Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0248
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 156 2e-38
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 71 6e-13
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 69 3e-12
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_23214| Best HMM Match : zf-CW (HMM E-Value=9.6) 60 1e-09
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 52 4e-07
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 47 1e-05
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 41 8e-04
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 41 0.001
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 40 0.001
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 40 0.001
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 40 0.002
SB_47222| Best HMM Match : UQ_con (HMM E-Value=5) 36 0.021
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 33 0.20
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 33 0.26
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 32 0.46
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 31 1.1
SB_5867| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 29 2.5
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_18105| Best HMM Match : RRS1 (HMM E-Value=7.1) 29 4.3
SB_19511| Best HMM Match : Glycos_transf_1 (HMM E-Value=6.2e-23) 28 5.7
SB_9194| Best HMM Match : SWIM (HMM E-Value=0.01) 28 5.7
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_11166| Best HMM Match : CARD (HMM E-Value=0.001) 28 7.5
SB_20195| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_36998| Best HMM Match : TUDOR (HMM E-Value=0) 27 9.9
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 156 bits (378), Expect = 2e-38
Identities = 68/81 (83%), Positives = 77/81 (95%)
Frame = +1
Query: 13 ELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKIS 192
EL+++R+SG K+FRD++VDESNIL WQGLIVP+ PPYNKGAFRIEI FPAEYPFKPPKI+
Sbjct: 1 ELDELRKSGTKTFRDVKVDESNILYWQGLIVPEMPPYNKGAFRIEICFPAEYPFKPPKIT 60
Query: 193 FKTKIYHPNIDEKGQVCLPII 255
FKTKIYHPNIDEKGQVCLPII
Sbjct: 61 FKTKIYHPNIDEKGQVCLPII 81
Score = 114 bits (274), Expect = 7e-26
Identities = 60/105 (57%), Positives = 72/105 (68%)
Frame = +3
Query: 132 CFPH*D*LSSRIPIQTPEN*FQNKDLPP*H**KGSGVPAHHSAENWKPATKTDQVIQALV 311
CFP + P + P+ F+ K P KG S ENWKPATKT+QVIQAL+
Sbjct: 47 CFP------AEYPFKPPKITFKTKIYHPNIDEKGQVCLPIISPENWKPATKTEQVIQALL 100
Query: 312 ALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSEKRPTD 446
ALV+DPEPEHPLRA+LAEE+ KD+KKF KNAE+ TKK+ EKRP D
Sbjct: 101 ALVHDPEPEHPLRADLAEEYSKDKKKFMKNAEDCTKKYGEKRPAD 145
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 71.3 bits (167), Expect = 6e-13
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +1
Query: 97 LIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 246
LI + PY+KG F+++I P YPF+PPK+ F T IYHPNID G++CL
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICL 51
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +3
Query: 267 WKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 422
WKPA V+ ++ L+ +P P+ PL AE++ EF ++ +F + A+E+T K
Sbjct: 62 WKPALNISSVLSTILILMAEPNPDDPLMAEISNEFKYNKAQFLEKAKEWTLK 113
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 180
LQ EL + + ++ F DESN W I P Y G F+ ++FP +YP+ P
Sbjct: 1129 LQLELKKLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSP 1188
Query: 181 PKISFKTKIYHPNIDEKGQVCLPII 255
P F TK++HPNI E G VC+ I+
Sbjct: 1189 PTFRFLTKMWHPNIYESGDVCISIL 1213
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +3
Query: 258 AENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAE 407
+E W P ++ ++++L+N+P P + + F K R+ K++E
Sbjct: 1227 SERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRETKGKDSE 1276
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 62.1 bits (144), Expect = 4e-10
Identities = 24/79 (30%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +1
Query: 22 DIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFK 198
++++ ++ F D+ ++ W+ ++V P Y +G F+ + FP EYP +PP ++F
Sbjct: 343 ELQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFI 402
Query: 199 TKIYHPNIDEKGQVCLPII 255
+ I+HPN+ + G+VC+ I+
Sbjct: 403 SDIWHPNVHKNGEVCISIL 421
>SB_23214| Best HMM Match : zf-CW (HMM E-Value=9.6)
Length = 69
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVP 108
RL KEL+++R+SG K+FRD++VDESNIL WQGLIVP
Sbjct: 34 RLGKELDELRKSGTKTFRDVKVDESNILYWQGLIVP 69
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Frame = +1
Query: 100 IVPDNPPYNKGAFRIEIN----FPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 246
++ ++PP+ + ++ N A PF+PPK+ F T IYHPNID G++CL
Sbjct: 13 LLAEDPPHGASCWPVDENRIDKLEASTPFEPPKVRFVTPIYHPNIDSSGRICL 65
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +3
Query: 267 WKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 422
WKPA V+ ++ L+ +P P+ PL AE++ EF ++ +F + A+E+T K
Sbjct: 76 WKPALNISSVLSTILILMAEPNPDDPLMAEISNEFKYNKAQFLEKAKEWTLK 127
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +1
Query: 70 ESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLP 249
E N+ ++ I P + Y G F+ + +YP P I+ KTKIYHPN+D VC+
Sbjct: 33 EDNMEEFELQITPTDGAYRGGQFKFSVR-TTDYPNVAPSINCKTKIYHPNMDGYDGVCMS 91
Query: 250 II 255
++
Sbjct: 92 LL 93
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Frame = +1
Query: 67 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTK-----IYHPNIDE 228
D+ +I LI P + PY G F I P +YP +PP++ T ++PN+
Sbjct: 6 DKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYR 65
Query: 229 KGQVCLPII 255
G+VCL II
Sbjct: 66 NGKVCLSII 74
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 70 ESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNID-EKGQVCL 246
E N+ ++ I P + Y G F+ + +YP PP IYHPN+D + G VCL
Sbjct: 33 EDNMEEFELQITPTDGAYRGGQFKFSVK-TEDYPNTPPVPRCVNNIYHPNMDLDDGSVCL 91
Query: 247 PII 255
++
Sbjct: 92 SLL 94
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 88 WQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKI 189
W I+ P Y G F ++I+FP +YPFKPPK+
Sbjct: 54 WYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 76 NILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPK 186
++ W I+ P Y G F ++I+FP++YPFKPPK
Sbjct: 163 DLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPPK 200
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 76 NILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPK 186
++ W I+ P Y G F ++I+FP++YPFKPPK
Sbjct: 123 DLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPPK 160
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 106 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI---YHPNIDEKGQVCL 246
P PY+ G F +I PA YP PP + + +PN+ E G+VC+
Sbjct: 643 PAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCI 692
>SB_47222| Best HMM Match : UQ_con (HMM E-Value=5)
Length = 46
Score = 36.3 bits (80), Expect = 0.021
Identities = 14/42 (33%), Positives = 29/42 (69%)
Frame = +3
Query: 303 ALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
++ +L+ DP P+ PL ++A + D+ K+ + A+E+TKK++
Sbjct: 4 SICSLLCDPNPDDPLVPDIARIYKTDKPKYNELAKEWTKKYA 45
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 35.1 bits (77), Expect = 0.050
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 431
++WKP QV+ + L+ P PE L E + L+ ++K A+ FT+ H++
Sbjct: 169 KDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAKMFTEIHAK 225
Score = 30.3 bits (65), Expect = 1.4
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1
Query: 193 FKTKIYHPNIDEKGQVCL 246
F TKI+HPN+ + G++C+
Sbjct: 147 FLTKIFHPNVAKNGEICV 164
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
RL +E ++R + Q E N+ W + P + + G + I P EYP K
Sbjct: 14 RLMREAKELRNA--TELYHAQPLEDNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMK 71
Query: 178 PPKISFKTKIYHPNIDEKGQVCL 246
PP I T I +K +CL
Sbjct: 72 PPSIMLLTPNGRFEIGKK--ICL 92
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 106 PDNPPYNKGAFRIEINFPAEYPFKPPKIS 192
P PY G +++ ++ P +YPFK P I+
Sbjct: 57 PVGTPYEGGVWKVRVDLPEKYPFKSPSIA 85
>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
Length = 55
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 67 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKT 201
DE+ + + L+ P + PY++G F +I FP YP PP + T
Sbjct: 1 DENRMDFARALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 32.7 bits (71), Expect = 0.26
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 106 PDNPPYNKGAFRIEINFPAEYPFKPPK 186
P P+ G + ++I P YPF PPK
Sbjct: 696 PPETPFEGGTYNLDIVIPETYPFNPPK 722
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 31.9 bits (69), Expect = 0.46
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 267 WKPATKTDQVIQALVALVNDPEPEHPLRAELAEEF 371
W PA + V+ ++ AL++ P P+ PL ++AE++
Sbjct: 3 WSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQW 37
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 76 NILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTK-IYHPNIDEKGQVCLP 249
N+ W + P + + G + I P EYP KPP I T +Y+ + + +P
Sbjct: 2 NLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLTVWLYYTSTVSR----IP 57
Query: 250 IIVQKIGSLLPRLIKLS 300
V++I L+ +I+ S
Sbjct: 58 YAVERIYCLVSIIIQKS 74
>SB_5867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 369 FLKDRKKFTKNAEEFTKKHSEKRPTD*IHYKNFKF 473
FL+D KKF +N E K EK D + YK KF
Sbjct: 303 FLEDFKKFPRNDAEVLVKVIEKIHPDFVEYKGAKF 337
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 89 GKV*LF-QTTHLTTKVLSALRLTFQQNTHSNPRKLVSKQRFTTLTLMKRVR-CACPS*CR 262
G+V F + T T ++ + R NT+S P +L++ Q +T+ KR+ C+ S C
Sbjct: 168 GEVLTFKEITWSTLRIDAFAREQDNSNTNSAPIRLITSQSSLHITIKKRIEDCSVLSACL 227
Query: 263 KL 268
KL
Sbjct: 228 KL 229
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 10/98 (10%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQ---------GLIVPDNPPYNKGAFRIEIN 153
RL KE D+ + + F VD+ N+ W L+ D + I
Sbjct: 738 RLMKEFQDVSRKTERIFSAELVDD-NLFEWNVKLHTIDGDSLLYRDMVETGSKFILLNIT 796
Query: 154 FPAEYPFKPPKIS-FKTKIYHPNIDEKGQVCLPIIVQK 264
FP +PF PP + +I + + G +C+ ++ K
Sbjct: 797 FPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELLTPK 834
>SB_18105| Best HMM Match : RRS1 (HMM E-Value=7.1)
Length = 147
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = +2
Query: 101 LFQTTHLTTKVLSALRLTFQQNTHSNPRKL------VSKQRFTTLTLMKRVRCACPS*CR 262
LF T HLTT V L + T S+ RK S+ R+T L+ + R P+ +
Sbjct: 7 LFLTVHLTTSVEKPAVLNRLRTTRSSSRKPCQSRSGFSRSRYTRTELLIQARWPVPTTRK 66
Query: 263 KLEACYQ 283
K C++
Sbjct: 67 KRIVCHR 73
>SB_19511| Best HMM Match : Glycos_transf_1 (HMM E-Value=6.2e-23)
Length = 496
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 288 DQVIQALVALVN-DPEPEHPLRAELAEEFLKDRKKFTKN 401
D VI+ ++++ PE +HPL+ + EFLK + K +++
Sbjct: 299 DGVIKTIISIGQFRPEKDHPLQLKAFAEFLKGQPKSSRS 337
>SB_9194| Best HMM Match : SWIM (HMM E-Value=0.01)
Length = 701
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +3
Query: 339 HPLRAELAEEFLKDR------KKFTKNAEEFTKKHSEKRPTD*IHYKNFK 470
+P ++A L+++ K +N E +K EK P D HY+ F+
Sbjct: 77 YPTNKDIANAILREKTRQCHSKADQENLEHLVRKWKEKSPDDFFHYRRFQ 126
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 136 FRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQ 237
+ ++I YP KPP + F +KI ++ KG+
Sbjct: 8 YNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKGE 41
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 136 FRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQ 237
+ ++I YP KPP + F +KI ++ KG+
Sbjct: 8 YNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKGE 41
>SB_11166| Best HMM Match : CARD (HMM E-Value=0.001)
Length = 720
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 61 QVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKI 189
Q+ E N+L GL+ +NPPY + + IN +EY PKI
Sbjct: 528 QMGEDNVL---GLVDHENPPYTDVSTQWLINLMSEY-ISGPKI 566
>SB_20195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1351
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +3
Query: 246 AHHSAENWKPATKTDQVIQALVALVNDPE-----PEHPLRAELAEEFLK 377
AHH+ + + A +T ++ ALV + PE P+HP R E K
Sbjct: 1190 AHHAEPDKQAAEQTARMPLALVKRITSPEPPATRPKHPGRVEAGRRLAK 1238
>SB_36998| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 2538
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 267 WKPATKTDQVIQALVALVNDPEPEHPLRAEL 359
W TKT +++ L+A + + P P++A L
Sbjct: 2251 WLQPTKTASLLEELMATIAERHPSEPMQASL 2281
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,838,420
Number of Sequences: 59808
Number of extensions: 380945
Number of successful extensions: 1084
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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