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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0248
         (647 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac...    80   2e-16
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha...    79   5e-16
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac...    75   7e-15
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2...    74   2e-14
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch...    70   3e-13
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo...    67   2e-12
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch...    62   5e-11
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch...    62   9e-11
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz...    61   2e-10
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac...    60   2e-10
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac...    54   2e-08
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch...    53   4e-08
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc...    44   3e-05
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos...    33   0.027
SPCC622.07 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual         28   1.3  
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce...    27   3.1  
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|...    26   4.1  
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch...    26   4.1  
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc...    26   4.1  
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|...    26   5.4  
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb...    25   7.1  

>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
           Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 155

 Score = 80.2 bits (189), Expect = 2e-16
 Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
           RL KE +D+R+  +   R   VD+ N+  W    + P +  Y  G F   + FP +YPF+
Sbjct: 11  RLTKEYSDLREHPIPDIRVNLVDD-NLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQ 69

Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQKI 267
           PP I F T+IYHPN D +G VCL I+ Q++
Sbjct: 70  PPTIEFTTRIYHPNFDSEGNVCLAILKQQV 99



 Score = 45.6 bits (103), Expect = 6e-06
 Identities = 24/88 (27%), Positives = 46/88 (52%)
 Frame = +3

Query: 168 PIQTPEN*FQNKDLPP*H**KGSGVPAHHSAENWKPATKTDQVIQALVALVNDPEPEHPL 347
           P Q P   F  +   P    +G+   A    + +KP+ K   V++ ++ L+ +P P+ PL
Sbjct: 67  PFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPL 126

Query: 348 RAELAEEFLKDRKKFTKNAEEFTKKHSE 431
            A +AE++  DR  F K A ++ ++ ++
Sbjct: 127 VASIAEQYRNDRPSFDKIARDYVEQFAK 154


>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
           Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 147

 Score = 79.0 bits (186), Expect = 5e-16
 Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
           R+ +EL D+ +    S     V + ++  WQ  I+ P + PY  G F + I+FP +YPFK
Sbjct: 5   RINRELADLGKDPPSSCSAGPVGD-DLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFK 63

Query: 178 PPKISFKTKIYHPNIDEKGQVCLPII 255
           PPK++F T+IYHPNI+  G +CL I+
Sbjct: 64  PPKVNFTTRIYHPNINSNGSICLDIL 89



 Score = 48.4 bits (110), Expect = 9e-07
 Identities = 18/56 (32%), Positives = 35/56 (62%)
 Frame = +3

Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
           + W PA    +V+ ++ +L+ DP P+ PL  E+A  +  DR ++  +A E+T+K++
Sbjct: 91  DQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKYA 146


>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
           Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 167

 Score = 75.4 bits (177), Expect = 7e-15
 Identities = 31/85 (36%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = +1

Query: 4   LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 180
           L+K+L +I+++  + F    VD+ +I  W+ +I+ P++  Y  G F   ++FP +YP  P
Sbjct: 10  LRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMP 69

Query: 181 PKISFKTKIYHPNIDEKGQVCLPII 255
           PK+ F T+I+HPN+   G+VC+ I+
Sbjct: 70  PKMKFTTEIWHPNVHPNGEVCISIL 94



 Score = 36.3 bits (80), Expect = 0.004
 Identities = 12/59 (20%), Positives = 31/59 (52%)
 Frame = +3

Query: 255 SAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 431
           + E W P    + ++ +++++++ P  E P   + A+EF ++ ++F K      ++  E
Sbjct: 107 AGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRSIE 165


>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 176

 Score = 73.7 bits (173), Expect = 2e-14
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGA-FRIEINFPAEYPFK 177
           RL+ EL  +  S           +SN+L W G I   +  Y +G  F+I ++FPA YP+ 
Sbjct: 32  RLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYS 91

Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
           PP I F + ++HPN+D  G +CL I+  K
Sbjct: 92  PPTIIFTSPMWHPNVDMSGNICLDILKDK 120


>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
           Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 217

 Score = 70.1 bits (164), Expect = 3e-13
 Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
 Frame = +1

Query: 1   RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
           R+ KEL D++Q      +   +++ +I   +G+   P+  PY  G F ++I  P +YPF+
Sbjct: 8   RIAKELADVQQDKQAGIQVWTIND-DISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFR 66

Query: 178 PPKISFKTKIYHPNI-DEKGQVCLPII 255
           PPK++F TKIYHPN+  + G +CL I+
Sbjct: 67  PPKMNFDTKIYHPNVSSQTGAICLDIL 93



 Score = 39.5 bits (88), Expect = 4e-04
 Identities = 15/56 (26%), Positives = 33/56 (58%)
 Frame = +3

Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
           + W P       + +L +L+  PEP +P  A++A+ +L++ ++F + A E+T  ++
Sbjct: 95  DQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWTSSYA 150


>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
           Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 166

 Score = 66.9 bits (156), Expect = 2e-12
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
           RL KE  ++ ++G         +E +  TW  LI  PD  P+  G +   + FP++YP  
Sbjct: 9   RLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLG 68

Query: 178 PPKISFKTKIYHPNIDEKGQVCLPII 255
           PP + F+ + +HPN+ + G VC+ I+
Sbjct: 69  PPTLKFECEFFHPNVYKDGTVCISIL 94



 Score = 31.1 bits (67), Expect = 0.14
 Identities = 9/56 (16%), Positives = 30/56 (53%)
 Frame = +3

Query: 255 SAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 422
           S+E W P    ++++ ++++++ +P  E     +  + + +DR+++ +      +K
Sbjct: 107 SSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARK 162


>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
           Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 184

 Score = 62.5 bits (145), Expect = 5e-11
 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
 Frame = +1

Query: 106 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIIVQ 261
           P   PY+ G +++ +  P+EYP+K P I F  +I+HPNIDE  G VCL +I Q
Sbjct: 39  PSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQ 91


>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
           Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 148

 Score = 61.7 bits (143), Expect = 9e-11
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = +1

Query: 106 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 246
           P    Y  G F +E+  P EYP  PP + F TKIYHPN+D+ G++CL
Sbjct: 41  PQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICL 87



 Score = 40.3 bits (90), Expect = 2e-04
 Identities = 17/56 (30%), Positives = 35/56 (62%)
 Frame = +3

Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
           ++W PA +   V+ ++ AL+  P P+ PL  ++A+ + ++  +   NA E+TKK++
Sbjct: 92  KDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYA 147


>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
           E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 151

 Score = 60.9 bits (141), Expect = 2e-10
 Identities = 21/61 (34%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = +1

Query: 76  NILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPI 252
           N++ W  +I+ P + P+  G F++ ++F  +YP KPP + F + ++HPN+   G++CL I
Sbjct: 32  NVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDI 91

Query: 253 I 255
           +
Sbjct: 92  L 92



 Score = 31.5 bits (68), Expect = 0.11
 Identities = 11/48 (22%), Positives = 25/48 (52%)
 Frame = +3

Query: 267 WKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEE 410
           W P      ++ ++ +L+NDP    P  AE A+   +++K++ +   +
Sbjct: 96  WSPTYDVAAILTSIQSLLNDPNNASPANAEAAQLHRENKKEYVRRVRK 143


>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
           Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 177

 Score = 60.5 bits (140), Expect = 2e-10
 Identities = 33/87 (37%), Positives = 44/87 (50%)
 Frame = +1

Query: 1   RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKP 180
           R+QK++ D+      S       + N+L  +  I PD   Y  G F+  I     YP  P
Sbjct: 27  RIQKDVTDLEIPSTMSTSWPDPIKLNVLHLE--IRPDEGYYKGGKFKFRIQIDDNYPHDP 84

Query: 181 PKISFKTKIYHPNIDEKGQVCLPIIVQ 261
           PK+    KIYHPNID +G VCL I+ Q
Sbjct: 85  PKVKCLNKIYHPNIDIEGNVCLNILRQ 111


>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
           Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 160

 Score = 53.6 bits (123), Expect = 2e-08
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
 Frame = +1

Query: 1   RLQKELNDIRQSGLKSFRDIQ-VDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPF 174
           RL KE    +   +     ++ V + ++  W+ +I  P   PY  G + ++I+    YP 
Sbjct: 7   RLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPI 66

Query: 175 KPPKISFKTKIYHPNID-EKGQVCLPII 255
            PP + F+TKI HPNI    G+VC+ I+
Sbjct: 67  SPPSVYFQTKIVHPNISWTNGEVCMDIL 94


>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
           Hus5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 157

 Score = 52.8 bits (121), Expect = 4e-08
 Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
 Frame = +1

Query: 76  NILTWQGLIVPDNPP--YNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLP 249
           +++ W+ + +P  P   +  G +++ + FP EYP +PPK  F   ++HPN+   G VCL 
Sbjct: 37  DLMNWK-VGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLS 95

Query: 250 IIVQKIG 270
           I+ ++ G
Sbjct: 96  ILNEEEG 102



 Score = 35.5 bits (78), Expect = 0.007
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +3

Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
           E WKPA    Q++  +  L++DP    P + E    F KD+ ++ K      ++++
Sbjct: 101 EGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 156


>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
           Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 227

 Score = 43.6 bits (98), Expect = 3e-05
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
           RL KE   ++++ ++   D +    NIL W  +I  P + PY  G +   + FP +YPFK
Sbjct: 9   RLMKEYLALQKNPVELV-DAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFK 67

Query: 178 PPKISFKT 201
           PP I   T
Sbjct: 68  PPAIRMIT 75


>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
           Mms2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 139

 Score = 33.5 bits (73), Expect = 0.027
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 67  DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNID-EKGQV 240
           D+  +  W   I+ P +  +    + ++I+  A YP  PP ++F ++I  P +D E G+V
Sbjct: 34  DDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKV 93


>SPCC622.07 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 128

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 231 LFINVRVVNLCFETNFRGFEWVFCW 157
           LF+N  V  +C+  N+ GF + FCW
Sbjct: 41  LFLNYVVDIVCYVKNYNGFSF-FCW 64


>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 2104

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 151  NFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIIVQKIGSLL 279
            N P+  P  P K S K +    N D+   +  P IV +  S+L
Sbjct: 1413 NLPSSQPGSPSKRSGKMEALIRNFDQNSSIPDPFIVNQRNSVL 1455


>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 828

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +1

Query: 73  SNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQ 237
           S++ T + LI P  PP  K     E     E  F+P  +  ++ I  P +D + +
Sbjct: 566 SSMQTIESLIHPRFPPLQKHLSPSEFENTFESRFEPVSLENQSHISPPQVDSQSE 620


>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 703

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 367 NFSKIGRNLQRMQKNLPKNTVKNGLQIKYT 456
           NF     N+ R  K L  +T +NG++ KYT
Sbjct: 413 NFKTEDTNVLRYWKTLALSTCENGIEDKYT 442


>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1576

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -1

Query: 206 IFVLKLIFGG--LNGYSAGKLISMRKAPLL*GGLSGTIRPC 90
           + VL+++ G   LN +S+ KLI     PLL G     +R C
Sbjct: 450 LLVLQMLCGAHVLNKFSSLKLIMTHVIPLLPGSYQDLVRRC 490


>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
           role|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 695

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 345 LRAELAEEFLKDRKKFTKNAEEFTKKHSE 431
           L AEL E++LKD+ K  +   E  K  SE
Sbjct: 464 LYAELQEQWLKDKSKKARRRAEREKLRSE 492


>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1389

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +1

Query: 10  KELNDIRQSGLKSFRDIQVDESNILTWQGL 99
           K+L++ +++ L +   I++DE  +L WQGL
Sbjct: 50  KQLSESKEAYLDA---IKIDEKAVLAWQGL 76


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,619,856
Number of Sequences: 5004
Number of extensions: 55218
Number of successful extensions: 162
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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