Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0248
(647 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 92 3e-19
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 86 2e-17
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 84 7e-17
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 84 7e-17
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 84 9e-17
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 83 2e-16
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 83 2e-16
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 83 2e-16
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 83 2e-16
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 83 2e-16
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 83 2e-16
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 82 4e-16
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 81 8e-16
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 81 8e-16
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 80 1e-15
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 73 2e-13
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 71 7e-13
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 71 9e-13
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 70 1e-12
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 69 2e-12
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 69 2e-12
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 69 2e-12
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 69 3e-12
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 68 5e-12
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 67 8e-12
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 67 1e-11
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 66 2e-11
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 65 3e-11
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 65 3e-11
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 65 3e-11
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 64 6e-11
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 64 1e-10
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 60 2e-09
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 60 2e-09
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 58 4e-09
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 57 1e-08
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 56 3e-08
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 54 8e-08
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 48 4e-06
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 44 9e-05
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 44 1e-04
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 44 1e-04
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 44 1e-04
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 42 4e-04
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 41 6e-04
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 39 0.002
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 39 0.002
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 38 0.008
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 37 0.010
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 37 0.010
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 36 0.018
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 33 0.16
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 31 0.50
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 31 0.66
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 31 0.87
At1g71720.1 68414.m08290 S1 RNA-binding domain-containing protei... 31 0.87
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 30 1.2
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 29 3.5
At5g20660.1 68418.m02454 24 kDa vacuolar protein, putative simil... 28 4.7
At4g21770.1 68417.m03150 pseudouridine synthase family protein c... 28 4.7
At5g08420.1 68418.m00992 expressed protein 28 6.1
At1g80240.1 68414.m09390 expressed protein contains Pfam profile... 28 6.1
At3g62360.1 68416.m07005 expressed protein 27 8.1
At1g75000.1 68414.m08707 GNS1/SUR4 membrane family protein conta... 27 8.1
At1g02230.1 68414.m00161 no apical meristem (NAM) family protein... 27 8.1
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 92.3 bits (219), Expect = 3e-19
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ +EL D+++ + V E +I WQ I+ P + PY+ G F + I+F ++YPFK
Sbjct: 5 RISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFK 64
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
PPK++FKTK+YHPNID KG +CL I+ ++
Sbjct: 65 PPKVNFKTKVYHPNIDSKGSICLDILKEQ 93
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/91 (31%), Positives = 49/91 (53%)
Frame = +3
Query: 156 SSRIPIQTPEN*FQNKDLPP*H**KGSGVPAHHSAENWKPATKTDQVIQALVALVNDPEP 335
SS P + P+ F+ K P KGS + E W PA T +V+ ++ +L+ DP P
Sbjct: 58 SSDYPFKPPKVNFKTKVYHPNIDSKGS-ICLDILKEQWSPAPTTSKVLLSICSLLTDPNP 116
Query: 336 EHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
PL E+A + D+ K+ A+++T+K++
Sbjct: 117 NDPLVPEIAHLYKVDKSKYESTAQKWTQKYA 147
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 85.8 bits (203), Expect = 2e-17
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ KEL D+++ + V E ++ WQ I+ P PY G F + I+FP +YPFK
Sbjct: 5 RILKELKDLQKDPPSNCSAGPVAE-DMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFK 63
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
PPK+SFKTK+YHPNI+ G +CL I+ ++
Sbjct: 64 PPKVSFKTKVYHPNINSNGSICLDILKEQ 92
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
E W PA +V+ ++ +L+ DP P+ PL E+A + DR K+ A +T+K++
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYA 146
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 84.2 bits (199), Expect = 7e-17
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ KEL D+++ S V E ++ WQ I+ P + PY+ G F + I+FP +YPFK
Sbjct: 35 RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 93
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
PPK++F+TK++HPNI+ G +CL I+ ++
Sbjct: 94 PPKVAFRTKVFHPNINSNGSICLDILKEQ 122
Score = 47.2 bits (107), Expect = 9e-06
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
E W PA +V+ ++ +L+ DP P+ PL E+A + D+ K+ A +T+K++
Sbjct: 121 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYA 176
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 84.2 bits (199), Expect = 7e-17
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ KEL D+++ S V E ++ WQ I+ P + PY+ G F + I+FP +YPFK
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 63
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
PPK++F+TK++HPNI+ G +CL I+ ++
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQ 92
Score = 47.2 bits (107), Expect = 9e-06
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
E W PA +V+ ++ +L+ DP P+ PL E+A + D+ K+ A +T+K++
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYA 146
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 83.8 bits (198), Expect = 9e-17
Identities = 36/89 (40%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ KEL D+++ S V E ++ WQ I+ P + PY+ G F + I+FP +YPFK
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 63
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
PPK++F+TK++HPN++ G +CL I+ ++
Sbjct: 64 PPKVAFRTKVFHPNVNSNGSICLDILKEQ 92
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
E W PA +V+ ++ +L+ DP P+ PL E+A + DR K+ A +T+K++
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYA 146
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ KEL D+++ S V E ++ WQ I+ P PY+ G F + I+FP +YPFK
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 63
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
PPK++F+TK++HPNI+ G +CL I+ ++
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQ 92
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ KEL D+++ S V E ++ WQ I+ P PY+ G F + I+FP +YPFK
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 63
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
PPK++F+TK++HPNI+ G +CL I+ ++
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQ 92
Score = 48.0 bits (109), Expect = 5e-06
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
E W PA +V+ ++ +L+ DP P+ PL E+A + DR K+ A +T+K++
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYA 146
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ KEL D+++ S V E ++ WQ I+ P PY+ G F + I+FP +YPFK
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 63
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
PPK++F+TK++HPNI+ G +CL I+ ++
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQ 92
Score = 48.0 bits (109), Expect = 5e-06
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
E W PA +V+ ++ +L+ DP P+ PL E+A + DR K+ A +T+K++
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYA 146
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +1
Query: 43 KSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPN 219
+S I + +NI W +I PD PY G F + I FP +YPFKPPK +FKT IYHPN
Sbjct: 24 ESLFSIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPN 83
Query: 220 IDEKGQVCLPIIVQK 264
I+++G +C+ I+ K
Sbjct: 84 INDEGSICMNILKDK 98
Score = 47.2 bits (107), Expect = 9e-06
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
+ W PA ++V+ +++ L+ P P+ PL E+ + F +R +F + A EFT +H+
Sbjct: 97 DKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTARHA 152
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ KEL D+++ S V E ++ WQ I+ P PY G F + I+FP +YPFK
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 63
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
PPK++F+TK++HPNI+ G +CL I+ ++
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQ 92
Score = 47.6 bits (108), Expect = 7e-06
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
E W PA +V+ ++ +L+ DP P+ PL E+A + D+ K+ A +T+K++
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYA 146
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ KEL D+++ S V E ++ WQ I+ P PY G F + I+FP +YPFK
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 63
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
PPK++F+TK++HPNI+ G +CL I+ ++
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQ 92
Score = 47.6 bits (108), Expect = 7e-06
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
E W PA +V+ ++ +L+ DP P+ PL E+A + D+ K+ A +T+K++
Sbjct: 91 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYA 146
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 81.8 bits (193), Expect = 4e-16
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ KEL D+++ S ++ WQ I+ P PY+ G F + I+FP +YPFK
Sbjct: 5 RILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 64
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
PPK++F+TK++HPNI+ G +CL I+ ++
Sbjct: 65 PPKVAFRTKVFHPNINSNGSICLDILKEQ 93
Score = 48.0 bits (109), Expect = 5e-06
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
E W PA +V+ ++ +L+ DP P+ PL E+A + DR K+ A +T+K++
Sbjct: 92 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYA 147
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 80.6 bits (190), Expect = 8e-16
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ KEL D+++ S + ++ WQ I+ P + P+ G F + I+FP +YPFK
Sbjct: 5 RINKELRDLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFK 63
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
PPK++F+TK+YHPNI+ G +CL I+ ++
Sbjct: 64 PPKVAFRTKVYHPNINSNGSICLDILKEQ 92
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
E W PA +V+ ++ +L+ DP P+ PL E+A + DR K+ A+ +T+K++
Sbjct: 91 EQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYA 146
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 80.6 bits (190), Expect = 8e-16
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ KEL D+++ S + ++ WQ I+ P + P+ G F + I+FP +YPFK
Sbjct: 5 RINKELRDLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFK 63
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
PPK++F+TK+YHPNI+ G +CL I+ ++
Sbjct: 64 PPKVAFRTKVYHPNINSNGSICLDILKEQ 92
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
E W PA +V+ ++ +L+ DP P+ PL E+A + DR K+ A+ +T+K++
Sbjct: 91 EQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYA 146
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ KEL ++++ S E ++ WQ I+ P+ PY+ G F + I+FP +YPFK
Sbjct: 5 RILKELKELQRDPPVSCSAGPTGE-DMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFK 63
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPII 255
PPK+ F+TK++HPNI+ G +CL I+
Sbjct: 64 PPKVVFRTKVFHPNINSNGNICLDIL 89
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
+ W PA +V+ ++ +L+ DP P+ PL E+A + D+ K+ A +T+K++
Sbjct: 91 DQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYA 146
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Frame = +1
Query: 76 NILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPI 252
NI W+ + P PY KG F + ++ P +YP++PPKI+FKTKI+HPNI E G++ + I
Sbjct: 58 NIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDI 117
Query: 253 IVQKIGSLLP-RLIKLS 300
+ + S L L+ LS
Sbjct: 118 LGSRWSSALTINLVLLS 134
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 70.9 bits (166), Expect = 7e-13
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQV--DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYP 171
RL KE ++++ + DIQ+ D++NI W LI P PY G F++ + P YP
Sbjct: 7 RLFKEYKEVQREKVAD-PDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYP 65
Query: 172 FKPPKISFKTKIYHPNIDEK-GQVCLPII 255
+PP++ F TKI+HPN+ K G++CL I+
Sbjct: 66 LQPPQVRFLTKIFHPNVHFKTGEICLDIL 94
Score = 34.3 bits (75), Expect = 0.071
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +3
Query: 168 PIQTPEN*FQNKDLPP*H**KGSGVPAHHSAENWKPATKTDQVIQALVALVNDPEPEHPL 347
P+Q P+ F K P K + W PA V +A++AL+ PEP+ PL
Sbjct: 65 PLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPL 124
Query: 348 RAELAEEFLK-DRKKFTKNAEEFTK 419
+ D + F A+ +T+
Sbjct: 125 NCDSGNLLRSGDVRGFNSMAQMYTR 149
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 70.5 bits (165), Expect = 9e-13
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGA-FRIEINFPAEYPFK 177
RLQ EL + G +E NI W+G I +G +R+ ++F +YPFK
Sbjct: 39 RLQSELMGLMMGGGPGISAFP-EEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFK 97
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPIIVQKIGS 273
PPK+ F+T +HPN+D G +CL I+ K S
Sbjct: 98 PPKVKFETCCFHPNVDVYGNICLDILQDKWSS 129
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+QKEL D ++ S + N+ G I P PY G F+I+I P YPF+
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 178 PPKISFKTKIYHPNI-DEKGQVCLPII 255
PPK+ F TK++HPNI + G +CL I+
Sbjct: 66 PPKMQFSTKVWHPNISSQSGAICLDIL 92
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSEK 434
+ W PA + ++ AL++ PEP+ P A +AE+++K+ + F A +T+ ++K
Sbjct: 94 DQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTARYWTETFAKK 151
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +1
Query: 70 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 246
E N+ + +I+ P PY G F++E+ P EYP PK+ F TKIYHPNID+ G++CL
Sbjct: 31 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 90
Query: 247 PIIVQK 264
I+ K
Sbjct: 91 DILKDK 96
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
+ W PA + V+ ++ AL++ P P+ PL +A+ + + + A+E+T+ ++
Sbjct: 95 DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLYA 150
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +1
Query: 70 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 246
E N+ + +I+ P PY G F++E+ P EYP PK+ F TKIYHPNID+ G++CL
Sbjct: 31 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 90
Query: 247 PIIVQK 264
I+ K
Sbjct: 91 DILKDK 96
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +1
Query: 70 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 246
E N+ + +I+ P PY G F++E+ P EYP PK+ F TKIYHPNID+ G++CL
Sbjct: 31 EENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 90
Query: 247 PIIVQK 264
I+ K
Sbjct: 91 DILKDK 96
Score = 37.1 bits (82), Expect = 0.010
Identities = 14/56 (25%), Positives = 33/56 (58%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
+ W PA + V+ ++ AL++ P P+ PL +A+ + + + + A+E+T+ ++
Sbjct: 95 DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYA 150
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 68.9 bits (161), Expect = 3e-12
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +1
Query: 97 LIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIIVQK 264
++ P PY G F++E+ P EYP PK+ F TKIYHPNID+ G++CL I+ K
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK 63
Score = 37.1 bits (82), Expect = 0.010
Identities = 14/56 (25%), Positives = 33/56 (58%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 428
+ W PA + V+ ++ AL++ P P+ PL +A+ + + + + A+E+T+ ++
Sbjct: 62 DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYA 117
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 180
LQK+L D+ + + F VDE N+ W I+ P + Y G F ++FP YP P
Sbjct: 10 LQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSP 69
Query: 181 PKISFKTKIYHPNIDEKGQVCLPII 255
P ++F ++++HPN+ G+VC+ I+
Sbjct: 70 PTVTFTSEMWHPNVYSDGKVCISIL 94
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 67.3 bits (157), Expect = 8e-12
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Frame = +1
Query: 76 NILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPI 252
N+ W I+ P PY G F ++I FP++YPFKPPK+ FKT+IYH N+D G + + I
Sbjct: 64 NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNI 123
Query: 253 I 255
+
Sbjct: 124 L 124
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 431
++W PA +V+QA+ ++ PEP P +A +L DR+K + A+E+T + ++
Sbjct: 126 DSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 180
LQK+L D+ + + F VDE NI W I+ P + Y G F ++FP YP P
Sbjct: 9 LQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSP 68
Query: 181 PKISFKTKIYHPNIDEKGQVCLPII 255
P + F + I+HPN+ G+VC+ I+
Sbjct: 69 PTVRFTSDIWHPNVYPDGRVCISIL 93
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 66.1 bits (154), Expect = 2e-11
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +1
Query: 106 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPII 255
P++ Y G F ++I P YPF+PP +SF T IYHPNID G++CL I+
Sbjct: 54 PEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDIL 103
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +3
Query: 267 WKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 431
W+P+ V+ ++ L+++P P+ L E++ E+ +R+ F A E T+K+++
Sbjct: 111 WQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYAK 165
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 65.3 bits (152), Expect = 3e-11
Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +1
Query: 70 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 246
++NI+ W +I PD+ P++ G F++ + F +YP KPP + F ++++HPNI G +CL
Sbjct: 30 DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICL 89
Query: 247 PII 255
I+
Sbjct: 90 DIL 92
Score = 33.1 bits (72), Expect = 0.16
Identities = 11/52 (21%), Positives = 26/52 (50%)
Frame = +3
Query: 267 WKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 422
W P ++ ++ +L+ DP P P +E A F + ++++ + E ++
Sbjct: 96 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQ 147
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 65.3 bits (152), Expect = 3e-11
Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +1
Query: 70 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 246
++NI+ W +I PD+ P++ G F++ + F +YP KPP + F ++++HPNI G +CL
Sbjct: 30 DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICL 89
Query: 247 PII 255
I+
Sbjct: 90 DIL 92
Score = 30.7 bits (66), Expect = 0.87
Identities = 9/52 (17%), Positives = 26/52 (50%)
Frame = +3
Query: 267 WKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 422
W P ++ ++ +L+ DP P P +E A + + ++++ + + ++
Sbjct: 96 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQ 147
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 65.3 bits (152), Expect = 3e-11
Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +1
Query: 70 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 246
++NI+ W +I PD+ P++ G F++ + F +YP KPP + F ++++HPNI G +CL
Sbjct: 30 DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICL 89
Query: 247 PII 255
I+
Sbjct: 90 DIL 92
Score = 30.7 bits (66), Expect = 0.87
Identities = 9/52 (17%), Positives = 26/52 (50%)
Frame = +3
Query: 267 WKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 422
W P ++ ++ +L+ DP P P +E A + + ++++ + + ++
Sbjct: 96 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQ 147
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Frame = +1
Query: 1 RLQKELNDIRQS---GLKSFRDIQVDESNILTWQGLIVPDNPPYNKGA-FRIEINFPAEY 168
RLQ EL + G+ +F + E NI W+G I +G +R+ + F +Y
Sbjct: 40 RLQSELMGLMMGADPGISAFPE----EDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDY 95
Query: 169 PFKPPKISFKTKIYHPNIDEKGQVCLPIIVQKIGS 273
PFK PK+ F+T +HPN+D G +CL I+ K S
Sbjct: 96 PFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSS 130
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 63.7 bits (148), Expect = 1e-10
Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +1
Query: 70 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 246
++NI+ W LI P++ P++ G F++ ++F +YP KPP + F ++++HPNI G +CL
Sbjct: 30 DNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICL 89
Query: 247 PII 255
I+
Sbjct: 90 DIL 92
Score = 34.7 bits (76), Expect = 0.054
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +3
Query: 267 WKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 422
W P V+ ++ +L+ DP P+ P AE A F ++++++ + E ++
Sbjct: 96 WSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQ 147
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +1
Query: 106 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIIVQ 261
P + Y G ++I + P YP+K P + F TKIYHPN+DE G VCL +I Q
Sbjct: 39 PKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQ 91
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 261 ENWKPATKTDQVIQA-LVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 431
+ W P V + L L+ P P PL E A ++DR + + +E+ +K+++
Sbjct: 91 QTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAK 148
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +1
Query: 106 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIIVQ 261
P + Y G ++I + P YP+K P + F TKIYHPN+DE G VCL +I Q
Sbjct: 39 PKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQ 91
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 261 ENWKPATKTDQVIQA-LVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSEKR 437
+ W P V + L L+ P P PL E A ++DR + + +E+ +K+++ R
Sbjct: 91 QTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYAKPR 150
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 58.4 bits (135), Expect = 4e-09
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +1
Query: 106 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIIVQ 261
P + Y G ++I++ P YP+K P + F KIYHPN+DE G VCL +I Q
Sbjct: 39 PTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQ 91
Score = 30.7 bits (66), Expect = 0.87
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = +3
Query: 153 LSSRIPIQTPEN*FQNKDLPP*H**KGSGVPAHHSAENWKPATKTDQVIQA-LVALVNDP 329
L P ++P F NK P V + W P V ++ L L+ P
Sbjct: 55 LPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYP 114
Query: 330 EPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 431
P P E A ++DR + +E+ +K+++
Sbjct: 115 NPSDPFNGEAASLLMRDRAAYELKVKEYCEKYAK 148
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/82 (31%), Positives = 42/82 (51%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKP 180
+L KEL + +S + + DE + P PY G FR+++ ++P P
Sbjct: 14 QLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSP 73
Query: 181 PKISFKTKIYHPNIDEKGQVCL 246
PK F TKI+HPN+ G++C+
Sbjct: 74 PKGYFMTKIFHPNVASNGEICV 95
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 70 ESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLP 249
+++++ ++ I PD Y G F YP + PK+ KTK+YHPNID +G VCL
Sbjct: 57 KNDLMNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLN 116
Query: 250 II 255
I+
Sbjct: 117 IL 118
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 261 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKN 401
E+WKP + VI L L +P E PL E A + K F N
Sbjct: 120 EDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYN 166
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 54.0 bits (124), Expect = 8e-08
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 40 LKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHP 216
L +++ D NI W I+ P + Y G F + FP YP PP + F + ++HP
Sbjct: 53 LSPYQNQSCDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHP 112
Query: 217 NIDEKGQVCLPII 255
N+ G+VC+ I+
Sbjct: 113 NVYSDGRVCISIL 125
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 76 NILTWQGLIVPD-NPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPI 252
N++ W I + G F + ++F +YP KPPK F +HPN+ G VCL I
Sbjct: 38 NLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
Query: 253 IVQKIG 270
+ + G
Sbjct: 98 LNEDYG 103
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +3
Query: 267 WKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKH 425
W+PA Q++ + L++ P P P + + F +D ++ K + +K++
Sbjct: 104 WRPAITVKQILVGIQDLLDTPNPADPAQTDGYHLFCQDPVEYKKRVKLQSKQY 156
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 44.0 bits (99), Expect = 9e-05
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +1
Query: 4 LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 180
+QKE I L ++ ES I + +I+ + PY+ G F +I FP YP P
Sbjct: 610 IQKEWK-ILDKNLPETIFVRACESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVP 668
Query: 181 PKISFKT--KIYHPNIDEKGQVCLPII 255
PK+ + + +PN+ + G+VCL +I
Sbjct: 669 PKVHYHSGGLRINPNLYKCGKVCLSLI 695
Score = 40.7 bits (91), Expect = 8e-04
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +1
Query: 25 IRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKT 201
I ++ L ++ ES + + +I+ + PY+ G F +I FP YP PP + + +
Sbjct: 282 ILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHS 341
Query: 202 --KIYHPNIDEKGQVCLPIIVQKIGS 273
+PN+ G+VCL ++ GS
Sbjct: 342 GGLRINPNLYNCGKVCLSLLGTWAGS 367
Score = 33.9 bits (74), Expect = 0.094
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 97 LIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKT--KIYHPNIDEKGQVCLPI 252
+I + PY+ G F +I FP YP PP + + + +PN+ G+V + I
Sbjct: 953 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+ +E+ +++ + F + ++E NI WQ I P + + G + I PA+YPFK
Sbjct: 15 RILQEVKEMQANPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFK 73
Query: 178 PPKISFKTKIYHPNIDEKGQVCLPI 252
PP SF + + ++CL I
Sbjct: 74 PP--SFMLLTPNGRFETNTKICLSI 96
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNI-LTWQGLIVPDNPPYNKGAFRIEINFPAEYPFK 177
++Q+E +++ ++ L + ++V E + L L+ PY+ G F +I P +YP +
Sbjct: 666 KVQQEWSNL-EANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHE 724
Query: 178 PPKISFKT--KIYHPNIDEKGQVCLPIIVQKIGS 273
PP + + + +PN+ E G+VCL ++ GS
Sbjct: 725 PPMVHYHSGGMRLNPNLYESGRVCLSLLNTWSGS 758
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPP--YNKGAFRIEINFPAEYPF 174
RLQKEL++ + + FR D N+ W + V P Y +++++ FP YP
Sbjct: 19 RLQKELSEWQLNPPTGFRHKVTD--NLQKWT-IDVTGAPGTLYANETYQLQVEFPEHYPM 75
Query: 175 KPPKISFKTKI-YHPNIDEKGQVCLPII 255
+ P++ F + HP+I G +CL I+
Sbjct: 76 EAPQVVFVSPAPSHPHIYSNGHICLDIL 103
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQ-GLIVPDNPPYNKGAFRIEINFPAEYPFK 177
RLQKEL + + + F+ D N+ W +I Y ++++++FP YP +
Sbjct: 19 RLQKELVEWQMNPPTGFKHKVTD--NLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPME 76
Query: 178 PPKISF-KTKIYHPNIDEKGQVCLPII 255
P++ F HP+I G +CL I+
Sbjct: 77 SPQVIFLHPAPLHPHIYSNGHICLDIL 103
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 41.1 bits (92), Expect = 6e-04
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPP--YNKGAFRIEINFPAEYPF 174
RLQKEL++ + + F+ D N+ W + V P Y + +++ FP YP
Sbjct: 19 RLQKELSEWQVNPPTGFKHRVTD--NLQKWV-IEVTGAPGTLYANETYNLQVEFPQHYPM 75
Query: 175 KPPKISFKTKI-YHPNIDEKGQVCLPII 255
+ P++ F HP+I G +CL I+
Sbjct: 76 EAPQVIFVPPAPLHPHIYSNGHICLDIL 103
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPP---YNKGAFRIEINFPAEYP 171
RLQKE + + + F+ D N+ W +I P Y +++++ FP YP
Sbjct: 19 RLQKEFMEWQTNPPSGFKHRVSD--NLQRW--IIEVHGVPGTLYANETYQLQVEFPEHYP 74
Query: 172 FKPPKISFKTKI-YHPNIDEKGQVCLPII 255
+ P++ F+ HP+I G +CL ++
Sbjct: 75 MEAPQVIFQHPAPLHPHIYSNGHICLDVL 103
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 118 PYNKGAFRIEINFPAEYPFKPPKISFKTKIY--HPNIDEKGQVCLPII 255
PY G F + + P++YP PP + + + +PN+ E+G+VCL ++
Sbjct: 893 PYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLL 940
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
R+Q E I + L ++ ES + + +I+ PY+ G F +I FP YP
Sbjct: 336 RIQDEWR-ILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPST 394
Query: 178 PPKISFKT--KIYHPNIDEKGQVCLPII 255
PP + + + +PN+ G+VCL ++
Sbjct: 395 PPIVHYHSGGLRINPNLYNCGKVCLSLL 422
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
RLQKE + + + S + ++IL W ++ + P+ G + +I FP EYP+K
Sbjct: 9 RLQKEYRALCKEPV-SHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 178 PPKISFKT 201
PP I+ T
Sbjct: 68 PPGITMTT 75
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 177
RLQKE + + + S + ++IL W ++ + P+ G + +I FP EYP+K
Sbjct: 9 RLQKEYRALCKEPV-SHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 178 PPKISFKT 201
PP I+ T
Sbjct: 68 PPGITMTT 75
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 37 GLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI 207
G S+ D+ + +W G I+ P N Y F++++ EYP PP + F+T+I
Sbjct: 30 GTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRI 87
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 37 GLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI 207
G S+ D+ + +W G I+ P N Y F++++ +YP PP + F+++I
Sbjct: 30 GTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRI 87
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 67 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI 207
D+ + +W G I+ P N + +++++ +YP KPP + F ++I
Sbjct: 41 DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 88
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 31.1 bits (67), Expect = 0.66
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 67 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI 207
D+ + +W G I+ P N + +++++ +YP KPP + F +++
Sbjct: 42 DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 89
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 30.7 bits (66), Expect = 0.87
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 67 DESNILTWQGLIV-PDNPPYNKGA-FRIEINFPAEYPFKPPKISFKTKI 207
D+ + +W G I+ P N ++G +++++ +YP KPP + F ++I
Sbjct: 41 DDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 89
>At1g71720.1 68414.m08290 S1 RNA-binding domain-containing protein
contains Pfam domain, PF00575: S1 RNA binding domain
Length = 487
Score = 30.7 bits (66), Expect = 0.87
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +3
Query: 282 KTDQVIQALVALVNDPEPEHPLRAELAEE---FLKDRKKFTKNAEEFTKKHSEKRP 440
+ D+ ++ LV P+ A+L E F+ DR+K AEE KK+ EK P
Sbjct: 395 QVDESVKVLVVKSLFPDKISLSIADLESEPGLFISDREKVFTEAEEMAKKYREKMP 450
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 67 DESNILTWQGLIV-PDNPPYNKGA-FRIEINFPAEYPFKPPKISFKTKI 207
D+ + +W G I+ P N ++G +++++ +YP KPP + F +++
Sbjct: 42 DDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 90
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +3
Query: 258 AENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSEK 434
AEN P + D L LV E E +LAEE + KK ++A KK E+
Sbjct: 433 AENLMPKSDEDDADICLTRLVKSLEEEKEKAKKLAEE--EKMKKAARDARRIKKKAEEE 489
>At5g20660.1 68418.m02454 24 kDa vacuolar protein, putative similar
to 24 kDa vacuolar protein VP24 [Ipomoea batatas]
gi|5821406|dbj|BAA83809
Length = 910
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 275 RLPIFCTMMGRHT*PFS 225
RLP FCTM G+ T PF+
Sbjct: 883 RLPPFCTMFGKSTSPFT 899
>At4g21770.1 68417.m03150 pseudouridine synthase family protein
contains Pfam profile PF00849: RNA pseudouridylate
synthase
Length = 472
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +2
Query: 128 KVLSALRLT---FQQNTHSNPRKLVSKQRFTTLTLMK 229
+ L++ R+T F+ N HS PR + S +RFT L+L+K
Sbjct: 21 RTLASTRVTTPLFRSNKHS-PRFISSPKRFTCLSLLK 56
>At5g08420.1 68418.m00992 expressed protein
Length = 391
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +3
Query: 327 PEPEHP----LRAELAEEFLKDRKKFTKNAEEFTKKHSEK 434
P P+ P ++ E E F+ D+KK K +E +K SEK
Sbjct: 268 PPPQPPSKIDMQLESGEYFMSDKKKSEKKWQEKQEKQSEK 307
>At1g80240.1 68414.m09390 expressed protein contains Pfam profile
PF04862: Protein of unknown function, DUF642
Length = 370
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 91 QGLIVPDNPPYNKGAFRI-EINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPII 255
QG ++ D KG FR + F A +++F + YH D G +C P+I
Sbjct: 304 QGKVMVDYASKGKGGFRRGRLVFKAVSA--RTRVTFLSTFYHMKSDHSGSLCGPVI 357
>At3g62360.1 68416.m07005 expressed protein
Length = 1227
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 115 PPYNKGAFRIEINFPAEYPFKPPKIS 192
P Y+KG+F ++IN P + + P K++
Sbjct: 84 PVYDKGSFILKINGPDGWSWNPDKVT 109
>At1g75000.1 68414.m08707 GNS1/SUR4 membrane family protein contains
Pfam profile PF01151: GNS1/SUR4 family
Length = 281
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 425 VFFGKFFCILCKFLPIFEKFFG*FRPQWMLWFWIIHKS 312
VFF + L +FL +F FF R + + +F +I++S
Sbjct: 126 VFFWSYAFYLSRFLHLFRTFFSVIRRRKLSFFQLINQS 163
>At1g02230.1 68414.m00161 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) protein
Length = 579
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 288 QSW*QASNFLHYDGQAHLTLFINVRVVNLCFETNFRGF 175
QSW +A LH + L++ +RV ++ +T F GF
Sbjct: 399 QSWQEAQVELHSEKHGSLSIDSRIRVRDVSQDTTFSGF 436
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,419,078
Number of Sequences: 28952
Number of extensions: 278342
Number of successful extensions: 833
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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