Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0249
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.8  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   8.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.8  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -3

Query: 460 IVLVDDQLEPILREVVHLGRYGHEVHG 380
           IVLVD+  +P L    HL  Y   V G
Sbjct: 582 IVLVDEVQQPNLSHPFHLHGYAFNVIG 608


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +3

Query: 108 KNAHSLSYLQDEAERDHFDV 167
           +++ + SY++  +ERD+F V
Sbjct: 149 RSSSAFSYIKPSSERDYFSV 168


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/22 (27%), Positives = 16/22 (72%)
 Frame = +3

Query: 69  WLLRAAIYGDMGNKNAHSLSYL 134
           W+L + +  D+GN + +++++L
Sbjct: 270 WMLLSKLIRDVGNASGYTVTFL 291


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 511 RPWIILFGHRP 543
           RPW  ++ HRP
Sbjct: 526 RPWQTVYNHRP 536


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 693 GPCNDNVVYNGTEGTFTSNP 752
           GP ND+V   GT G  +  P
Sbjct: 83  GPVNDDVRSPGTPGPLSQAP 102


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 693 GPCNDNVVYNGTEGTFTSNP 752
           GP ND+V   GT G  +  P
Sbjct: 239 GPVNDDVRSPGTPGPLSQAP 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,239
Number of Sequences: 336
Number of extensions: 4257
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)