Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0251
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 368 YGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYP 487
           YGR   +D+D+    +   S +  L+ G + KE G   YP
Sbjct: 292 YGRAWKMDEDSSISGVPPLSIDGALEAGPYSKEEGLLSYP 331


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 143 HWTPRRSDSYRHPVARDGLPDPTRH 69
           HW    +DS+  P   + LPD T++
Sbjct: 243 HW--HITDSHSFPFTAESLPDLTKY 265


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 170 SEREHRHTGHWTPRRSDSYRHPVARDGL 87
           S+ + +H  HW  R    + +P  R+GL
Sbjct: 12  SKGQDKHMVHWFRRGLRLHDNPSLREGL 39


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory
          receptor candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 99 PGWLARSHETRSVPGPCSTRY 37
          PGWL   H   +   P S R+
Sbjct: 5  PGWLTPPHSLGNTVTPVSLRF 25


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 344 PAGITTDTYGRI 379
           PAG+TT T G++
Sbjct: 306 PAGVTTTTKGKV 317


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = +2

Query: 104 LDVGNCQTDEESS 142
           +D G+C+T+E+S+
Sbjct: 1   MDSGDCETEEDSA 13


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 344 PAGITTDTYGRI 379
           PAG+TT T G++
Sbjct: 306 PAGVTTTTKGKV 317


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = -1

Query: 170 SEREHRHTGHWTPRRSDSYRHPVARDG 90
           ++  H H GH    +     H VA +G
Sbjct: 319 NQNHHHHAGHHIHAQHHVVNHHVAANG 345


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 93  IPGYWMSVTVRPTRSPVPGVPMFSFGREG 179
           +P +  S T++ T     G P+   GREG
Sbjct: 417 VPFFGRSFTLQFTNETQVGAPIKGPGREG 445


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,440
Number of Sequences: 336
Number of extensions: 3245
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)