Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0251
(596 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ232881-1|ABB18374.1| 868|Homo sapiens LIN41 protein. 112 1e-24
BC011052-1|AAH11052.1| 744|Homo sapiens TRIM2 protein protein. 72 1e-12
BC005016-1|AAH05016.1| 324|Homo sapiens Unknown (protein for IM... 72 1e-12
AF220018-1|AAG53472.1| 744|Homo sapiens tripartite motif protei... 72 1e-12
AB011089-1|BAA25443.1| 792|Homo sapiens KIAA0517 protein protein. 72 1e-12
BC096827-1|AAH96827.1| 744|Homo sapiens tripartite motif-contai... 69 2e-11
AF220022-1|AAG53476.1| 665|Homo sapiens tripartite motif protei... 66 9e-11
AF220021-1|AAG53475.1| 733|Homo sapiens tripartite motif protei... 66 9e-11
AF220020-1|AAG53474.1| 744|Homo sapiens tripartite motif protei... 66 9e-11
AF045239-1|AAC24809.1| 744|Homo sapiens brain expressed ring fi... 66 9e-11
AK126685-1|BAC86643.1| 566|Homo sapiens protein ( Homo sapiens ... 65 2e-10
AL445590-5|CAI40978.1| 347|Homo sapiens protein ( Human DNA seq... 45 2e-04
U18543-1|AAA86474.1| 653|Homo sapiens zinc-finger protein protein. 44 3e-04
BC003154-1|AAH03154.1| 653|Homo sapiens tripartite motif-contai... 44 3e-04
AL133284-7|CAB92723.1| 653|Homo sapiens tripartite motif-contai... 44 3e-04
S75038-1|AAB32776.1| 905|Homo sapiens pancreatic peptidylglycin... 41 0.003
S75037-1|AAB32775.1| 971|Homo sapiens pancreatic peptidylglycin... 41 0.003
M37721-1|AAA36414.1| 974|Homo sapiens peptidylglycine alpha-ami... 41 0.003
BT007419-1|AAP36087.1| 866|Homo sapiens peptidylglycine alpha-a... 41 0.003
BC018127-1|AAH18127.1| 866|Homo sapiens peptidylglycine alpha-a... 41 0.003
AF010472-1|AAD01439.1| 825|Homo sapiens alpha-amidating monooxy... 41 0.003
AB095007-1|BAC22594.1| 973|Homo sapiens peptidylglycine alpha-a... 41 0.003
BC103890-1|AAI03891.1| 395|Homo sapiens NHL repeat containing 1... 38 0.036
BC103889-1|AAI03890.1| 395|Homo sapiens NHL repeat containing 1... 38 0.036
BC103888-1|AAI03889.1| 395|Homo sapiens NHL repeat containing 1... 38 0.036
AY324850-1|AAQ19671.1| 395|Homo sapiens malin protein. 38 0.036
AL589723-1|CAH71232.1| 395|Homo sapiens protein ( Human DNA seq... 38 0.036
U34360-1|AAA98763.1| 1227|Homo sapiens LAF-4 protein. 30 5.4
BC036895-1|AAH36895.1| 608|Homo sapiens AFF3 protein protein. 30 7.2
AK092327-1|BAC03864.1| 781|Homo sapiens protein ( Homo sapiens ... 30 7.2
AK026467-1|BAB15489.1| 240|Homo sapiens protein ( Homo sapiens ... 29 9.5
>DQ232881-1|ABB18374.1| 868|Homo sapiens LIN41 protein.
Length = 868
Score = 112 bits (269), Expect = 1e-24
Identities = 50/84 (59%), Positives = 59/84 (70%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
NNRIQ+F G F FG+ G+ G+FD PAG+ D RI+V DKDNHR+QIFT G F
Sbjct: 627 NNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQF 686
Query: 437 ILKFGSFGKECGQFQYPWDVAVNS 508
+LKFG G + GQF YPWDVAVNS
Sbjct: 687 LLKFGEKGTKNGQFNYPWDVAVNS 710
Score = 77.0 bits (181), Expect = 5e-14
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N+R+ + + + GS+GTG+G+F P G+ D GRIIV D NHRVQ+F S+G+F
Sbjct: 768 NHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSF 827
Query: 437 ILKFGSFGKECGQFQYPWDVAV 502
+ KFG+ G GQ P +A+
Sbjct: 828 LCKFGAQGSGFGQMDRPSGIAI 849
Score = 74.5 bits (175), Expect = 3e-13
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N+RIQIF G+F + FG KGT +G+F+ P + ++ G+I+V D NHR+Q+F G F
Sbjct: 674 NHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVF 733
Query: 437 ILKFGSFGKECGQFQYPWDVAVN 505
+ K+G G F P VA N
Sbjct: 734 LNKYGFEGALWKHFDSPRGVAFN 756
Score = 61.7 bits (143), Expect = 2e-09
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = +2
Query: 299 MMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQF 478
+ FGS+G G+ P G++ D G IIV D+ N+R+Q+F G F KFG+ G GQF
Sbjct: 594 LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQF 653
Query: 479 QYPWDVAVNS 508
P VA ++
Sbjct: 654 DRPAGVACDA 663
Score = 58.8 bits (136), Expect = 1e-08
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +2
Query: 254 RNNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIF 418
RN+R+Q+F S G F FG++G+G G+ D P+GI G I+V+D N+R+ +F
Sbjct: 814 RNHRVQMFESNGSFLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF 868
Score = 56.4 bits (130), Expect = 7e-08
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 114 VTVRPTRSPVP-GVPMFSFGREGQDEGQVSRPWGLCVDKEGNIIVADR 254
V V+ RS V G+P SFG EG +G++ RPWG+ VDKEG IIVADR
Sbjct: 578 VVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADR 625
Score = 53.6 bits (123), Expect = 5e-07
Identities = 30/84 (35%), Positives = 42/84 (50%)
Frame = +2
Query: 254 RNNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGN 433
RN+RIQ+F G F +G +G FD P G+ + G ++V D +NHR+ +
Sbjct: 720 RNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQ 779
Query: 434 FILKFGSFGKECGQFQYPWDVAVN 505
GS G GQF P VAV+
Sbjct: 780 SARFLGSEGTGNGQFLRPQGVAVD 803
Score = 42.3 bits (95), Expect = 0.001
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1
Query: 511 GNIVVTDTRNHRIQLFTSDGTYITKFVF 594
G I+V+DTRNHRIQLF DG ++ K+ F
Sbjct: 712 GKILVSDTRNHRIQLFGPDGVFLNKYGF 739
Score = 41.9 bits (94), Expect = 0.002
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = +1
Query: 502 EQLGNIVVTDTRNHRIQLFTSDGTYITKF 588
+Q G I+V D+RNHR+Q+F S+G+++ KF
Sbjct: 803 DQEGRIIVADSRNHRVQMFESNGSFLCKF 831
Score = 37.5 bits (83), Expect = 0.036
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +3
Query: 168 GREGQDEGQVSRPWGLCVDKEGNIIVAD 251
G EG GQ RP G+ VD+EG IIVAD
Sbjct: 785 GSEGTGNGQFLRPQGVAVDQEGRIIVAD 812
Score = 35.9 bits (79), Expect = 0.11
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 156 MFSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
+ FG +G GQ + PW + V+ EG I+V+D
Sbjct: 687 LLKFGEKGTKNGQFNYPWDVAVNSEGKILVSD 718
Score = 34.7 bits (76), Expect = 0.25
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 517 IVVTDTRNHRIQLFTSDGTYITKF 588
IVV D NHRIQ+FT +G ++ KF
Sbjct: 667 IVVADKDNHRIQIFTFEGQFLLKF 690
Score = 31.5 bits (68), Expect = 2.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 165 FGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
FG +G GQ+ RP G+ + +G I+V D
Sbjct: 831 FGAQGSGFGQMDRPSGIAITPDGMIVVVD 859
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 165 FGREGQDEGQVSRPWGLCVDKEGNIIVADRE 257
FG G GQ RP G+ D I+VAD++
Sbjct: 643 FGTLGSRPGQFDRPAGVACDASRRIVVADKD 673
>BC011052-1|AAH11052.1| 744|Homo sapiens TRIM2 protein protein.
Length = 744
Score = 72.1 bits (169), Expect = 1e-12
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N+ +++FN GEF + FGS G G+G+F+ P G+ D+ G IIV D N R+Q+F SG+F
Sbjct: 643 NHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSF 702
Query: 437 I 439
+
Sbjct: 703 L 703
Score = 66.5 bits (155), Expect = 7e-11
Identities = 33/79 (41%), Positives = 44/79 (55%)
Frame = +2
Query: 272 IFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFG 451
IF G+ FGS+G G +F P ++ II+ D NH V++F G F+LKFG
Sbjct: 601 IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFG 660
Query: 452 SFGKECGQFQYPWDVAVNS 508
S G+ GQF P VAV+S
Sbjct: 661 SNGEGNGQFNAPTGVAVDS 679
Score = 61.3 bits (142), Expect = 3e-09
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N +QIF++ G+FK FG +G G+ P G+ G II+ D DN V IF+S G F
Sbjct: 507 NQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKF 566
Query: 437 ILKFGSFGKECG 472
K GS GK G
Sbjct: 567 KTKIGS-GKLMG 577
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +2
Query: 308 GSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYP 487
G+KG GEF G+ T G+I++ D +N VQIF++ G F +FG G+ GQ Q P
Sbjct: 477 GTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRP 536
Query: 488 WDVAVN 505
VAV+
Sbjct: 537 TGVAVH 542
Score = 53.2 bits (122), Expect = 7e-07
Identities = 33/84 (39%), Positives = 43/84 (51%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N + IF+S G+FK GS G+ P G++ D G IIV+D V IF +G
Sbjct: 554 NKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKI 608
Query: 437 ILKFGSFGKECGQFQYPWDVAVNS 508
+ +FGS G QF P AVNS
Sbjct: 609 VTRFGSRGNGDRQFAGPHFAAVNS 632
Score = 39.9 bits (89), Expect = 0.007
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +3
Query: 156 MFSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
M FG G+ GQ + P G+ VD GNIIVAD
Sbjct: 656 MLKFGSNGEGNGQFNAPTGVAVDSNGNIIVAD 687
Score = 33.9 bits (74), Expect = 0.44
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 165 FGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
FG G+ GQ+ RP G+ V G+II+AD
Sbjct: 523 FGIRGRSPGQLQRPTGVAVHPSGDIIIAD 551
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIF 418
N+RIQ+F+ G F T + P G+ + G ++V D NH +++
Sbjct: 690 NSRIQVFDGSGSFLSYIN---TSADPLYGPQGLALTSDGHVVVADSGNHCFKVY 740
Score = 29.9 bits (64), Expect = 7.2
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 517 IVVTDTRNHRIQLFTSDGTYITKF 588
I++TD NH +++F +G ++ KF
Sbjct: 636 IIITDFHNHSVKVFNQEGEFMLKF 659
Score = 29.5 bits (63), Expect = 9.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 511 GNIVVTDTRNHRIQLFTSDGTYIT 582
GNI+V D N RIQ+F G++++
Sbjct: 681 GNIIVADWGNSRIQVFDGSGSFLS 704
>BC005016-1|AAH05016.1| 324|Homo sapiens Unknown (protein for
IMAGE:3636175) protein.
Length = 324
Score = 72.1 bits (169), Expect = 1e-12
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N+ +++FN GEF + FGS G G+G+F+ P G+ D+ G IIV D N R+Q+F SG+F
Sbjct: 215 NHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSF 274
Query: 437 I 439
+
Sbjct: 275 L 275
Score = 66.5 bits (155), Expect = 7e-11
Identities = 33/79 (41%), Positives = 44/79 (55%)
Frame = +2
Query: 272 IFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFG 451
IF G+ FGS+G G +F P ++ II+ D NH V++F G F+LKFG
Sbjct: 173 IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFG 232
Query: 452 SFGKECGQFQYPWDVAVNS 508
S G+ GQF P VAV+S
Sbjct: 233 SNGEGNGQFNAPTGVAVDS 251
Score = 61.3 bits (142), Expect = 3e-09
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N +QIF++ G+FK FG +G G+ P G+ G II+ D DN V IF+S G F
Sbjct: 79 NQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKF 138
Query: 437 ILKFGSFGKECG 472
K GS GK G
Sbjct: 139 KTKIGS-GKLMG 149
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +2
Query: 308 GSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYP 487
G+KG GEF G+ T G+I++ D +N VQIF++ G F +FG G+ GQ Q P
Sbjct: 49 GTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRP 108
Query: 488 WDVAVN 505
VAV+
Sbjct: 109 TGVAVH 114
Score = 53.2 bits (122), Expect = 7e-07
Identities = 33/84 (39%), Positives = 43/84 (51%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N + IF+S G+FK GS G+ P G++ D G IIV+D V IF +G
Sbjct: 126 NKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKI 180
Query: 437 ILKFGSFGKECGQFQYPWDVAVNS 508
+ +FGS G QF P AVNS
Sbjct: 181 VTRFGSRGNGDRQFAGPHFAAVNS 204
Score = 39.9 bits (89), Expect = 0.007
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +3
Query: 156 MFSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
M FG G+ GQ + P G+ VD GNIIVAD
Sbjct: 228 MLKFGSNGEGNGQFNAPTGVAVDSNGNIIVAD 259
Score = 33.9 bits (74), Expect = 0.44
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 165 FGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
FG G+ GQ+ RP G+ V G+II+AD
Sbjct: 95 FGIRGRSPGQLQRPTGVAVHPSGDIIIAD 123
Score = 29.9 bits (64), Expect = 7.2
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 517 IVVTDTRNHRIQLFTSDGTYITKF 588
I++TD NH +++F +G ++ KF
Sbjct: 208 IIITDFHNHSVKVFNQEGEFMLKF 231
Score = 29.9 bits (64), Expect = 7.2
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNH 403
N+RIQ+F+ G F T + P G+ + G ++V D NH
Sbjct: 262 NSRIQVFDGSGSFLSYIN---TSADPLYGPQGLALTSDGHVVVADSGNH 307
Score = 29.5 bits (63), Expect = 9.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 511 GNIVVTDTRNHRIQLFTSDGTYIT 582
GNI+V D N RIQ+F G++++
Sbjct: 253 GNIIVADWGNSRIQVFDGSGSFLS 276
>AF220018-1|AAG53472.1| 744|Homo sapiens tripartite motif protein
TRIM2 protein.
Length = 744
Score = 72.1 bits (169), Expect = 1e-12
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N+ +++FN GEF + FGS G G+G+F+ P G+ D+ G IIV D N R+Q+F SG+F
Sbjct: 643 NHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSF 702
Query: 437 I 439
+
Sbjct: 703 L 703
Score = 66.5 bits (155), Expect = 7e-11
Identities = 33/79 (41%), Positives = 44/79 (55%)
Frame = +2
Query: 272 IFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFG 451
IF G+ FGS+G G +F P ++ II+ D NH V++F G F+LKFG
Sbjct: 601 IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFG 660
Query: 452 SFGKECGQFQYPWDVAVNS 508
S G+ GQF P VAV+S
Sbjct: 661 SNGEGNGQFNAPTGVAVDS 679
Score = 61.3 bits (142), Expect = 3e-09
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N +QIF++ G+FK FG +G G+ P G+ G II+ D DN V IF+S G F
Sbjct: 507 NQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKF 566
Query: 437 ILKFGSFGKECG 472
K GS GK G
Sbjct: 567 KTKIGS-GKLMG 577
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +2
Query: 308 GSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYP 487
G+KG GEF G+ T G+I++ D +N VQIF++ G F +FG G+ GQ Q P
Sbjct: 477 GTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRP 536
Query: 488 WDVAVN 505
VAV+
Sbjct: 537 TGVAVH 542
Score = 53.2 bits (122), Expect = 7e-07
Identities = 33/84 (39%), Positives = 43/84 (51%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N + IF+S G+FK GS G+ P G++ D G IIV+D V IF +G
Sbjct: 554 NKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKI 608
Query: 437 ILKFGSFGKECGQFQYPWDVAVNS 508
+ +FGS G QF P AVNS
Sbjct: 609 VTRFGSRGNGDRQFAGPHFAAVNS 632
Score = 39.9 bits (89), Expect = 0.007
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +3
Query: 156 MFSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
M FG G+ GQ + P G+ VD GNIIVAD
Sbjct: 656 MLKFGSNGEGNGQFNAPTGVAVDSNGNIIVAD 687
Score = 33.9 bits (74), Expect = 0.44
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 165 FGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
FG G+ GQ+ RP G+ V G+II+AD
Sbjct: 523 FGIRGRSPGQLQRPTGVAVHPSGDIIIAD 551
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIF 418
N+RIQ+F+ G F T + P G+ + G ++V D NH +++
Sbjct: 690 NSRIQVFDGSGSFLSYIN---TSADPLYGPQGLALTSDGHVVVADSGNHCFKVY 740
Score = 29.9 bits (64), Expect = 7.2
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 517 IVVTDTRNHRIQLFTSDGTYITKF 588
I++TD NH +++F +G ++ KF
Sbjct: 636 IIITDFHNHSVKVFNQEGEFMLKF 659
Score = 29.5 bits (63), Expect = 9.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 511 GNIVVTDTRNHRIQLFTSDGTYIT 582
GNI+V D N RIQ+F G++++
Sbjct: 681 GNIIVADWGNSRIQVFDGSGSFLS 704
>AB011089-1|BAA25443.1| 792|Homo sapiens KIAA0517 protein protein.
Length = 792
Score = 72.1 bits (169), Expect = 1e-12
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N+ +++FN GEF + FGS G G+G+F+ P G+ D+ G IIV D N R+Q+F SG+F
Sbjct: 691 NHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSF 750
Query: 437 I 439
+
Sbjct: 751 L 751
Score = 66.5 bits (155), Expect = 7e-11
Identities = 33/79 (41%), Positives = 44/79 (55%)
Frame = +2
Query: 272 IFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFG 451
IF G+ FGS+G G +F P ++ II+ D NH V++F G F+LKFG
Sbjct: 649 IFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFG 708
Query: 452 SFGKECGQFQYPWDVAVNS 508
S G+ GQF P VAV+S
Sbjct: 709 SNGEGNGQFNAPTGVAVDS 727
Score = 61.3 bits (142), Expect = 3e-09
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N +QIF++ G+FK FG +G G+ P G+ G II+ D DN V IF+S G F
Sbjct: 555 NQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKF 614
Query: 437 ILKFGSFGKECG 472
K GS GK G
Sbjct: 615 KTKIGS-GKLMG 625
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +2
Query: 308 GSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYP 487
G+KG GEF G+ T G+I++ D +N VQIF++ G F +FG G+ GQ Q P
Sbjct: 525 GTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRP 584
Query: 488 WDVAVN 505
VAV+
Sbjct: 585 TGVAVH 590
Score = 53.2 bits (122), Expect = 7e-07
Identities = 33/84 (39%), Positives = 43/84 (51%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N + IF+S G+FK GS G+ P G++ D G IIV+D V IF +G
Sbjct: 602 NKWVSIFSSDGKFKTKIGS-----GKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKI 656
Query: 437 ILKFGSFGKECGQFQYPWDVAVNS 508
+ +FGS G QF P AVNS
Sbjct: 657 VTRFGSRGNGDRQFAGPHFAAVNS 680
Score = 39.9 bits (89), Expect = 0.007
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +3
Query: 156 MFSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
M FG G+ GQ + P G+ VD GNIIVAD
Sbjct: 704 MLKFGSNGEGNGQFNAPTGVAVDSNGNIIVAD 735
Score = 33.9 bits (74), Expect = 0.44
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 165 FGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
FG G+ GQ+ RP G+ V G+II+AD
Sbjct: 571 FGIRGRSPGQLQRPTGVAVHPSGDIIIAD 599
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIF 418
N+RIQ+F+ G F T + P G+ + G ++V D NH +++
Sbjct: 738 NSRIQVFDGSGSFLSYIN---TSADPLYGPQGLALTSDGHVVVADSGNHCFKVY 788
Score = 29.9 bits (64), Expect = 7.2
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 517 IVVTDTRNHRIQLFTSDGTYITKF 588
I++TD NH +++F +G ++ KF
Sbjct: 684 IIITDFHNHSVKVFNQEGEFMLKF 707
Score = 29.5 bits (63), Expect = 9.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 511 GNIVVTDTRNHRIQLFTSDGTYIT 582
GNI+V D N RIQ+F G++++
Sbjct: 729 GNIIVADWGNSRIQVFDGSGSFLS 752
>BC096827-1|AAH96827.1| 744|Homo sapiens tripartite
motif-containing 3 protein.
Length = 744
Score = 68.5 bits (160), Expect = 2e-11
Identities = 27/61 (44%), Positives = 43/61 (70%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N+ ++++++ GEF FGS G G+G+F+ P G+ D+ G IIV D N R+Q+F SSG+F
Sbjct: 643 NHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSF 702
Query: 437 I 439
+
Sbjct: 703 L 703
Score = 64.9 bits (151), Expect = 2e-10
Identities = 34/83 (40%), Positives = 45/83 (54%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N IQ+F++ G+FK FG +G G+ P G+ DT G IIV D DN V IF+ G F
Sbjct: 507 NQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKF 566
Query: 437 ILKFGSFGKECGQFQYPWDVAVN 505
K G+ G+ P VAV+
Sbjct: 567 KTKIGA-----GRLMGPKGVAVD 584
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +2
Query: 290 EFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKEC 469
E GS+G GEF G++ + GRI+V D +N +Q+F++ G F +FG G+
Sbjct: 471 ELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSP 530
Query: 470 GQFQYPWDVAVNS 508
GQ Q P VAV++
Sbjct: 531 GQLQRPTGVAVDT 543
Score = 58.8 bits (136), Expect = 1e-08
Identities = 28/78 (35%), Positives = 41/78 (52%)
Frame = +2
Query: 275 FNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGS 454
F G+ FG +G F P + + I+V D NH V+++++ G F+ KFGS
Sbjct: 602 FQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGS 661
Query: 455 FGKECGQFQYPWDVAVNS 508
G+ GQF P VAV+S
Sbjct: 662 HGEGNGQFNAPTGVAVDS 679
Score = 44.8 bits (101), Expect = 2e-04
Identities = 28/84 (33%), Positives = 39/84 (46%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N + IF+ G+FK G+ G P G+ D G IIV+D + V F +G
Sbjct: 554 NRWVSIFSPEGKFKTKIGA-----GRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKL 608
Query: 437 ILKFGSFGKECGQFQYPWDVAVNS 508
+ +FG G F P VAVN+
Sbjct: 609 VGRFGGRGATDRHFAGPHFVAVNN 632
Score = 41.1 bits (92), Expect = 0.003
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3
Query: 156 MFSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
+F FG G+ GQ + P G+ VD GNIIVAD
Sbjct: 656 LFKFGSHGEGNGQFNAPTGVAVDSNGNIIVAD 687
Score = 39.1 bits (87), Expect = 0.012
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 159 FSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
F FG G+ GQ+ RP G+ VD G+IIVAD
Sbjct: 521 FRFGVRGRSPGQLQRPTGVAVDTNGDIIVAD 551
Score = 31.9 bits (69), Expect = 1.8
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 517 IVVTDTRNHRIQLFTSDGTYITKF 588
IVVTD NH ++++++DG ++ KF
Sbjct: 636 IVVTDFHNHSVKVYSADGEFLFKF 659
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 511 GNIVVTDTRNHRIQLFTSDGTYIT 582
GNI+V D N RIQ+F S G++++
Sbjct: 681 GNIIVADWGNSRIQVFDSSGSFLS 704
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNH 403
N+RIQ+F+S G F T + P G+ + G ++V D NH
Sbjct: 690 NSRIQVFDSSGSFLSYIN---TSAEPLYGPQGLALTSDGHVVVADAGNH 735
>AF220022-1|AAG53476.1| 665|Homo sapiens tripartite motif protein
TRIM3 isoform gamma protein.
Length = 665
Score = 66.1 bits (154), Expect = 9e-11
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N+ +++++ GEF FGS G G+G+F+ P G+ D+ G IIV D N R+Q+F SSG+F
Sbjct: 564 NHSEKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSF 623
Query: 437 I 439
+
Sbjct: 624 L 624
Score = 64.9 bits (151), Expect = 2e-10
Identities = 34/83 (40%), Positives = 45/83 (54%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N IQ+F++ G+FK FG +G G+ P G+ DT G IIV D DN V IF+ G F
Sbjct: 428 NQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKF 487
Query: 437 ILKFGSFGKECGQFQYPWDVAVN 505
K G+ G+ P VAV+
Sbjct: 488 KTKIGA-----GRLMGPKGVAVD 505
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +2
Query: 290 EFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKEC 469
E GS+G GEF G++ + GRI+V D +N +Q+F++ G F +FG G+
Sbjct: 392 ELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSP 451
Query: 470 GQFQYPWDVAVNS 508
GQ Q P VAV++
Sbjct: 452 GQLQRPTGVAVDT 464
Score = 55.6 bits (128), Expect = 1e-07
Identities = 26/78 (33%), Positives = 39/78 (50%)
Frame = +2
Query: 275 FNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGS 454
F G+ FG +G F P + ++V D NH +++++ G F+ KFGS
Sbjct: 523 FQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNEVVVTDFHNHSEKVYSADGEFLFKFGS 582
Query: 455 FGKECGQFQYPWDVAVNS 508
G+ GQF P VAV+S
Sbjct: 583 HGEGNGQFNAPTGVAVDS 600
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N + IF+ G+FK G+ G P G+ D G IIV+D + V F +G
Sbjct: 475 NRWVSIFSPEGKFKTKIGA-----GRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKL 529
Query: 437 ILKFGSFGKECGQFQYPWDVAVNS 508
+ +FG G F P VAV++
Sbjct: 530 VGRFGGRGATDRHFAGPHFVAVSN 553
Score = 41.1 bits (92), Expect = 0.003
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3
Query: 156 MFSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
+F FG G+ GQ + P G+ VD GNIIVAD
Sbjct: 577 LFKFGSHGEGNGQFNAPTGVAVDSNGNIIVAD 608
Score = 39.1 bits (87), Expect = 0.012
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 159 FSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
F FG G+ GQ+ RP G+ VD G+IIVAD
Sbjct: 442 FRFGVRGRSPGQLQRPTGVAVDTNGDIIVAD 472
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 511 GNIVVTDTRNHRIQLFTSDGTYIT 582
GNI+V D N RIQ+F S G++++
Sbjct: 602 GNIIVADWGNSRIQVFDSSGSFLS 625
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNH 403
N+RIQ+F+S G F T + P G+ + G ++V D NH
Sbjct: 611 NSRIQVFDSSGSFLSYIN---TSAEPLYGPQGLALTSDGHVVVADAGNH 656
>AF220021-1|AAG53475.1| 733|Homo sapiens tripartite motif protein
TRIM3 isoform beta protein.
Length = 733
Score = 66.1 bits (154), Expect = 9e-11
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N+ +++++ GEF FGS G G+G+F+ P G+ D+ G IIV D N R+Q+F SSG+F
Sbjct: 632 NHSEKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSF 691
Query: 437 I 439
+
Sbjct: 692 L 692
Score = 64.9 bits (151), Expect = 2e-10
Identities = 34/83 (40%), Positives = 45/83 (54%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N IQ+F++ G+FK FG +G G+ P G+ DT G IIV D DN V IF+ G F
Sbjct: 496 NQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKF 555
Query: 437 ILKFGSFGKECGQFQYPWDVAVN 505
K G+ G+ P VAV+
Sbjct: 556 KTKIGA-----GRLMGPKGVAVD 573
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +2
Query: 290 EFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKEC 469
E GS+G GEF G++ + GRI+V D +N +Q+F++ G F +FG G+
Sbjct: 460 ELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSP 519
Query: 470 GQFQYPWDVAVNS 508
GQ Q P VAV++
Sbjct: 520 GQLQRPTGVAVDT 532
Score = 55.6 bits (128), Expect = 1e-07
Identities = 26/78 (33%), Positives = 39/78 (50%)
Frame = +2
Query: 275 FNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGS 454
F G+ FG +G F P + ++V D NH +++++ G F+ KFGS
Sbjct: 591 FQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNEVVVTDFHNHSEKVYSADGEFLFKFGS 650
Query: 455 FGKECGQFQYPWDVAVNS 508
G+ GQF P VAV+S
Sbjct: 651 HGEGNGQFNAPTGVAVDS 668
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N + IF+ G+FK G+ G P G+ D G IIV+D + V F +G
Sbjct: 543 NRWVSIFSPEGKFKTKIGA-----GRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKL 597
Query: 437 ILKFGSFGKECGQFQYPWDVAVNS 508
+ +FG G F P VAV++
Sbjct: 598 VGRFGGRGATDRHFAGPHFVAVSN 621
Score = 41.1 bits (92), Expect = 0.003
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3
Query: 156 MFSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
+F FG G+ GQ + P G+ VD GNIIVAD
Sbjct: 645 LFKFGSHGEGNGQFNAPTGVAVDSNGNIIVAD 676
Score = 39.1 bits (87), Expect = 0.012
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 159 FSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
F FG G+ GQ+ RP G+ VD G+IIVAD
Sbjct: 510 FRFGVRGRSPGQLQRPTGVAVDTNGDIIVAD 540
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 511 GNIVVTDTRNHRIQLFTSDGTYIT 582
GNI+V D N RIQ+F S G++++
Sbjct: 670 GNIIVADWGNSRIQVFDSSGSFLS 693
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNH 403
N+RIQ+F+S G F T + P G+ + G ++V D NH
Sbjct: 679 NSRIQVFDSSGSFLSYIN---TSAEPLYGPQGLALTSDGHVVVADAGNH 724
>AF220020-1|AAG53474.1| 744|Homo sapiens tripartite motif protein
TRIM3 isoform alpha protein.
Length = 744
Score = 66.1 bits (154), Expect = 9e-11
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N+ +++++ GEF FGS G G+G+F+ P G+ D+ G IIV D N R+Q+F SSG+F
Sbjct: 643 NHSEKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSF 702
Query: 437 I 439
+
Sbjct: 703 L 703
Score = 64.9 bits (151), Expect = 2e-10
Identities = 34/83 (40%), Positives = 45/83 (54%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N IQ+F++ G+FK FG +G G+ P G+ DT G IIV D DN V IF+ G F
Sbjct: 507 NQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKF 566
Query: 437 ILKFGSFGKECGQFQYPWDVAVN 505
K G+ G+ P VAV+
Sbjct: 567 KTKIGA-----GRLMGPKGVAVD 584
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +2
Query: 290 EFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKEC 469
E GS+G GEF G++ + GRI+V D +N +Q+F++ G F +FG G+
Sbjct: 471 ELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSP 530
Query: 470 GQFQYPWDVAVNS 508
GQ Q P VAV++
Sbjct: 531 GQLQRPTGVAVDT 543
Score = 55.6 bits (128), Expect = 1e-07
Identities = 26/78 (33%), Positives = 39/78 (50%)
Frame = +2
Query: 275 FNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGS 454
F G+ FG +G F P + ++V D NH +++++ G F+ KFGS
Sbjct: 602 FQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNEVVVTDFHNHSEKVYSADGEFLFKFGS 661
Query: 455 FGKECGQFQYPWDVAVNS 508
G+ GQF P VAV+S
Sbjct: 662 HGEGNGQFNAPTGVAVDS 679
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N + IF+ G+FK G+ G P G+ D G IIV+D + V F +G
Sbjct: 554 NRWVSIFSPEGKFKTKIGA-----GRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKL 608
Query: 437 ILKFGSFGKECGQFQYPWDVAVNS 508
+ +FG G F P VAV++
Sbjct: 609 VGRFGGRGATDRHFAGPHFVAVSN 632
Score = 41.1 bits (92), Expect = 0.003
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3
Query: 156 MFSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
+F FG G+ GQ + P G+ VD GNIIVAD
Sbjct: 656 LFKFGSHGEGNGQFNAPTGVAVDSNGNIIVAD 687
Score = 39.1 bits (87), Expect = 0.012
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 159 FSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
F FG G+ GQ+ RP G+ VD G+IIVAD
Sbjct: 521 FRFGVRGRSPGQLQRPTGVAVDTNGDIIVAD 551
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 511 GNIVVTDTRNHRIQLFTSDGTYIT 582
GNI+V D N RIQ+F S G++++
Sbjct: 681 GNIIVADWGNSRIQVFDSSGSFLS 704
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNH 403
N+RIQ+F+S G F T + P G+ + G ++V D NH
Sbjct: 690 NSRIQVFDSSGSFLSYIN---TSAEPLYGPQGLALTSDGHVVVADAGNH 735
>AF045239-1|AAC24809.1| 744|Homo sapiens brain expressed ring
finger protein protein.
Length = 744
Score = 66.1 bits (154), Expect = 9e-11
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N+ +++++ GEF FGS G G+G+F+ P G+ D+ G IIV D N R+Q+F SSG+F
Sbjct: 643 NHSEKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSF 702
Query: 437 I 439
+
Sbjct: 703 L 703
Score = 64.9 bits (151), Expect = 2e-10
Identities = 34/83 (40%), Positives = 45/83 (54%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N IQ+F++ G+FK FG +G G+ P G+ DT G IIV D DN V IF+ G F
Sbjct: 507 NQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKF 566
Query: 437 ILKFGSFGKECGQFQYPWDVAVN 505
K G+ G+ P VAV+
Sbjct: 567 KTKIGA-----GRLMGPKGVAVD 584
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +2
Query: 290 EFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKEC 469
E GS+G GEF G++ + GRI+V D +N +Q+F++ G F +FG G+
Sbjct: 471 ELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSP 530
Query: 470 GQFQYPWDVAVNS 508
GQ Q P VAV++
Sbjct: 531 GQLQRPTGVAVDT 543
Score = 55.6 bits (128), Expect = 1e-07
Identities = 26/78 (33%), Positives = 39/78 (50%)
Frame = +2
Query: 275 FNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGS 454
F G+ FG +G F P + ++V D NH +++++ G F+ KFGS
Sbjct: 602 FQPNGKLVGRFGGRGATDRHFAGPHFVAVSNKNEVVVTDFHNHSEKVYSADGEFLFKFGS 661
Query: 455 FGKECGQFQYPWDVAVNS 508
G+ GQF P VAV+S
Sbjct: 662 HGEGNGQFNAPTGVAVDS 679
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N + IF+ G+FK G+ G P G+ D G IIV+D + V F +G
Sbjct: 554 NRWVSIFSPEGKFKTKIGA-----GRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKL 608
Query: 437 ILKFGSFGKECGQFQYPWDVAVNS 508
+ +FG G F P VAV++
Sbjct: 609 VGRFGGRGATDRHFAGPHFVAVSN 632
Score = 41.1 bits (92), Expect = 0.003
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3
Query: 156 MFSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
+F FG G+ GQ + P G+ VD GNIIVAD
Sbjct: 656 LFKFGSHGEGNGQFNAPTGVAVDSNGNIIVAD 687
Score = 39.1 bits (87), Expect = 0.012
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 159 FSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
F FG G+ GQ+ RP G+ VD G+IIVAD
Sbjct: 521 FRFGVRGRSPGQLQRPTGVAVDTNGDIIVAD 551
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 511 GNIVVTDTRNHRIQLFTSDGTYIT 582
GNI+V D N RIQ+F S G++++
Sbjct: 681 GNIIVADWGNSRIQVFDSSGSFLS 704
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNH 403
N+RIQ+F+S G F T + P G+ + G ++V D NH
Sbjct: 690 NSRIQVFDSSGSFLSYIN---TSAEPLYGPQGLALTSDGHVVVADAGNH 735
>AK126685-1|BAC86643.1| 566|Homo sapiens protein ( Homo sapiens
cDNA FLJ44731 fis, clone BRACE3025719, highly similar
to Homo sapiens ring finger protein 22 (RNF22). ).
Length = 566
Score = 64.9 bits (151), Expect = 2e-10
Identities = 34/83 (40%), Positives = 45/83 (54%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N IQ+F++ G+FK FG +G G+ P G+ DT G IIV D DN V IF+ G F
Sbjct: 345 NQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKF 404
Query: 437 ILKFGSFGKECGQFQYPWDVAVN 505
K G+ G+ P VAV+
Sbjct: 405 KTKIGA-----GRLMGPKGVAVD 422
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +2
Query: 290 EFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKEC 469
E GS+G GEF G++ + GRI+V D +N +Q+F++ G F +FG G+
Sbjct: 309 ELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSP 368
Query: 470 GQFQYPWDVAVNS 508
GQ Q P VAV++
Sbjct: 369 GQLQRPTGVAVDT 381
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNF 436
N + IF+ G+FK G+ G P G+ D G IIV+D + V F +G
Sbjct: 392 NRWVSIFSPEGKFKTKIGA-----GRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKL 446
Query: 437 ILKFGSFGKECGQFQYPWDVAVNS 508
+ +FG G F P VAV++
Sbjct: 447 VGRFGGRGATDRHFAGPHFVAVSN 470
Score = 39.1 bits (87), Expect = 0.012
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 159 FSFGREGQDEGQVSRPWGLCVDKEGNIIVAD 251
F FG G+ GQ+ RP G+ VD G+IIVAD
Sbjct: 359 FRFGVRGRSPGQLQRPTGVAVDTNGDIIVAD 389
>AL445590-5|CAI40978.1| 347|Homo sapiens protein ( Human DNA
sequence from clone RP11-50D16 on chromosome 13 Contains
the gene for a novel protein similar to stomatin
peptide, gene ).
Length = 347
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIF 418
NNR+ + + G GTG +F++P +T D+ GR+ V D+ N R+Q+F
Sbjct: 187 NNRLIKLSQDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVF 240
>U18543-1|AAA86474.1| 653|Homo sapiens zinc-finger protein protein.
Length = 653
Score = 44.4 bits (100), Expect = 3e-04
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 293 FKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSG 430
F G+KG+ G F+LP + + G ++V D+ N+R+Q+FT G
Sbjct: 357 FLKKMGAKGSTPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTRKG 402
>BC003154-1|AAH03154.1| 653|Homo sapiens tripartite
motif-containing 32 protein.
Length = 653
Score = 44.4 bits (100), Expect = 3e-04
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 293 FKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSG 430
F G+KG+ G F+LP + + G ++V D+ N+R+Q+FT G
Sbjct: 357 FLKKMGAKGSTPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTRKG 402
>AL133284-7|CAB92723.1| 653|Homo sapiens tripartite
motif-containing 32 protein.
Length = 653
Score = 44.4 bits (100), Expect = 3e-04
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 293 FKMMFGSKGTGSGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSG 430
F G+KG+ G F+LP + + G ++V D+ N+R+Q+FT G
Sbjct: 357 FLKKMGAKGSTPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTRKG 402
>S75038-1|AAB32776.1| 905|Homo sapiens pancreatic peptidylglycine
alpha-amidating monooxygenase protein.
Length = 905
Score = 41.1 bits (92), Expect = 0.003
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGS----GEFDLPAGIT-TDTYGRIIVIDKDNHRVQIF- 418
N+RI F+ G+F +G + +GS G+F +P + G++ V D++N R+Q F
Sbjct: 653 NSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFK 712
Query: 419 TSSGNFI--LKFGSFGKECGQFQY 484
T + F+ +K SFG+ Y
Sbjct: 713 TDTKEFVREIKHSSFGRNVFAISY 736
>S75037-1|AAB32775.1| 971|Homo sapiens pancreatic peptidylglycine
alpha-amidating monooxygenase protein.
Length = 971
Score = 41.1 bits (92), Expect = 0.003
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGS----GEFDLPAGIT-TDTYGRIIVIDKDNHRVQIF- 418
N+RI F+ G+F +G + +GS G+F +P + G++ V D++N R+Q F
Sbjct: 653 NSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFK 712
Query: 419 TSSGNFI--LKFGSFGKECGQFQY 484
T + F+ +K SFG+ Y
Sbjct: 713 TDTKEFVREIKHSSFGRNVFAISY 736
>M37721-1|AAA36414.1| 974|Homo sapiens peptidylglycine
alpha-amidating monooxygenase protein.
Length = 974
Score = 41.1 bits (92), Expect = 0.003
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGS----GEFDLPAGIT-TDTYGRIIVIDKDNHRVQIF- 418
N+RI F+ G+F +G + +GS G+F +P + G++ V D++N R+Q F
Sbjct: 653 NSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFK 712
Query: 419 TSSGNFI--LKFGSFGKECGQFQY 484
T + F+ +K SFG+ Y
Sbjct: 713 TDTKEFVREIKHSSFGRNVFAISY 736
>BT007419-1|AAP36087.1| 866|Homo sapiens peptidylglycine
alpha-amidating monooxygenase protein.
Length = 866
Score = 41.1 bits (92), Expect = 0.003
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGS----GEFDLPAGIT-TDTYGRIIVIDKDNHRVQIF- 418
N+RI F+ G+F +G + +GS G+F +P + G++ V D++N R+Q F
Sbjct: 546 NSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFK 605
Query: 419 TSSGNFI--LKFGSFGKECGQFQY 484
T + F+ +K SFG+ Y
Sbjct: 606 TDTKEFVREIKHSSFGRNVFAISY 629
>BC018127-1|AAH18127.1| 866|Homo sapiens peptidylglycine
alpha-amidating monooxygenase protein.
Length = 866
Score = 41.1 bits (92), Expect = 0.003
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGS----GEFDLPAGIT-TDTYGRIIVIDKDNHRVQIF- 418
N+RI F+ G+F +G + +GS G+F +P + G++ V D++N R+Q F
Sbjct: 546 NSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFK 605
Query: 419 TSSGNFI--LKFGSFGKECGQFQY 484
T + F+ +K SFG+ Y
Sbjct: 606 TDTKEFVREIKHSSFGRNVFAISY 629
>AF010472-1|AAD01439.1| 825|Homo sapiens alpha-amidating
monooxygenase protein.
Length = 825
Score = 41.1 bits (92), Expect = 0.003
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGS----GEFDLPAGIT-TDTYGRIIVIDKDNHRVQIF- 418
N+RI F+ G+F +G + +GS G+F +P + G++ V D++N R+Q F
Sbjct: 591 NSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFK 650
Query: 419 TSSGNFI--LKFGSFGKECGQFQY 484
T + F+ +K SFG+ Y
Sbjct: 651 TDTKEFVREIKHSSFGRNVFAISY 674
>AB095007-1|BAC22594.1| 973|Homo sapiens peptidylglycine
alpha-amidating monooxygenase protein.
Length = 973
Score = 41.1 bits (92), Expect = 0.003
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +2
Query: 257 NNRIQIFNSRGEFKMMFGSKGTGS----GEFDLPAGIT-TDTYGRIIVIDKDNHRVQIF- 418
N+RI F+ G+F +G + +GS G+F +P + G++ V D++N R+Q F
Sbjct: 653 NSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFK 712
Query: 419 TSSGNFI--LKFGSFGKECGQFQY 484
T + F+ +K SFG+ Y
Sbjct: 713 TDTKEFVREIKHSSFGRNVFAISY 736
>BC103890-1|AAI03891.1| 395|Homo sapiens NHL repeat containing 1
protein.
Length = 395
Score = 37.5 bits (83), Expect = 0.036
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 323 GSGEFDLPAGITT-DTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYPWDVA 499
G G P G+ GR++V+ RV+IF S G +FG G +YP DV
Sbjct: 122 GWGTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGDAAQDIRYPVDVT 181
Query: 500 VNS 508
+ +
Sbjct: 182 ITN 184
>BC103889-1|AAI03890.1| 395|Homo sapiens NHL repeat containing 1
protein.
Length = 395
Score = 37.5 bits (83), Expect = 0.036
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 323 GSGEFDLPAGITT-DTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYPWDVA 499
G G P G+ GR++V+ RV+IF S G +FG G +YP DV
Sbjct: 122 GWGTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGDAAQDIRYPVDVT 181
Query: 500 VNS 508
+ +
Sbjct: 182 ITN 184
>BC103888-1|AAI03889.1| 395|Homo sapiens NHL repeat containing 1
protein.
Length = 395
Score = 37.5 bits (83), Expect = 0.036
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 323 GSGEFDLPAGITT-DTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYPWDVA 499
G G P G+ GR++V+ RV+IF S G +FG G +YP DV
Sbjct: 122 GWGTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGDAAQDIRYPVDVT 181
Query: 500 VNS 508
+ +
Sbjct: 182 ITN 184
>AY324850-1|AAQ19671.1| 395|Homo sapiens malin protein.
Length = 395
Score = 37.5 bits (83), Expect = 0.036
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 323 GSGEFDLPAGITT-DTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYPWDVA 499
G G P G+ GR++V+ RV+IF S G +FG G +YP DV
Sbjct: 122 GWGTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGDAAQDIRYPVDVT 181
Query: 500 VNS 508
+ +
Sbjct: 182 ITN 184
>AL589723-1|CAH71232.1| 395|Homo sapiens protein ( Human DNA
sequence from clone RP11-204B7 on chromosome 6 Contains
the TPMT gene for thiopurine S-methyltransferase, the
gene for a ).
Length = 395
Score = 37.5 bits (83), Expect = 0.036
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 323 GSGEFDLPAGITT-DTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYPWDVA 499
G G P G+ GR++V+ RV+IF S G +FG G +YP DV
Sbjct: 122 GWGTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGDAAQDIRYPVDVT 181
Query: 500 VNS 508
+ +
Sbjct: 182 ITN 184
>U34360-1|AAA98763.1| 1227|Homo sapiens LAF-4 protein.
Length = 1227
Score = 30.3 bits (65), Expect = 5.4
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 94 SRATGCR*LSDRRGVQCPVCRCSLSEGKAKMKARSRGLGASASTRKAT 237
++ T R LSD VQ P CR S+ K + S G +S+S +++
Sbjct: 384 AQRTALRALSDSAVVQQPNCRTSVPSSKGSSSSSSSGTSSSSSDSESS 431
>BC036895-1|AAH36895.1| 608|Homo sapiens AFF3 protein protein.
Length = 608
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 94 SRATGCR*LSDRRGVQCPVCRCSLSEGKAKMKARSRGLGASASTRKAT 237
++ T R LSD VQ P CR S+ K + S G +S+S +++
Sbjct: 384 AQRTALRALSDSAVVQQPNCRTSVPSSKGSSSSSSSGSSSSSSDSESS 431
>AK092327-1|BAC03864.1| 781|Homo sapiens protein ( Homo sapiens
cDNA FLJ35008 fis, clone OCBBF2012191, highly similar to
LAF-4 PROTEIN. ).
Length = 781
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 94 SRATGCR*LSDRRGVQCPVCRCSLSEGKAKMKARSRGLGASASTRKAT 237
++ T R LSD VQ P CR S+ K + S G +S+S +++
Sbjct: 409 AQRTALRALSDSAVVQQPNCRTSVPSSKGSSSSSSSGSSSSSSDSESS 456
>AK026467-1|BAB15489.1| 240|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22814 fis, clone KAIA3004. ).
Length = 240
Score = 29.5 bits (63), Expect = 9.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 194 LAFILAFPSEREHRHTGHWTPRRSDSYR 111
L+ +LA P+E G+W PRR + R
Sbjct: 67 LSILLARPAESSESRVGYWMPRREEGAR 94
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,259,110
Number of Sequences: 237096
Number of extensions: 2071874
Number of successful extensions: 7426
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 6818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7413
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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