Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0245
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    23   1.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   6.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   6.9  

>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 630 KSLXFDCNVGNIKLRYENVIKIWLYG 553
           + L  DCN+G      +  + +++YG
Sbjct: 66  RRLEVDCNIGGYDFPKDTFLSLFIYG 91


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 24  VSFNFLYPVNSSRASERT--HTLFFF*YLILAYGP 122
           + F+F Y   +S+ ++    +TLFF  Y+ L  GP
Sbjct: 268 IVFSFCYCYYNSKMTKDGVYNTLFFIVYVSLLLGP 302


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 497 IDTNHTHHTKKGXNVNGTKPYSQILITFSYLSFIFP 604
           IDT  TH  K          Y ++L+TF++   +FP
Sbjct: 9   IDTRSTHSMKNFK-------YLKVLVTFAHFICLFP 37


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 320 YNVLRIQWSLTANHLNLTCMKKQYN 394
           YN  R+  S   N LNLT  K + N
Sbjct: 130 YNESRVMMSPPGNVLNLTMPKYEPN 154


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 320 YNVLRIQWSLTANHLNLTCMKKQYN 394
           YN  R+  S   N LNLT  K + N
Sbjct: 130 YNESRVMMSPPGNVLNLTMPKYEPN 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,057
Number of Sequences: 336
Number of extensions: 2871
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)