Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0246
(667 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 70 1e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 58 4e-09
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 58 4e-09
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 58 4e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 58 6e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 58 6e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 55 4e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 55 4e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 55 4e-08
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 39 0.004
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 39 0.004
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 39 0.004
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 38 0.006
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 38 0.006
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.008
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.008
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.011
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 36 0.034
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 36 0.034
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 36 0.034
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 36 0.034
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 35 0.045
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 35 0.045
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 35 0.060
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 33 0.24
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 32 0.42
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 32 0.42
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 32 0.42
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.42
Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical pr... 31 0.73
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 30 1.3
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 30 1.3
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 1.7
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 2.2
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 2.2
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 29 2.2
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 3.9
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 3.9
AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical ... 29 3.9
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 5.2
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 5.2
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 28 5.2
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 28 5.2
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 28 5.2
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 5.2
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 28 5.2
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 5.2
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 5.2
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 28 6.8
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 27 9.1
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 30/111 (27%)
Frame = +1
Query: 247 QPQGHFARDCKEEAD------------RCYRCNGTGHIARECAQSPDE------------ 354
Q GHF+RDC + CY C G GH +R+C + E
Sbjct: 41 QETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGE 100
Query: 355 ------PSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGT 489
CYNC ++GHI+R C E G + + CY C ++GHISR+CP T
Sbjct: 101 GRSFGGQKCYNCGRSGHISRECTESG-SAEEKRCYQCQETGHISRDCPSQT 150
Score = 68.5 bits (160), Expect = 4e-12
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 17/82 (20%)
Frame = +1
Query: 286 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATQ- 432
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 433 ------TCYNCNKSGHISRNCP 480
+CYNC GH SR+CP
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCP 83
Score = 65.3 bits (152), Expect = 4e-11
Identities = 45/127 (35%), Positives = 55/127 (43%), Gaps = 40/127 (31%)
Frame = +1
Query: 247 QPQGHFARDCKE-EAD----------RCYRCNGTGHIARECAQSPDEP----------SC 363
Q GH +R+C E+D CY C TGH +R+C + SC
Sbjct: 10 QQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSC 69
Query: 364 YNCNKTGHIARNCP----EGG-----------RESATQTCYNCNKSGHISRNCPDG---- 486
YNC GH +R+CP EGG R Q CYNC +SGHISR C +
Sbjct: 70 YNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTESGSAE 129
Query: 487 TKTCYVC 507
K CY C
Sbjct: 130 EKRCYQC 136
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 134 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 247
S CY C TGHF+R+C +GG G C+ C
Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNC 72
Score = 37.1 bits (82), Expect = 0.011
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 430 QTCYNCNKSGHISRNCPDG 486
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 36.3 bits (80), Expect = 0.020
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 140 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 247
CY C R+GH +RECT+ G + + ++C++C
Sbjct: 109 CYNCGRSGHISRECTESG--------SAEEKRCYQC 136
Score = 31.9 bits (69), Expect = 0.42
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 125 MSSSVCYKCNRTGHFARECTQG 190
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 8/46 (17%)
Frame = +2
Query: 140 CYKCNRTGHFARECT-------QGGVVSR-DSGFNRQREKCFKCNR 253
CY C GH++R+C GG R G + +KC+ C R
Sbjct: 69 CYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGR 114
Score = 29.1 bits (62), Expect = 3.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 140 CYKCNRTGHFAREC 181
CY+C TGH +R+C
Sbjct: 133 CYQCQETGHISRDC 146
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 358 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 358 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Frame = +1
Query: 247 QPQGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 390
Q GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 391 ARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVC 507
EG E C+NC GH S CP+ + C+ C
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 478
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 256 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRESA 426
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 246 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPRE 305
Query: 427 TQTCYNCNKSG 459
+ + SG
Sbjct: 306 GRNGFTGGSSG 316
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 256 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 408
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 360 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 361 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +1
Query: 415 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 507
R C+NC + GH S +CP+ K CY C
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNC 287
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +1
Query: 415 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 507
R C+NC + GH S +CP+ K CY C
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNC 401
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 253 QGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 357
+GH + +C E C+ C GH + EC +P +P
Sbjct: 461 EGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
Score = 27.5 bits (58), Expect = 9.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 137 VCYKCNRTGHFARECTQ 187
VCY C + GH +R+C +
Sbjct: 283 VCYNCQQPGHNSRDCPE 299
Score = 27.5 bits (58), Expect = 9.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 137 VCYKCNRTGHFARECTQ 187
VCY C + GH +R+C +
Sbjct: 397 VCYNCQQPGHNSRDCPE 413
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 358 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 358 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Frame = +1
Query: 247 QPQGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 390
Q GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 391 ARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVC 507
EG E C+NC GH S CP+ + C+ C
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 478
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 256 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRESA 426
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 246 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPRE 305
Query: 427 TQTCYNCNKSG 459
+ + SG
Sbjct: 306 GRNGFTGGSSG 316
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 256 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 408
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 360 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 361 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +1
Query: 415 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 507
R C+NC + GH S +CP+ K CY C
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNC 287
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +1
Query: 415 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 507
R C+NC + GH S +CP+ K CY C
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNC 401
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 253 QGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 357
+GH + +C E C+ C GH + EC +P +P
Sbjct: 461 EGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
Score = 27.5 bits (58), Expect = 9.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 137 VCYKCNRTGHFARECTQ 187
VCY C + GH +R+C +
Sbjct: 283 VCYNCQQPGHNSRDCPE 299
Score = 27.5 bits (58), Expect = 9.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 137 VCYKCNRTGHFARECTQ 187
VCY C + GH +R+C +
Sbjct: 397 VCYNCQQPGHNSRDCPE 413
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 358 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 358 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Frame = +1
Query: 247 QPQGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 390
Q GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 391 ARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVC 507
EG E C+NC GH S CP+ + C+ C
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 478
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 256 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRESA 426
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 246 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPRE 305
Query: 427 TQTCYNCNKSG 459
+ + SG
Sbjct: 306 GRNGFTGGSSG 316
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 256 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 408
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 360 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 361 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +1
Query: 415 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 507
R C+NC + GH S +CP+ K CY C
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNC 287
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +1
Query: 415 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 507
R C+NC + GH S +CP+ K CY C
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNC 401
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 253 QGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 357
+GH + +C E C+ C GH + EC +P +P
Sbjct: 461 EGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
Score = 27.5 bits (58), Expect = 9.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 137 VCYKCNRTGHFARECTQ 187
VCY C + GH +R+C +
Sbjct: 283 VCYNCQQPGHNSRDCPE 299
Score = 27.5 bits (58), Expect = 9.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 137 VCYKCNRTGHFARECTQ 187
VCY C + GH +R+C +
Sbjct: 397 VCYNCQQPGHNSRDCPE 413
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 58.0 bits (134), Expect = 6e-09
Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +1
Query: 256 GHFARDCKEEA---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP-EGGR 417
GHFA DC + C C GH A +C Q P P C NC + GH A++C E R
Sbjct: 602 GHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVR 660
Query: 418 ESATQTCYNCNKSGHISRNCPDGTK 492
T+ C C + GH CP K
Sbjct: 661 MEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 271 DCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYN 444
D E C+ C GHI++EC P P C NC + GH A +C + C N
Sbjct: 564 DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PRVPRGPCRN 620
Query: 445 CNKSGHISRNC 477
C GH + +C
Sbjct: 621 CGIEGHFAVDC 631
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Frame = +1
Query: 253 QGHFARDCKEEADR------CYRCNGTGHIARECAQSPDE 354
+GHFA+DC+ E R C RC GH EC P +
Sbjct: 647 EGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 58.0 bits (134), Expect = 6e-09
Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +1
Query: 256 GHFARDCKEEA---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP-EGGR 417
GHFA DC + C C GH A +C Q P P C NC + GH A++C E R
Sbjct: 602 GHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVR 660
Query: 418 ESATQTCYNCNKSGHISRNCPDGTK 492
T+ C C + GH CP K
Sbjct: 661 MEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 271 DCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYN 444
D E C+ C GHI++EC P P C NC + GH A +C + C N
Sbjct: 564 DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PRVPRGPCRN 620
Query: 445 CNKSGHISRNC 477
C GH + +C
Sbjct: 621 CGIEGHFAVDC 631
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Frame = +1
Query: 253 QGHFARDCKEEADR------CYRCNGTGHIARECAQSPDE 354
+GHFA+DC+ E R C RC GH EC P +
Sbjct: 647 EGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 55.2 bits (127), Expect = 4e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 358 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 17/104 (16%)
Frame = +1
Query: 247 QPQGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCP 405
Q GH + DC KE R CY C GH +REC + P E N
Sbjct: 164 QQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGG 223
Query: 406 E----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVC 507
GG E C+NC GH S CP+ + C+ C
Sbjct: 224 NDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 267
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 361 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 280 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 408
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 187 GGRGVAGFRFQSAT*EVLQVQPQGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 357
GG G G + + + +GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = +1
Query: 409 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 507
GG E C+NC + GH S +CP+ K CY C
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNC 188
Score = 31.5 bits (68), Expect = 0.56
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 137 VCYKCNRTGHFARECTQ 187
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 55.2 bits (127), Expect = 4e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 358 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 17/104 (16%)
Frame = +1
Query: 247 QPQGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCP 405
Q GH + DC KE R CY C GH +REC + P E N
Sbjct: 164 QQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGG 223
Query: 406 E----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVC 507
GG E C+NC GH S CP+ + C+ C
Sbjct: 224 NDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 267
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 361 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 280 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 408
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 187 GGRGVAGFRFQSAT*EVLQVQPQGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 357
GG G G + + + +GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = +1
Query: 409 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 507
GG E C+NC + GH S +CP+ K CY C
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNC 188
Score = 31.5 bits (68), Expect = 0.56
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 137 VCYKCNRTGHFARECTQ 187
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 55.2 bits (127), Expect = 4e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 358 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 17/104 (16%)
Frame = +1
Query: 247 QPQGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCP 405
Q GH + DC KE R CY C GH +REC + P E N
Sbjct: 164 QQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGG 223
Query: 406 E----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVC 507
GG E C+NC GH S CP+ + C+ C
Sbjct: 224 NDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 267
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 361 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 280 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 408
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 187 GGRGVAGFRFQSAT*EVLQVQPQGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 357
GG G G + + + +GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = +1
Query: 409 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 507
GG E C+NC + GH S +CP+ K CY C
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNC 188
Score = 31.5 bits (68), Expect = 0.56
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 137 VCYKCNRTGHFARECTQ 187
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 RDCKEEADRCYRCNGTGHIARECAQ---SPDEPSCYNCNKTGHIARNCPEGGRESATQ-T 435
+D K C+ C GH +C + S + C+ C H C + G + T
Sbjct: 222 QDQKITGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYAT 281
Query: 436 CYNCNKSGHISRNCPDGTKTCY 501
C+ C + GHISR+C Y
Sbjct: 282 CFVCKQVGHISRDCHQNVNGVY 303
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = +1
Query: 358 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC-PDGTK-----TCYVC 507
+C++C + GH +CP+ S+ C+ C H C G K TC+VC
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVC 285
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +1
Query: 286 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 456
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 457 GHISRNCP 480
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 286 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 408
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 653 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 692
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 259 HFARDCKEEADRCYRCNGTGHIARECAQSPDEPS 360
H A K + C+RCN GHIA C + + S
Sbjct: 665 HMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 698
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +1
Query: 286 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 456
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 457 GHISRNCP 480
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 286 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 408
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 556 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 595
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 259 HFARDCKEEADRCYRCNGTGHIARECAQSPDEPS 360
H A K + C+RCN GHIA C + + S
Sbjct: 568 HMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 601
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +1
Query: 286 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 456
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 457 GHISRNCP 480
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 286 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 408
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 567 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 606
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 259 HFARDCKEEADRCYRCNGTGHIARECAQSPDEPS 360
H A K + C+RCN GHIA C + + S
Sbjct: 579 HMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 612
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 37.9 bits (84), Expect = 0.006
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Frame = +1
Query: 148 VQPDRAFRARMHAGGRGVAGFRFQSAT*EVLQVQPQGHFARDCK-EEADRCYRCNGTGHI 324
V + FR R GG G+ GF F + D EEA R N + ++
Sbjct: 129 VDVNEIFR-RAFGGGGGMGGFNFDNFAQSAFGHSAAQEMVMDISFEEAVRGATKNVSVNV 187
Query: 325 ARECAQ---SPDEP-----SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 474
+C + + EP SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 188 VEDCLKCHGTQVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 37.9 bits (84), Expect = 0.006
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Frame = +1
Query: 148 VQPDRAFRARMHAGGRGVAGFRFQSAT*EVLQVQPQGHFARDCK-EEADRCYRCNGTGHI 324
V + FR R GG G+ GF F + D EEA R N + ++
Sbjct: 129 VDVNEIFR-RAFGGGGGMGGFNFDNFAQSAFGHSAAQEMVMDISFEEAVRGATKNVSVNV 187
Query: 325 ARECAQ---SPDEP-----SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 474
+C + + EP SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 188 VEDCLKCHGTQVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 361 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 477
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.026
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 256 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 411
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 361 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 477
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.026
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 256 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 411
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 37.1 bits (82), Expect = 0.011
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 430 QTCYNCNKSGHISRNCPDG 486
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.034
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 358 SCYNCNKTGHIARNCPEG 411
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.42
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 125 MSSSVCYKCNRTGHFARECTQG 190
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +1
Query: 286 ADR-CYRCNGTGHIAREC 336
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +1
Query: 265 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 444
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 445 CNKSGHISRNCPDG 486
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 31.9 bits (69), Expect = 0.42
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 125 MSSSVCYKCNRTGHFARECTQGGV 196
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = +1
Query: 253 QGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARNCPEGGR 417
+GH A C + R N H + + PD+ + CY C + GH A C +G
Sbjct: 212 RGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANRCHKGAL 270
Query: 418 ESATQTCY 441
+ T +
Sbjct: 271 AFLSNTAH 278
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 35.5 bits (78), Expect = 0.034
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = -1
Query: 493 SWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCG-PSCCSCNMTARPGSVRTRALCA 317
S C S G CG+TCC APP S CG P C C V T C
Sbjct: 64 SGCGCGSMGMCGQTCC--------PSAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCK 112
Query: 316 QCRYICSN 293
C+ +C+N
Sbjct: 113 CCQPVCTN 120
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 35.5 bits (78), Expect = 0.034
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 292 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 420
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 361 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 483
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 113 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.034
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 292 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 420
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 361 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 483
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.034
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 292 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 420
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 361 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 483
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.034
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 292 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 420
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 361 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 483
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.034
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +1
Query: 295 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 459
CY+C GH++++C QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 32.3 bits (70), Expect = 0.32
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 355 PSCYNCNKTGHIARNCPEGGRES 423
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 3.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 436 CYNCNKSGHISRNCPDGT 489
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 140 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 232
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 358 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +1
Query: 286 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 441
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 427 TQTCYNCNKSGHISRNCPDGTKTCYVC 507
+ TC+NC K GH + C + C C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANC 227
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 256 GHFARDCKEEADRCYRCNGTGHIARECA 339
GH A +C C C H A ECA
Sbjct: 211 GHRATECSAPQRECANCGDPNHRANECA 238
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 358 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 492
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +1
Query: 286 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 441
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 427 TQTCYNCNKSGHISRNCPDGTKTCYVC 507
+ TC+NC K GH + C + C C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANC 227
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 256 GHFARDCKEEADRCYRCNGTGHIARECA 339
GH A +C C C H A ECA
Sbjct: 211 GHRATECSAPQRECANCGDPNHRANECA 238
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 34.7 bits (76), Expect = 0.060
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = -1
Query: 484 RRDSCGRCGRTCCSYSRSASQ-TPAPPRDSSVRC-GPSC---CS--CNMTARPGSVRTRA 326
RR CGR +CCS S S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 325 LCAQCRYICSNGQPLP 278
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 32.7 bits (71), Expect = 0.24
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = -1
Query: 475 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNMTA---RPGSVRTRALC-AQ 314
S +C TC S S+ TP P + V+C PSC +C + P +V+ C Q
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQ 158
Query: 313 CRYICSNGQPL-PCNP 269
C+ C QP+ C P
Sbjct: 159 CQQQCVQTQPIQQCQP 174
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 322 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 486
+ R+C Q +P + C+ C++ GH +CP+ + + N + R+ G
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSG 1398
Score = 27.9 bits (59), Expect = 6.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 140 CYKCNRTGHFARECTQ 187
C++C+R GHF C Q
Sbjct: 1357 CHQCHRIGHFVESCPQ 1372
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.42
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Frame = -1
Query: 475 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNMTA---RPGSVRTRALC-AQ 314
S +C TC S S+ TP P + V+C PSC +C + P V+ C Q
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAPVQCVPQCQQQ 158
Query: 313 CRYICSNGQPL-PCNP 269
C+ C QP+ C P
Sbjct: 159 CQQQCVQTQPIQQCQP 174
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 31.9 bits (69), Expect = 0.42
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -1
Query: 508 RTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 365
R R CR C C RTCC + T P CG CC C
Sbjct: 72 RPRCCCCCRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 116
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 31.9 bits (69), Expect = 0.42
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -1
Query: 508 RTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 365
R R CR C C RTCC + T P CG CC C
Sbjct: 75 RPRCCCCCRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 119
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.9 bits (69), Expect = 0.42
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Frame = +1
Query: 241 QVQPQGHFARDCKEEADRCY--RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP--- 405
QV P+G F CKE+ RC CN + + C PSC +G NC
Sbjct: 1414 QVCPEGRFGAGCKEKC-RCANGHCNASSGECK-CNLGFTGPSCEQSCPSGKYGLNCTLDC 1471
Query: 406 ---EGGRESATQTCYNCNKSGHISR---NCPDG 486
R Q C +C + SR +CP+G
Sbjct: 1472 ECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNG 1504
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.9 bits (69), Expect = 0.42
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Frame = +1
Query: 241 QVQPQGHFARDCKEEADRCY--RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP--- 405
QV P+G F CKE+ RC CN + + C PSC +G NC
Sbjct: 1414 QVCPEGRFGAGCKEKC-RCANGHCNASSGECK-CNLGFTGPSCEQSCPSGKYGLNCTLDC 1471
Query: 406 ---EGGRESATQTCYNCNKSGHISR---NCPDG 486
R Q C +C + SR +CP+G
Sbjct: 1472 ECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNG 1504
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +1
Query: 346 PDEPSCYNCNKTGHIARNC---PEGG-RESATQTCYNCNKSGHISRNCP 480
P+ C C + G +C P+ RE C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +1
Query: 295 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 408
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical
protein K08E4.3 protein.
Length = 352
Score = 31.1 bits (67), Expect = 0.73
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 520 WPGLRTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRC 386
W G T +CR D+ G+CG CS + + + RC
Sbjct: 274 WMGANTAHNIYCRYDNVGKCGTIDCSINHFTLKAQNSSEITGDRC 318
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 31.1 bits (67), Expect = 0.73
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Frame = -1
Query: 571 RQGGCG*FRASSXSREMWPGLRTRSTSWCRRDSCGRCGRTCCSYSRSASQTPA----PPR 404
RQGGCG G C R C C R CC+ R+ T P
Sbjct: 59 RQGGCGCCGCGCGCCGCGGGGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPC 118
Query: 403 DSSVRCGPSCCSC 365
CG CC C
Sbjct: 119 CCGCGCGCGCCGC 131
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +1
Query: 274 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 450
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 451 KSGHISRNCPDGTKTC 498
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +1
Query: 274 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 450
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 451 KSGHISRNCPDGTKTC 498
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -1
Query: 508 RTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 365
R R CR C C RTCC +R + CG CC C
Sbjct: 70 RPRCCCCCRPKCCCTCCRTCCC-TRCCTCCRPCCCGCGCGCGCGCCGC 116
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = -1
Query: 508 RTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 365
R R CRR C C RTCC + T P CG CC C
Sbjct: 88 RPRCCCCCRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 130
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = -1
Query: 508 RTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 365
R R CRR C C RTCC + T P CG CC C
Sbjct: 89 RPRCCCCCRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 131
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -1
Query: 466 RCGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALC-AQCRYICSN 293
RC TC + + P P PR S+ C PSC P V+ +LC QCR +C+N
Sbjct: 240 RCLPTCIQQIQISVPLPPPAPRCDSM-CMPSC-------SPSCVQQYSLCPQQCRPMCTN 291
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +2
Query: 140 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 247
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 436 CYNCNKSGHISRNCPDGTKTCYVC 507
C NCNK+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 436 CYNCNKSGHISRNCP 480
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 5.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 361 CYNCNKTGHIARNCPE 408
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 193 RGVAGFRF-QSAT*EVLQVQPQGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYN 369
+ +AG + QS + QP E + C C+GT + + D SC++
Sbjct: 222 KSLAGLSYHQSYLHDQKSSQPLVKLLSPSIEISTSCDFCSGTAFMNKNTKLPEDLVSCHD 281
Query: 370 CNKTGH 387
C ++GH
Sbjct: 282 CGRSGH 287
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +1
Query: 265 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 408
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 436 CYNCNKSGHISRNCPDGTKTCYVC 507
C NCNK+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = -1
Query: 463 CGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ-CRYICSNG 290
C +TC + S +Q AP P C P+C + P +V+ C Q C C
Sbjct: 107 CQQTCQT-SSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQCVPQCQQKCTQQCVQA 165
Query: 289 QPL-PCNP 269
QP+ C P
Sbjct: 166 QPIQQCQP 173
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = -1
Query: 463 CGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ-CRYICSNG 290
C +TC + S +Q AP P C P+C + P +V+ C Q C C
Sbjct: 108 CQQTCQT-SSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQCVPQCQQKCTQQCVQA 166
Query: 289 QPL-PCNP 269
QP+ C P
Sbjct: 167 QPIQQCQP 174
>AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical
protein Y46H3D.8 protein.
Length = 247
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -1
Query: 514 GLRTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCS--CNMTARPGS 341
GL+ ++C++ +C RC + + S S+S + DSS C + C T +
Sbjct: 176 GLQDFVNTYCQK-TCSRCASSTTTASSSSSSCTSYTADSSSACASWAANGFCTNTFYTAA 234
Query: 340 VRTRALCAQCRYIC 299
R ++ CA +C
Sbjct: 235 TR-KSYCATTCKLC 247
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 412 GRESATQTCYNCNKSGHISRNCP 480
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 412 GRESATQTCYNCNKSGHISRNCP 480
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +1
Query: 280 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 447
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 448 NKSGHISRNCPDGTKTC 498
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
Score = 27.9 bits (59), Expect = 6.8
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 15/100 (15%)
Frame = +1
Query: 253 QGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE--- 408
+GH+ C C T + A+ C S +E CN K G+ C
Sbjct: 1863 EGHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCAS 1921
Query: 409 ---GGRESATQTCYNCNKSGHI----SRNCPDGTKTCYVC 507
G + + ++C C +G+ SR+C + CY+C
Sbjct: 1922 GFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +1
Query: 280 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 447
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 448 NKSGHISRNCPDGTKTC 498
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
Score = 27.9 bits (59), Expect = 6.8
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 15/100 (15%)
Frame = +1
Query: 253 QGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE--- 408
+GH+ C C T + A+ C S +E CN K G+ C
Sbjct: 1863 EGHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCAS 1921
Query: 409 ---GGRESATQTCYNCNKSGHI----SRNCPDGTKTCYVC 507
G + + ++C C +G+ SR+C + CY+C
Sbjct: 1922 GFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 444
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 445 CNKSGHISRNCPDGTKTCYVC 507
CN G N TC VC
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC 2815
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 444
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 445 CNKSGHISRNCPDGTKTCYVC 507
CN G N TC VC
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC 3399
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 444
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 445 CNKSGHISRNCPDGTKTCYVC 507
CN G N TC VC
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC 2815
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 444
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 445 CNKSGHISRNCPDGTKTCYVC 507
CN G N TC VC
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC 3399
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 28.3 bits (60), Expect = 5.2
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
Frame = +1
Query: 91 LKCSRIFKTDRNEFKRLLQVQPDRAFRARMHAG---GRGVAGFRFQSAT*EVLQVQPQGH 261
+ C + ++ KRLL P R++ HA GF FQ A L+ Q +
Sbjct: 145 ITCHGYINGEMDDGKRLLGNIPMFPCRSKFHASCMINYNSGGFHFQYAA--RLECQARLL 202
Query: 262 FARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 420
C C CN H ++ A D C C + H+ P GGR+
Sbjct: 203 CPLHC------CNSCNLDHH--KQSAYVGDIAECALCLRAFHLTSCYPSGGRD 247
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +1
Query: 274 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 450
C+E+ D C + C D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 451 KSGHISRNCPDGTKTC 498
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 28.3 bits (60), Expect = 5.2
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
Frame = +1
Query: 91 LKCSRIFKTDRNEFKRLLQVQPDRAFRARMHAG---GRGVAGFRFQSAT*EVLQVQPQGH 261
+ C + ++ KRLL P R++ HA GF FQ A L+ Q +
Sbjct: 145 ITCHGYINGEMDDGKRLLGNIPMFPCRSKFHASCMINYNSGGFHFQYAA--RLECQARLL 202
Query: 262 FARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 420
C C CN H ++ A D C C + H+ P GGR+
Sbjct: 203 CPLHC------CNSCNLDHH--KQSAYVGDIAECALCLRAFHLTSCYPSGGRD 247
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 444
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 445 CNKSGHISRNCPDGTKTCYVC 507
CN G N TC VC
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC 3399
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Frame = +1
Query: 361 CYNCNKTGHIARN--CP-----EGGRESATQT--CYNCNKSGHISRNCPDGTKTCYVC 507
C C+ T H+ R+ CP E + A + C+ C +SGH C +TC C
Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC 370
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +1
Query: 280 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 447
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 448 NKSGHISRNCPDGTKTC 498
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
Score = 27.9 bits (59), Expect = 6.8
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 15/100 (15%)
Frame = +1
Query: 253 QGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE--- 408
+GH+ C C T + A+ C S +E CN K G+ C
Sbjct: 1863 EGHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCAS 1921
Query: 409 ---GGRESATQTCYNCNKSGHI----SRNCPDGTKTCYVC 507
G + + ++C C +G+ SR+C + CY+C
Sbjct: 1922 GFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +1
Query: 280 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 447
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 448 NKSGHISRNCPDGTKTC 498
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
Score = 27.9 bits (59), Expect = 6.8
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 15/100 (15%)
Frame = +1
Query: 253 QGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE--- 408
+GH+ C C T + A+ C S +E CN K G+ C
Sbjct: 1863 EGHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCAS 1921
Query: 409 ---GGRESATQTCYNCNKSGHI----SRNCPDGTKTCYVC 507
G + + ++C C +G+ SR+C + CY+C
Sbjct: 1922 GFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = -1
Query: 460 GRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ 314
G C + S P C P CC C+ A+PG A A+
Sbjct: 13 GTLACFPTSQRSYQYGAPTQQFAACTPQCCGCSQ-AQPGPQPAAAAAAR 60
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -1
Query: 472 CGRCGRTCCSYSRSASQTPAPPRDSSVRC 386
CG+CG+ C+Y++ +++ P + V C
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFC 298
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Frame = -1
Query: 499 STSWCRRDSCGRCGRTCCS-YSRSASQTPAPPRDSSVRCGPSCCS-CNMTARPGSVRTRA 326
S + C+ +C C Y+ A+ TPAP C C S C +P S
Sbjct: 98 SVAQCQPQCQQQCQSQCAPMYNPPATTTPAPVVQCQPMCQQQCQSTCVQQQQPASQCQPQ 157
Query: 325 LCAQCRYIC 299
QC C
Sbjct: 158 CQQQCNVAC 166
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +1
Query: 388 IARNCPEG------GRESATQTCYNCNKSGHISRNCPDGTKTCY 501
++ CP G G S C N +G +S CPDG TCY
Sbjct: 682 LSEACPPGTVVAKDGDGSRLVQCSNPGGNGRVSGGCPDG-YTCY 724
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 457 RTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRA 326
RTCC SA+ P+ S + C P CN AR ++R A
Sbjct: 149 RTCCGCVSSAASGPS---SSLILCFPGGRRCNTHARTEALRGTA 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,333,844
Number of Sequences: 27780
Number of extensions: 299922
Number of successful extensions: 1373
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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