74%)
Frame = +3
Query: 291 STIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
ST+G+++ + I + K +K QI TAGQER+R++T++YYR A
Sbjct: 34 STVGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSYYRDA 76
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/67 (38%), Positives = 36/67 (53%)
Frame = +2
Query: 428 LLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEANG 607
LLVYDIA S+EN + + + LVGNK DL R++ T+ + AEA
Sbjct: 80 LLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDLP--RAVPTDEGKRLAEAYQ 137
Query: 608 LSFIETS 628
+ F+ETS
Sbjct: 138 IPFMETS 144
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIXXTAGQERYRAITSAYYRGAWARC 431
RF N F+ K+TIGV+FA + + VD T + QI +GQ+RY +T YY+ A A
Sbjct: 30 RFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQDRYGVMTRVYYKDAHA-- 87
Query: 432 SCTISPSTCRTRTWSG 479
+ + ST R RT G
Sbjct: 88 AIIVLDST-RERTIEG 102
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +3
Query: 240 KQSSVR-FTRNEFNLESKSTIGVEFATRSIEV-DGKTIKAQIXXTAGQERYRAITSAYYR 413
K S +R FT + S T+GV+F R IE+ G +K Q+ TAGQE++R+IT +YYR
Sbjct: 30 KSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQEKFRSITKSYYR 89
Query: 414 GA 419
+
Sbjct: 90 NS 91
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXX----QNILIMLVGNKSDLRHLRSIXTEXAQ 586
VG L +YD S+E+V + LVG KSD+ R + E +
Sbjct: 92 VGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTKSDMDSQRQVNYEEGE 151
Query: 587 AFAEANGLSFIETS 628
FA+ + + FIETS
Sbjct: 152 YFAKYHKMKFIETS 165
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIXXTAGQERYRAITSAYYRGAWARC 431
RF N F+ K+TIGV+FA + + VD T + QI +GQ+RY +T YY+ A A
Sbjct: 30 RFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQDRYGVMTRVYYKDAHA-- 87
Query: 432 SCTISPSTCRTRTWSG 479
+ + ST R RT G
Sbjct: 88 AIIVLDST-RERTIEG 102
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 374 AGAVPRHHVGVLPRRV--GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSD 547
AG H +G + R G LLV+DI S+E V I++VGNK D
Sbjct: 69 AGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKID 128
Query: 548 LRHLRSIXTEXAQAFAEANGLSFIETS 628
L R + + A+A+AE+ G ++ETS
Sbjct: 129 LEEERQVTRQDAEAYAESEGALYMETS 155
Score = 47.6 bits (108), Expect = 7e-06
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 231 CG*KQSSV-RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAY 407
C K S V RF N+F+ + STI F +++ V+ I TAGQE+Y A+ Y
Sbjct: 22 CVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQEKYHALGPIY 81
Query: 408 YRGA 419
YRG+
Sbjct: 82 YRGS 85
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 249 SVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYR-AITSAYYR 413
S RF F +++TIGV+F RS ++ + ++ Q+ TAGQERYR +I + YYR
Sbjct: 117 SFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQERYRQSIVAHYYR 172
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 524 MLVGNKSDLRHLRSIXTEXAQAFAEANGLSFIETS 628
+L+GNK D+ + T+ AQ FA+ N ++ ETS
Sbjct: 213 ILIGNKCDVECTNRVSTDEAQMFADRNNMALFETS 247
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +3
Query: 258 FTRNEFNLESKSTIGVEFATRSIEV-DGKTIKAQIXXTAGQERYRAITSAYYRGA 419
F N F + +TIG++F + +++ DG++I+ Q+ TAGQER+R + AY R A
Sbjct: 26 FLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTAGQERFRQLAPAYIRSA 80
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVD-GKTIKAQIXXTAGQERYRAITSAYYRGA 419
RF N F +TIGV+F +++++ + I Q+ TAGQER+R+IT Y+R A
Sbjct: 221 RFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDTAGQERFRSITKQYFRKA 276
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDL---RHLRSIXTEXAQAF 592
G +L++D+ S+ NV ++ LVGNK DL RS A+
Sbjct: 278 GVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMDLFGSDIARSAVYRAAEKL 337
Query: 593 AEANGLSFIETS 628
A + F ETS
Sbjct: 338 AVEFKIPFFETS 349
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/53 (35%), Positives = 38/53 (71%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYR 413
RF + F+ ++TIG++F ++++ ++ +TI+ Q+ TAGQER+R++ +Y R
Sbjct: 30 RFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIR 82
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +2
Query: 425 ALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEAN 604
A++VYDI S+ +++I+LVGNK+DL R + TE + A
Sbjct: 87 AVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTEDGEKKARDL 146
Query: 605 GLSFIETS 628
+ FIETS
Sbjct: 147 NVMFIETS 154
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 48.0 bits (109), Expect = 6e-06
Identities = 18/53 (33%), Positives = 38/53 (71%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYR 413
RF + F+ ++TIG++F ++++ ++ +T++ Q+ TAGQER+R++ +Y R
Sbjct: 29 RFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 81
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +2
Query: 425 ALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEAN 604
A++VYDI S+ +++IMLVGNK+DL R + T+ + A+
Sbjct: 86 AVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTDEGERKAKEL 145
Query: 605 GLSFIETS 628
+ FIETS
Sbjct: 146 NVMFIETS 153
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAG 374
+FT +F + TIGVEF TR IEV G+ IK QI TAG
Sbjct: 30 QFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAG 374
+RF + + STIGV+F R+IE+DGKTIK QI TAG
Sbjct: 29 LRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 169 MGTREDEYDYLFKVVLIGD 225
M EYDYLFK++LIGD
Sbjct: 1 MAAMNPEYDYLFKLLLIGD 19
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQE 380
++FT F TIGVEF R + +DGK IK Q+ TAGQE
Sbjct: 24 LQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWDTAGQE 66
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
G +LV+ +A+ ++EN+ + + ++LVGNKSDL R + A FAE
Sbjct: 77 GFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDLAETRQVDESEAHNFAEK 136
Query: 602 NGLSFIETS 628
+ + ETS
Sbjct: 137 LKIPYFETS 145
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 327 EVDGKTIKAQIXXTAGQERYRAITSAYYRGA 419
+VD + + +I TAG E++ + YYR A
Sbjct: 45 KVDAENARLEILDTAGTEQFTGMRETYYRTA 75
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVD---------GKTIKAQIXXTAGQERYRAITSAY 407
R+T N F + ST+G++F + + G+ + Q+ TAGQER+R++T+A+
Sbjct: 26 RYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLLQLWDTAGQERFRSLTTAF 85
Query: 408 YRGA 419
+R A
Sbjct: 86 FRDA 89
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXX-QNILIMLVGNKSDLRHLRSIXTEXAQAFA 595
+G +L++DI S+ N+ + I++ GNK+DL + R + T A+ A
Sbjct: 90 MGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTARAKQLA 149
Query: 596 EANGLSFIETS 628
+ GL + ETS
Sbjct: 150 DQLGLPYFETS 160
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVD---------GKTIKAQIXXTAGQERYRAITSAY 407
R+T N F + ST+G++F + + G+ + Q+ TAGQER+R++T+A+
Sbjct: 26 RYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLLQLWDTAGQERFRSLTTAF 85
Query: 408 YRGA 419
+R A
Sbjct: 86 FRDA 89
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 419 VGALLVYDIAKHLSYENVXXXXXXXXXXXX-QNILIMLVGNKSDLRHLRSIXTEXAQAFA 595
+G +L++DI S+ N+ + I++ GNK+DL + R + T A+ A
Sbjct: 90 MGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTARAKQLA 149
Query: 596 EANGLSFIETS 628
+ GL + ETS
Sbjct: 150 DQLGLPYFETS 160
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQ 377
RF F +TIGV+F +++ VDGK +K QI TAG+
Sbjct: 29 RFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTAGE 69
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1
Query: 181 EDEYDYLFKVVLIGD 225
+D +DYLFK+VL+GD
Sbjct: 4 DDGFDYLFKIVLVGD 18
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXT 368
+RF N F+ +TIGV+F R+++++G+ +K QI T
Sbjct: 28 LRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDT 66
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 34.3 bits (75), Expect = 0.073
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
G +++Y + S+ + N I+LVG+K D+R R + + Q A
Sbjct: 291 GIIIMYSVVDRQSFYHAAEIFKRLEHSREHNQPIVLVGSKKDMRVKRVVTSFEGQQLART 350
Query: 602 NGLSFIETS 628
G+ F+E S
Sbjct: 351 LGIPFLEVS 359
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 34.3 bits (75), Expect = 0.073
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 512 NILIMLVGNKSDLRHLRSIXTEXAQAFAEANGLSFIETS 628
++ I+LVGNK D+R R + E + AE G ++ETS
Sbjct: 123 SVPIVLVGNKGDMRDQRVVSAELCRQRAEQWGCHYVETS 161
Score = 33.9 bits (74), Expect = 0.096
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 249 SVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYR 413
+++F +EF E + T + + + +DG+ I TAGQE Y AI YYR
Sbjct: 34 TLQFMYDEFVEEYEPTKADSYR-KKVVLDGEECSIDILDTAGQEDYSAIRDNYYR 87
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 33.9 bits (74), Expect = 0.096
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 249 SVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYR 413
+++ +N F E TI + + + +DG+T I TAGQE Y A+ Y R
Sbjct: 20 TIQLIQNHFVEEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMR 73
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 33.9 bits (74), Expect = 0.096
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 249 SVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYR 413
+++ +N F E TI + + + +DG+T I TAGQE Y A+ Y R
Sbjct: 23 TIQLIQNHFVEEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMR 76
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 32.7 bits (71), Expect = 0.22
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQN-ILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
G +LVY I ++ ++ + + ++LVGNK DL R + + Q A
Sbjct: 77 GFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNKCDLEDERVVGKDQGQNLAR 136
Query: 599 ANGLSFIETS 628
G +F+ETS
Sbjct: 137 QFGSAFLETS 146
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 249 SVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYR 413
+V+F + F + TI + + +EVDG+ +I TAG E++ A+ Y +
Sbjct: 20 TVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMK 73
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +3
Query: 291 STIGVEFATRSIEVDGK----TIKAQIXXTAGQERYRAITSAYYRGA 419
+TIG F + + D + ++ Q+ TAGQER+R + Y R A
Sbjct: 83 ATIGASFVSFDVGADYRDREDVVRLQVWDTAGQERFRCMVPMYMRNA 129
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 425 ALLVYDIAKHLSYENVXXXXXXXXXXXX-QNILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
AL+VYD+ ++E+V ++ + L+GNK+DL R + +A A
Sbjct: 132 ALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKTDLVEKREVTEAEGKAMAAK 191
Query: 602 NGLSFIETS 628
F E S
Sbjct: 192 INAKFFELS 200
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 431 LVYDIAKHLSYENVXXXXXXXXXXXXQN---ILIMLVGNKSDLRHLRSIXTEXAQAFAEA 601
LVYD+ S+EN + + ++L+GNK+DL R + E + FA +
Sbjct: 114 LVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRVVSVEAHKNFATS 173
Query: 602 NGL 610
N +
Sbjct: 174 NDM 176
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNIL-IMLVGNKSDLRHLRSIXTEXAQAFAE 598
G L+V+ + S+E V ++ I+LVGNK+DL + R + A+ A
Sbjct: 91 GFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHEAEELAH 150
Query: 599 ANGLSFIETS 628
+ ++E S
Sbjct: 151 RLSIPYLECS 160
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNIL-IMLVGNKSDLRHLRSIXTEXAQAFAE 598
G L+V+ + S+E V ++ I+LVGNK+DL + R + A+ A
Sbjct: 91 GFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHEAEELAH 150
Query: 599 ANGLSFIETS 628
+ ++E S
Sbjct: 151 RLSIPYLECS 160
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQNIL-IMLVGNKSDLRHLRSIXTEXAQAFAE 598
G L+V+ + S+E V ++ I+LVGNK+DL + R + A+ A
Sbjct: 91 GFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHEAEELAH 150
Query: 599 ANGLSFIETS 628
+ ++E S
Sbjct: 151 RLSIPYLECS 160
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 255 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
R EF + +T+GVE + I+ + TAGQE++ + YY
Sbjct: 28 RHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYY 79
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 425 ALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLR 553
A++++D+ ++Y+NV +NI I+L GNK D++
Sbjct: 85 AIIMFDVTARVTYKNVPNWHRDLARVC-ENIPIVLCGNKVDVK 126
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 30.7 bits (66), Expect = 0.90
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 249 SVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRG 416
+++F + +F TI ++ + E+DG + + TAGQE + A+ Y RG
Sbjct: 34 TIQFFQKQFVDYYDPTIEDQYI-QHCEIDGNWVIMDVLDTAGQEEFSAMREQYIRG 88
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 30.7 bits (66), Expect = 0.90
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 249 SVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYRG 416
+++F + +F TI ++ + E+DG + + TAGQE + A+ Y RG
Sbjct: 34 TIQFFQKQFVDYYDPTIEDQYI-QHCEIDGNWVIMDVLDTAGQEEFSAMREQYIRG 88
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 249 SVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYYR 413
+V+F + F + TI +F + IEVDG+ +I TAG E++ ++ Y +
Sbjct: 20 TVQFVSSTFIEKYDPTIE-DFYRKEIEVDGQPSVLEILDTAGTEQFSSMRDLYIK 73
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 231 CG*KQSSVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
CG + F++++F T+ + IEVDGK ++ + TAGQE Y + Y
Sbjct: 16 CGKTCLLIVFSKDQFPDVYVPTVFENYVA-DIEVDGKQVELALWDTAGQEDYDRLRPLSY 74
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 428 LLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLR 553
L+ + I S EN+ N+ I+LVGNK DLR
Sbjct: 81 LMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLR 122
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 231 CG*KQSSVRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
CG + F++++F T+ + IEVDGK ++ + TAGQE Y + Y
Sbjct: 16 CGKTCLLIVFSKDQFPDVYVPTVFENYVA-DIEVDGKQVELALWDTAGQEDYDRLRPLSY 74
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 428 LLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLR 553
L+ + I S EN+ N+ I+LVGNK DLR
Sbjct: 81 LMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLR 122
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 521 IMLVGNKSDLRHLRSIXTEXAQAFAEANGLSFIETS 628
IMLVGNK D R + + Q A FIETS
Sbjct: 47 IMLVGNKKDEESKREVSSNSGQKVATNMECGFIETS 82
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +2
Query: 422 GALLVYDIAKHLSYENVXXXXXXXXXXXXQ-NILIMLVGNKSDLRHLRSIXTEXAQAFAE 598
G +LVY I S+E +I I++VGNK+DL R + E + A
Sbjct: 87 GFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKTDLSTQRVVRAEEGEELAR 146
Query: 599 ANGLSFIE 622
F+E
Sbjct: 147 QWDAKFVE 154
>Z92831-1|CAB07367.1| 332|Caenorhabditis elegans Hypothetical
protein F22G12.3 protein.
Length = 332
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -3
Query: 373 PAVXXI*AFMVLPSTSILLVANSTPMVDLDSKLNSFLVKRTED 245
P + + + ++LPS S+ +A + M +++K +F+V R D
Sbjct: 264 PELQSLFSILLLPSESVASIATNAGMNMIENKFKNFMVIRRND 306
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +3
Query: 261 TRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQ---ERYRAITSAYYRGAWARC 431
T EF LE GV+ ++ V+ A + Q Y + S + GA C
Sbjct: 1771 TLYEFGLEISEPNGVDSVIKASSVEQCQCPAPYTGPSCQLCASGYHRVQSGSFLGACVPC 1830
Query: 432 SCTISPSTCRTRTWSGGCASC 494
C +TC T G C C
Sbjct: 1831 ECNGHSATCDPDT--GICTDC 1849
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +3
Query: 261 TRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQ---ERYRAITSAYYRGAWARC 431
T EF LE GV+ ++ V+ A + Q Y + S + GA C
Sbjct: 1771 TLYEFGLEISEPNGVDSVIKASSVEQCQCPAPYTGPSCQLCASGYHRVQSGSFLGACVPC 1830
Query: 432 SCTISPSTCRTRTWSGGCASC 494
C +TC T G C C
Sbjct: 1831 ECNGHSATCDPDT--GICTDC 1849
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
+ +T N F E T+ ++ ++ VDG+ I + TAGQE Y + Y
Sbjct: 21 ISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWDTAGQEDYDRLRPLSY 72
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 425 ALLVYDIAKHLSYENVXXXXXXXXXXXXQNILIMLVGNKSDLR 553
A++++D+ ++Y+NV +NI I+L GNK D++
Sbjct: 19 AIIMFDVTARVTYKNVPNWHHDLARVC-ENIPIVLCGNKVDVK 60
>U64848-10|AAB04888.1| 168|Caenorhabditis elegans Hypothetical
protein C50E3.2 protein.
Length = 168
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 194 IICSKLYSLEILVWVKAVFC 253
+IC KL + ++ +W A+FC
Sbjct: 71 VICGKLEACQVALWTSAMFC 90
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
+ +T N F E T+ ++ ++ VDG+ I + TAGQE Y + Y
Sbjct: 21 ISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWDTAGQEDYDRLRPLSY 72
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
+ +T N F E T+ ++ ++ VDG+ I + TAGQE Y + Y
Sbjct: 21 ISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWDTAGQEDYDRLRPLSY 72
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
+ +T N F E T+ ++ ++ VDG+ I + TAGQE Y + Y
Sbjct: 21 ISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWDTAGQEDYDRLRPLSY 72
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERYRAITSAYY 410
+ +T N F E T+ ++ ++ VDG+ I + TAGQE Y + Y
Sbjct: 21 ISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWDTAGQEDYDRLRPLSY 72
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +3
Query: 261 TRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQ---ERYRAITSAYYRGAWARC 431
T EF LE GV+ ++ V+ A + Q Y + S + GA C
Sbjct: 1771 TLYEFGLEISEPNGVDSVIKASSVEQCQCPAPYTGPSCQLCASGYHRVQSGSFLGACVPC 1830
Query: 432 SCTISPSTCRTRTWSGGCASC 494
C +TC T G C C
Sbjct: 1831 ECNGHSATCDPDT--GICTDC 1849
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +3
Query: 261 TRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQ---ERYRAITSAYYRGAWARC 431
T EF LE GV+ ++ V+ A + Q Y + S + GA C
Sbjct: 1771 TLYEFGLEISEPNGVDSVIKASSVEQCQCPAPYTGPSCQLCASGYHRVQSGSFLGACVPC 1830
Query: 432 SCTISPSTCRTRTWSGGCASC 494
C +TC T G C C
Sbjct: 1831 ECNGHSATCDPDT--GICTDC 1849
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 258 FTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERY 386
+T N F E T+ ++T ++ VDG+ I + TAGQ+ Y
Sbjct: 23 YTTNAFPGEYILTVFDTYST-NVMVDGRPINLSLWDTAGQDDY 64
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 258 FTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERY 386
+T N F E T+ ++T ++ VDG+ I + TAGQ+ Y
Sbjct: 23 YTTNAFPGEYILTVFDTYST-NVMVDGRPINLSLWDTAGQDDY 64
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 252 VRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIXXTAGQERY 386
+ +T N F E T+ ++ ++ VDG+ I + TAGQE Y
Sbjct: 21 ISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWDTAGQEDY 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,355,928
Number of Sequences: 27780
Number of extensions: 232048
Number of successful extensions: 796
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -