BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0250 (715 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_07_0178 - 13856391-13856458,13857231-13858211,13858848-13859175 30 1.6 11_06_0338 + 22479804-22480651,22480764-22482954 28 6.4 10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301 28 6.4 09_01_0073 - 1057560-1058043,1058199-1058385,1058754-1059062,105... 28 6.4 >10_07_0178 - 13856391-13856458,13857231-13858211,13858848-13859175 Length = 458 Score = 30.3 bits (65), Expect = 1.6 Identities = 10/22 (45%), Positives = 18/22 (81%) Frame = +3 Query: 84 KDLHKLTMATWQEKKHLITRNL 149 K++ KLT+ +W+E+K +IT N+ Sbjct: 425 KEIEKLTLTSWKEEKEIITLNV 446 >11_06_0338 + 22479804-22480651,22480764-22482954 Length = 1012 Score = 28.3 bits (60), Expect = 6.4 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 4/45 (8%) Frame = +3 Query: 96 KLTMATWQEKKHLITRNLQEVLGDDK----LTEILKQRDLKIYWG 218 ++TM+ ++ L+TRN+ E L D + + +IL + DL+I G Sbjct: 258 EITMSMLEDNPELLTRNISEHLKDKRYFVLIDDILDESDLEIIKG 302 >10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301 Length = 1116 Score = 28.3 bits (60), Expect = 6.4 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 Query: 84 KDLHKLTMATWQEKKHLITRNLQEVLGD 167 K++ KLT+ +W+E H I N EV D Sbjct: 425 KEIEKLTLTSWKEIVHTIDDNKAEVSTD 452 >09_01_0073 - 1057560-1058043,1058199-1058385,1058754-1059062, 1059427-1060269,1061572-1062552,1063189-1063516 Length = 1043 Score = 28.3 bits (60), Expect = 6.4 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 Query: 84 KDLHKLTMATWQEKKHLITRNLQEVLGD 167 K++ KLT+ +W+E H I N EV D Sbjct: 425 KEIEKLTLTSWKEIVHTIDDNKAEVSTD 452 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,036,597 Number of Sequences: 37544 Number of extensions: 319603 Number of successful extensions: 715 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 704 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 715 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1851002996 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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