Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0252
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   4.3  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   4.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.5  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 73  IFVSNIIFIYGHLDVSKLTD 132
           IF+  IIFIY +  ++++TD
Sbjct: 13  IFLILIIFIYSNETIAQVTD 32


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 73  IFVSNIIFIYGHLDVSKLTD 132
           IF+  IIFIY +  ++++TD
Sbjct: 13  IFLILIIFIYSNETIAQVTD 32


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = -3

Query: 316 VANSTPMVDLDSKLNSFLVKRTEDCFYPHXXXXXXXXXXXNHIHPLLCPF 167
           V+NS  +  LDS   S    +TED F P            +  +P  C F
Sbjct: 573 VSNSKKLDRLDSLRGSTTDSQTEDNFGPLSNVRFAVFALGSSAYPNFCAF 622


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 508 TEHPHHAGRQQERSQTS*VHXD 573
           T HP   GR+Q RS     H +
Sbjct: 80  THHPIRHGRRQSRSMDLNAHRE 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,972
Number of Sequences: 438
Number of extensions: 2936
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)