Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0246
(667 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces... 82 6e-17
SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger protein|Schiz... 51 1e-07
SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit Air1|Schi... 47 3e-06
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 44 2e-05
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 30 0.26
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 28 1.1
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 27 1.8
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 27 1.8
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 26 4.2
SPBC15D4.02 |||transcription factor, zf-fungal binuclear cluster... 26 5.6
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 26 5.6
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 25 7.4
SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr 2|... 25 7.4
SPAC17G8.11c |||mannosyltransferase complex subunit |Schizosacch... 25 9.8
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 9.8
>SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 179
Score = 82.2 bits (194), Expect = 6e-17
Identities = 32/74 (43%), Positives = 41/74 (55%)
Frame = +1
Query: 256 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQT 435
GH AR+C + CY CN TGH A EC + E +CY C GH+ R+CP
Sbjct: 26 GHQARECTK-GSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAE 84
Query: 436 CYNCNKSGHISRNC 477
CY C + GHI+R+C
Sbjct: 85 CYKCGRVGHIARDC 98
Score = 76.6 bits (180), Expect = 3e-15
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Frame = +1
Query: 256 GHFARDCKE--EADRCYRCNGTGHIARECAQSPDE---PSCYNCNKTGHIARNCPEGGRE 420
GH A +C E + CY C GH+ R+C SP+ CY C + GHIAR+C G++
Sbjct: 45 GHKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQ 104
Query: 421 S--------ATQTCYNCNKSGHISRNCPDGTKTCYVC 507
S + CY C GH +R+C G K CY C
Sbjct: 105 SGGRFGGHRSNMNCYACGSYGHQARDCTMGVK-CYSC 140
Score = 72.1 bits (169), Expect = 7e-14
Identities = 34/77 (44%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +1
Query: 292 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISR 471
RCY C GH AREC + CYNCN+TGH A C E +E +TCY C +GH+ R
Sbjct: 18 RCYNCGENGHQARECTKGS---ICYNCNQTGHKASECTEPQQE---KTCYACGTAGHLVR 71
Query: 472 NCPDGTK-----TCYVC 507
+CP CY C
Sbjct: 72 DCPSSPNPRQGAECYKC 88
Score = 60.9 bits (141), Expect = 2e-10
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Frame = +1
Query: 256 GHFARDCKEEADR-------------CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIAR 396
GH ARDC+ + CY C GH AR+C CY+C K GH +
Sbjct: 92 GHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGV---KCYSCGKIGHRSF 148
Query: 397 NCPEGGRESATQTCYNCNKSGHISRNC 477
C + S Q CY CN+ GHI+ NC
Sbjct: 149 ECQQA---SDGQLCYKCNQPGHIAVNC 172
Score = 58.8 bits (136), Expect = 7e-10
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 355 PSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC--PDGTKTCYVC 507
P CYNC + GH AR C +G CYNCN++GH + C P KTCY C
Sbjct: 17 PRCYNCGENGHQARECTKG------SICYNCNQTGHKASECTEPQQEKTCYAC 63
Score = 40.3 bits (90), Expect = 2e-04
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 110 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDS-GFNRQREKCFKC 247
S P + CYKC R GH AR+C G S G +R C+ C
Sbjct: 75 SSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYAC 121
Score = 36.3 bits (80), Expect = 0.004
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 15/55 (27%)
Frame = +2
Query: 134 SVCYKCNRTGHFARECTQ------------GGVVSRD---SGFNRQREKCFKCNR 253
S+CY CN+TGH A ECT+ G + RD S RQ +C+KC R
Sbjct: 36 SICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGR 90
Score = 35.1 bits (77), Expect = 0.009
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 140 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRKDT 262
CY C GH ARECT+G + + + +C + ++ T
Sbjct: 19 CYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQEKT 59
Score = 31.9 bits (69), Expect = 0.085
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 122 AMSSSVCYKCNRTGHFARECT 184
A +CYKCN+ GH A CT
Sbjct: 153 ASDGQLCYKCNQPGHIAVNCT 173
Score = 30.7 bits (66), Expect = 0.20
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 10/52 (19%)
Frame = +2
Query: 128 SSSVCYKCNRTGHFARECTQG------GVVSRDSGFNRQR----EKCFKCNR 253
S+ CY C GH AR+CT G G + S F Q+ + C+KCN+
Sbjct: 114 SNMNCYACGSYGHQARDCTMGVKCYSCGKIGHRS-FECQQASDGQLCYKCNQ 164
>SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 218
Score = 51.2 bits (117), Expect = 1e-07
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 295 CYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISR 471
C+ C GHI ++C ++ D S C+ C H C + G + C+ C+++GH+S
Sbjct: 79 CFACRQQGHIVQDCPEAKDNVSICFRCGSKEHSLNACSKKGPLKFAK-CFICHENGHLSG 137
Query: 472 NCPDGTKTCY 501
C K Y
Sbjct: 138 QCEQNPKGLY 147
Score = 47.6 bits (108), Expect = 2e-06
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Frame = +1
Query: 253 QGHFARDCKEEADR---CYRCNGTGHIARECA-QSPDE-PSCYNCNKTGHIARNCPEG-- 411
QGH +DC E D C+RC H C+ + P + C+ C++ GH++ C +
Sbjct: 85 QGHIVQDCPEAKDNVSICFRCGSKEHSLNACSKKGPLKFAKCFICHENGHLSGQCEQNPK 144
Query: 412 GRESATQTCYNCNKSGHISRNCPDGTK 492
G C C+ H++++C K
Sbjct: 145 GLYPKGGCCKFCSSVHHLAKDCDQVNK 171
Score = 36.3 bits (80), Expect = 0.004
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +1
Query: 328 RECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC----PDGTKT 495
R Q + C+ C + GHI ++CPE + C+ C H C P
Sbjct: 68 RRINQRNRDKFCFACRQQGHIVQDCPEA--KDNVSICFRCGSKEHSLNACSKKGPLKFAK 125
Query: 496 CYVC 507
C++C
Sbjct: 126 CFIC 129
Score = 33.9 bits (74), Expect = 0.021
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +1
Query: 292 RCYRCNGTGHIARECAQSPD--EPS---CYNCNKTGHIARNCPEGGRESAT 429
+C+ C+ GH++ +C Q+P P C C+ H+A++C + ++ +
Sbjct: 125 KCFICHENGHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDCDQVNKDDVS 175
>SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit
Air1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 16/92 (17%)
Frame = +1
Query: 253 QGHFARDCKEEADRCYRCNGTGHIAREC----------------AQSPDEPSCYNCNKTG 384
+G + E+ C+ C G GHI+++C + P C NC G
Sbjct: 75 RGRYFGSDPSESIVCHNCKGNGHISKDCPHVLCTTCGAIDDHISVRCPWTKKCMNCGLLG 134
Query: 385 HIARNCPEGGRESATQTCYNCNKSGHISRNCP 480
HIA C E R+ + C C+ H S CP
Sbjct: 135 HIAARCSE-PRKRGPRVCRTCHTDTHTSSTCP 165
Score = 35.9 bits (79), Expect = 0.005
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 17/66 (25%)
Frame = +1
Query: 361 CYNCNKTGHIARNCPE-------------GGRESATQTCYNCNKSGHISRNCPD----GT 489
C+NC GHI+++CP R T+ C NC GHI+ C + G
Sbjct: 89 CHNCKGNGHISKDCPHVLCTTCGAIDDHISVRCPWTKKCMNCGLLGHIAARCSEPRKRGP 148
Query: 490 KTCYVC 507
+ C C
Sbjct: 149 RVCRTC 154
Score = 25.0 bits (52), Expect = 9.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 131 SSVCYKCNRTGHFAREC 181
S VC+ C GH +++C
Sbjct: 86 SIVCHNCKGNGHISKDC 102
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 44.0 bits (99), Expect = 2e-05
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 361 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 480
C NC GH +CPE + C +C GHI+R+CP
Sbjct: 311 CQNCGNVGHRRFDCPERINHTMNIVCRHCGSIGHIARDCP 350
Score = 29.9 bits (64), Expect = 0.34
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Frame = +1
Query: 256 GHFARDCKEEADR-----CYRCNGTGHIARECAQSPDEP 357
GH DC E + C C GHIAR+C +P
Sbjct: 318 GHRRFDCPERINHTMNIVCRHCGSIGHIARDCPVRDQQP 356
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 415 RESATQTCYNCNKSGHISRNCPD 483
R+ Q C NC GH +CP+
Sbjct: 304 RDDENQVCQNCGNVGHRRFDCPE 326
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 30.3 bits (65), Expect = 0.26
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +1
Query: 397 NCPEGGRESATQTCYN----CNKSGHISRNCPDGTKTCYVC 507
+CP+G E T C+N C +G+IS P VC
Sbjct: 66 DCPDGSDEPGTSACHNGKFFCKNTGYISSYIPSNRVDDTVC 106
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +1
Query: 412 GRESATQTCYNCNKSGHISRN--CP 480
GR+ T+ C NC + GH+ N CP
Sbjct: 939 GRKPTTRKCSNCGQVGHMKTNKICP 963
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +1
Query: 340 QSPDEPSCYNCNKTGHIARN--CPEGGR 417
+ P C NC + GH+ N CP GR
Sbjct: 940 RKPTTRKCSNCGQVGHMKTNKICPLFGR 967
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +1
Query: 253 QGHFARDCKEEADRCYRCNGTGHIAREC 336
+ H + C CY+C H REC
Sbjct: 1792 RAHTGKACPVRLSTCYKCGKADHNLREC 1819
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 134 SVCYKCNRTGHFAREC 181
S CYKC + H REC
Sbjct: 1804 STCYKCGKADHNLREC 1819
Score = 25.0 bits (52), Expect = 9.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 433 TCYNCNKSGHISRNC 477
TCY C K+ H R C
Sbjct: 1805 TCYKCGKADHNLREC 1819
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +1
Query: 253 QGHFARDCKEEADRCYRCNGTGHIAREC 336
+ H + C CY+C H REC
Sbjct: 1792 RAHTGKACPVRLSTCYKCGKADHNLREC 1819
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 134 SVCYKCNRTGHFAREC 181
S CYKC + H REC
Sbjct: 1804 STCYKCGKADHNLREC 1819
Score = 25.0 bits (52), Expect = 9.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 433 TCYNCNKSGHISRNC 477
TCY C K+ H R C
Sbjct: 1805 TCYKCGKADHNLREC 1819
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Frame = +1
Query: 328 RECAQSPDEPS-----CYNCNKTGHIARNCP 405
R A PD+P CY C + GH + CP
Sbjct: 169 RIAASVPDKPPPPGYICYRCGQKGHWIQACP 199
Score = 25.4 bits (53), Expect = 7.4
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +2
Query: 137 VCYKCNRTGHFAREC 181
+CY+C + GH+ + C
Sbjct: 184 ICYRCGQKGHWIQAC 198
>SPBC15D4.02 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 25.8 bits (54), Expect = 5.6
Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 3/107 (2%)
Frame = -1
Query: 436 RSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQC---RYICSNGQPLPCNPS 266
++ S AP +V+ G + + + R RT+ C C R C +P+ N
Sbjct: 8 KTGSNNSAPVTGKTVQSGNALNNSGLVKRQARKRTKTGCLTCRKRRIKCDERKPICYNCI 67
Query: 265 QSXXXXXXXXXXXLPIETGIPRHHAPLRAFAREMPGPVALVANA*TH 125
+S P T P+ + E P P L A TH
Sbjct: 68 KSKRQCEGYTHFPRPSGTFTASRRIPVSSLLSE-PAPHGL-AGQPTH 112
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -1
Query: 496 TSWC-RRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALC 320
+S C ++DS +CCS + + + P S CCS T+ +
Sbjct: 223 SSCCSKKDSSPSEKPSCCSQEKKSCCSSKKPSCCSQE-KKGCCSTEKTSCCSQEKKSCCT 281
Query: 319 AQCRYICSNGQPLPC 275
++ CSNG+ C
Sbjct: 282 SEKPSCCSNGKSTVC 296
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 25.4 bits (53), Expect = 7.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 409 GGRESATQTCYNCNKSG 459
GG+E + ++C +CN SG
Sbjct: 144 GGKEGSVKSCASCNGSG 160
>SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 461
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 445 SYSRSASQTPAPPRDSSVRCGPSCCSCN 362
+YS + T APP SS G SC +CN
Sbjct: 417 TYSPTTLSTNAPPSPSS---GRSCSNCN 441
>SPAC17G8.11c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 646 IVCRAWRPLLIVRAWHH 596
I+ AWR L AWHH
Sbjct: 213 IIWSAWRKLPDAEAWHH 229
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 434 VCVADSRPPSGQFRAMWP 381
V ++D RPP + RA WP
Sbjct: 302 VSISDYRPPKKRKRAAWP 319
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,373,426
Number of Sequences: 5004
Number of extensions: 42954
Number of successful extensions: 184
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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