Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0247
(658 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 150 2e-37
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 149 3e-37
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 129 4e-31
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 115 5e-27
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 94 2e-20
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 71 1e-13
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 70 3e-13
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 65 7e-12
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 28 1.0
SPAC23A1.15c |sec20||SNARE Sec20|Schizosaccharomyces pombe|chr 1... 28 1.4
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 4.2
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 26 4.2
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 26 5.5
SPBC13G1.15c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 26 5.5
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.3
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 7.3
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 7.3
SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|ch... 25 9.6
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 25 9.6
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 9.6
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 25 9.6
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 25 9.6
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 9.6
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 25 9.6
SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|... 25 9.6
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 25 9.6
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 150 bits (364), Expect = 2e-37
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +3
Query: 3 GTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKXALRR 182
GTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF+QEFKRK KKD+ N A+RR
Sbjct: 201 GTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRR 260
Query: 183 LRTACERAKRTLSSSTQASIEIDS 254
LRTACERAKRTLSSS QASIEIDS
Sbjct: 261 LRTACERAKRTLSSSAQASIEIDS 284
Score = 148 bits (358), Expect = 8e-37
Identities = 74/112 (66%), Positives = 86/112 (76%)
Frame = +2
Query: 257 FEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQ 436
FEGIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+K+DKA +++IVLVGGSTRIP+VQ
Sbjct: 286 FEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQ 345
Query: 437 KLLQDFFNGKELNKSINPDEAVAYVQLSRLLSCTVTSLRRCRICCCFDVTPL 592
KL+ DFFNGKE KSINPDEAVAY + T + + + DV PL
Sbjct: 346 KLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPL 397
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 149 bits (361), Expect = 3e-37
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +3
Query: 3 GTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKXALRR 182
GTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF QEFKRK KKD+ N A+RR
Sbjct: 201 GTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRR 260
Query: 183 LRTACERAKRTLSSSTQASIEIDS 254
LRTACERAKRTLSSS QASIEIDS
Sbjct: 261 LRTACERAKRTLSSSAQASIEIDS 284
Score = 144 bits (350), Expect = 7e-36
Identities = 71/112 (63%), Positives = 86/112 (76%)
Frame = +2
Query: 257 FEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQ 436
+EGIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+K+DK+ +++IVLVGGSTRIP++Q
Sbjct: 286 YEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQ 345
Query: 437 KLLQDFFNGKELNKSINPDEAVAYVQLSRLLSCTVTSLRRCRICCCFDVTPL 592
KL+ DFFNGKE KSINPDEAVAY + + + + DV PL
Sbjct: 346 KLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPL 397
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 129 bits (311), Expect = 4e-31
Identities = 58/84 (69%), Positives = 71/84 (84%)
Frame = +3
Query: 3 GTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKXALRR 182
GTFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +V HF+QEFKRK K D++ + ALRR
Sbjct: 205 GTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRR 264
Query: 183 LRTACERAKRTLSSSTQASIEIDS 254
LR+ACERAKR LSS TQ ++E+DS
Sbjct: 265 LRSACERAKRALSSVTQTTVEVDS 288
Score = 129 bits (311), Expect = 4e-31
Identities = 58/82 (70%), Positives = 73/82 (89%)
Frame = +2
Query: 263 GIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKL 442
GIDF +SITRARFE++NA F++T++PV K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L
Sbjct: 292 GIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRL 351
Query: 443 LQDFFNGKELNKSINPDEAVAY 508
+ DFF+G+ LNKSINPDEAVAY
Sbjct: 352 VSDFFDGRALNKSINPDEAVAY 373
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 115 bits (277), Expect = 5e-27
Identities = 53/85 (62%), Positives = 71/85 (83%)
Frame = +2
Query: 254 FFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKV 433
FF G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ + K++I DIVLVGGSTRIPKV
Sbjct: 317 FFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKV 376
Query: 434 QKLLQDFFNGKELNKSINPDEAVAY 508
Q+LL+ FF GK+ +K INPDEAVAY
Sbjct: 377 QELLESFF-GKKASKGINPDEAVAY 400
Score = 99 bits (238), Expect = 3e-22
Identities = 44/84 (52%), Positives = 63/84 (75%)
Frame = +3
Query: 3 GTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKXALRR 182
GTFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR++N+ + + RK D+ + A+ +
Sbjct: 233 GTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGK 292
Query: 183 LRTACERAKRTLSSSTQASIEIDS 254
L+ E+AKRTLSS IEI+S
Sbjct: 293 LKREVEKAKRTLSSQKSVRIEIES 316
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 93.9 bits (223), Expect = 2e-20
Identities = 45/102 (44%), Positives = 67/102 (65%)
Frame = +3
Query: 3 GTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKXALRR 182
GTFD+SIL + +G+FEV+ST GDTHLGGEDFD +V H V+ FK+ DL+ ++ A++R
Sbjct: 245 GTFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQR 304
Query: 183 LRTACERAKRTLSSSTQASIEIDSSLRVLTSTRQLLVLASRS 308
+R A E+AK LSS ++ I + T + + + SR+
Sbjct: 305 IREAAEKAKCELSSLSKTDISLPFITADATGPKHINMEISRA 346
Score = 72.9 bits (171), Expect = 4e-14
Identities = 33/74 (44%), Positives = 56/74 (75%)
Frame = +2
Query: 284 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 463
I+RA+FE+L L R T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F
Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK- 401
Query: 464 KELNKSINPDEAVA 505
+E KS+NPDEAVA
Sbjct: 402 REPAKSVNPDEAVA 415
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 71.3 bits (167), Expect = 1e-13
Identities = 31/80 (38%), Positives = 54/80 (67%)
Frame = +2
Query: 260 EGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQK 439
+GIDF ITR+ E L D+ + +EP+ K+L+ A + ++I+ I+L GG++RIP +Q
Sbjct: 323 DGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTFSEINSIILFGGASRIPFIQS 382
Query: 440 LLQDFFNGKELNKSINPDEA 499
L D+ + +++K++N DEA
Sbjct: 383 TLADYVSSDKISKNVNADEA 402
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 70.1 bits (164), Expect = 3e-13
Identities = 32/81 (39%), Positives = 49/81 (60%)
Frame = +3
Query: 9 FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKXALRRLR 188
+ VSI+ G F +KST D +LG + D ++++F EFK KYK D+ +N A RL
Sbjct: 211 YSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVLSNPKATFRLA 270
Query: 189 TACERAKRTLSSSTQASIEID 251
TA ER K+ LS++ A + ++
Sbjct: 271 TAVERLKKVLSANANAPLNVE 291
Score = 62.9 bits (146), Expect = 4e-11
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Frame = +2
Query: 266 IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 445
ID + I R+ FEEL L P+EK+L A + K ++ I +VGG TR+P V++++
Sbjct: 297 IDASSFIKRSDFEELIKPLLERLTPPIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVI 356
Query: 446 QDFFNGKELNKSINPDEAVAYVQLSRLLSCTVTS-LRRCRICCCFDVT 586
++F GK L+ ++N DEAVA LSC + S + R R DVT
Sbjct: 357 ANYF-GKGLSFTLNQDEAVA---RGCALSCAILSPVFRVREFHVHDVT 400
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 65.3 bits (152), Expect = 7e-12
Identities = 30/81 (37%), Positives = 50/81 (61%)
Frame = +3
Query: 12 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKXALRRLRT 191
+VS+++++ G+ + ++ D +LGGE + +VN F +EF++K D N +L +LR
Sbjct: 230 EVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKKNGIDPRKNARSLAKLRA 289
Query: 192 ACERAKRTLSSSTQASIEIDS 254
CE KR LS+ T AS +DS
Sbjct: 290 QCEITKRVLSNGTTASAAVDS 310
Score = 46.4 bits (105), Expect = 4e-06
Identities = 20/74 (27%), Positives = 42/74 (56%)
Frame = +2
Query: 260 EGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQK 439
+GIDF++SI R R++ + + V +++ A M+ I +++L GG++ PK+
Sbjct: 313 DGIDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFDISEVILAGGASNTPKLTS 372
Query: 440 LLQDFFNGKELNKS 481
L++ F + + +S
Sbjct: 373 LMESIFPEQTIIRS 386
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 97 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVP 2
+KSSP K VSP V SK +S V + S +P
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIP 234
>SPAC23A1.15c |sec20||SNARE Sec20|Schizosaccharomyces pombe|chr
1|||Manual
Length = 226
Score = 27.9 bits (59), Expect = 1.4
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 165 KXALRRLRTACERAKRTLSSSTQASIEIDSSLRVLTSTRQLLVLASRS*TPICSGLPW 338
K R R E A+ L S SI++DS LR + ++ + L R I SG PW
Sbjct: 25 KRHFREFRKIWETARVELEYS---SIQLDSVLRYEKAVQEYIRLNRRYRNKIASGEPW 79
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 4.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 392 RGFEPYPSWHHGETSPLAP 336
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 133 LNSWTKWLTMRLSKSSPPKWVSPAVDF 53
LN K++ SK P W+SPA DF
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 139 NTKRTSLPTRXLLGVCVLHVRGQR-GPCHRPHKRALR 246
N K+ LP + + + V G GP H+PH R LR
Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLR 45
>SPBC13G1.15c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 111
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 506 YVQLSRLLSCTVTSLRRCRICCCFDVTPLFPRY 604
Y+ + RLL +T RR CC + +F +Y
Sbjct: 33 YISIRRLLIVVITLYRRIVECCASLCSLIFSKY 65
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 7.3
Identities = 31/111 (27%), Positives = 46/111 (41%)
Frame = -2
Query: 528 SSLDSCT*ATASSGLIDLLSSFPLKKSCRSFCTLGIRVEPPTSTISWI*ALSILASRRDF 349
SS + T +T SS SSF S S + PTS+ S I + S S F
Sbjct: 297 SSSPTSTSSTISSSSSSS-SSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSF 355
Query: 348 STGSMVDLNRSAFSSSKRARVIDV*KSIPSKKNLSQCSLVWTMTRSSLPSH 196
S+ + + S+FSS+ + ++ S + S + SSL SH
Sbjct: 356 SSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSH 406
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +3
Query: 318 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 407
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 1 AVPSTCPSLPSRMVSSR*NPPPATPTW 81
++PST P++PS +S + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325
>SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 530
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 183 LRTACERAKRTLSSSTQASIEIDSSLRVLT 272
LR +CE + + S+ I IDS +R+L+
Sbjct: 390 LRFSCENSPELMGSAKYLEIYIDSPVRLLS 419
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 174 LRRLRTACERAKRTLSSSTQASIEIDSSLRVLTSTRQLLV 293
LR L C++ K+T+ S + SSL +S + LV
Sbjct: 408 LRELEFKCKQQKKTIEECKHISQSLQSSLTAESSRNKELV 447
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 6 TFDVSILTIEDGIFEVKSTAGDTHL 80
TF I DG+FE GD+HL
Sbjct: 48 TFPTEIWETRDGLFEEPVGKGDSHL 72
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 25.0 bits (52), Expect = 9.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 198 ERAKRTLSSSTQASIEIDSSLRVLTSTRQLLVLASRS 308
E +K+ +SST A + S V+TS+ + ASRS
Sbjct: 807 EFSKKDTASSTGADTPLSRSQSVITSSTDVTSSASRS 843
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 249 LSQCSLVWTMTRSSLPSHMQYANA 178
+S C ++WTM+ P HM A
Sbjct: 265 MSFCGVIWTMSGYDAPFHMSEETA 288
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.0 bits (52), Expect = 9.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 105 MVNHFVQEFKRKYKKDLATNKXALRRLRTACERAKRTLSSSTQASI 242
+++ F EFK++ K D + L+ L + C R R SS SI
Sbjct: 711 ILSSFSNEFKKRLKSDGTSIAHWLQGLASFCGRVFRRYSSLDCTSI 756
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.0 bits (52), Expect = 9.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +2
Query: 245 DRFFFE-----GIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 409
DRF F+ G+D+YT I E +A +S+ E +K D + D++ D + VG
Sbjct: 324 DRFSFDMSLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVG 380
>SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 521
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 523 PGQLHISYGLVRVNRFVELLSIKEI 449
PG L I+Y + +N +V L+S+ E+
Sbjct: 77 PGSLFIAYLMTGINLYVVLISLGEM 101
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +3
Query: 108 VNHFVQEFKRKYKKDLATNKXALRRLRTACERAKRTLSSSTQASIEIDS 254
V+HF+++ +RKY L + + +L++ ++ K S + I+ D+
Sbjct: 1872 VDHFIRKHERKYFNGLRKQEIDV-KLKSRSDKEKSCTVSESYKQIDCDT 1919
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,966,392
Number of Sequences: 5004
Number of extensions: 62245
Number of successful extensions: 247
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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