BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0245
(666 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC113617-1|AAI13618.1| 757|Homo sapiens relaxin/insulin-like fa... 32 1.6
BC112142-1|AAI12143.1| 757|Homo sapiens leucine-rich repeat-con... 32 1.6
AY899850-1|AAX85198.1| 724|Homo sapiens LGR7.10 protein. 32 1.6
AY899849-1|AAX85197.1| 709|Homo sapiens LGR7.2 protein. 32 1.6
AF190500-1|AAG17167.1| 757|Homo sapiens leucine-rich repeat-con... 32 1.6
AC108017-1|AAY41039.1| 260|Homo sapiens unknown protein. 32 1.6
AB208943-1|BAD92180.1| 627|Homo sapiens leucine-rich repeat-con... 32 1.6
>BC113617-1|AAI13618.1| 757|Homo sapiens relaxin/insulin-like
family peptide receptor 1 protein.
Length = 757
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 302 FHEPAMYNVL-RIQWSLTA-NHLNLTCMKKQYNVIFQLLFIMLSSLATRL*TRTIAQHCN 475
F +P ++ L R++W + NHL+ Y + +L ++++++ TRL + + QH
Sbjct: 188 FLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMP 247
Query: 476 S*LI*IQIDTNHTHHTK 526
L + ++ NH H+ +
Sbjct: 248 R-LHWLDLEGNHIHNLR 263
>BC112142-1|AAI12143.1| 757|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 7 protein.
Length = 757
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 302 FHEPAMYNVL-RIQWSLTA-NHLNLTCMKKQYNVIFQLLFIMLSSLATRL*TRTIAQHCN 475
F +P ++ L R++W + NHL+ Y + +L ++++++ TRL + + QH
Sbjct: 188 FLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMP 247
Query: 476 S*LI*IQIDTNHTHHTK 526
L + ++ NH H+ +
Sbjct: 248 R-LHWLDLEGNHIHNLR 263
>AY899850-1|AAX85198.1| 724|Homo sapiens LGR7.10 protein.
Length = 724
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 302 FHEPAMYNVL-RIQWSLTA-NHLNLTCMKKQYNVIFQLLFIMLSSLATRL*TRTIAQHCN 475
F +P ++ L R++W + NHL+ Y + +L ++++++ TRL + + QH
Sbjct: 155 FLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMP 214
Query: 476 S*LI*IQIDTNHTHHTK 526
L + ++ NH H+ +
Sbjct: 215 R-LHWLDLEGNHIHNLR 230
>AY899849-1|AAX85197.1| 709|Homo sapiens LGR7.2 protein.
Length = 709
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 302 FHEPAMYNVL-RIQWSLTA-NHLNLTCMKKQYNVIFQLLFIMLSSLATRL*TRTIAQHCN 475
F +P ++ L R++W + NHL+ Y + +L ++++++ TRL + + QH
Sbjct: 188 FLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMP 247
Query: 476 S*LI*IQIDTNHTHHTK 526
L + ++ NH H+ +
Sbjct: 248 R-LHWLDLEGNHIHNLR 263
>AF190500-1|AAG17167.1| 757|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 7 protein.
Length = 757
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 302 FHEPAMYNVL-RIQWSLTA-NHLNLTCMKKQYNVIFQLLFIMLSSLATRL*TRTIAQHCN 475
F +P ++ L R++W + NHL+ Y + +L ++++++ TRL + + QH
Sbjct: 188 FLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMP 247
Query: 476 S*LI*IQIDTNHTHHTK 526
L + ++ NH H+ +
Sbjct: 248 R-LHWLDLEGNHIHNLR 263
>AC108017-1|AAY41039.1| 260|Homo sapiens unknown protein.
Length = 260
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 302 FHEPAMYNVL-RIQWSLTA-NHLNLTCMKKQYNVIFQLLFIMLSSLATRL*TRTIAQHCN 475
F +P ++ L R++W + NHL+ Y + +L ++++++ TRL + + QH
Sbjct: 125 FLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMP 184
Query: 476 S*LI*IQIDTNHTHHTK 526
L + ++ NH H+ +
Sbjct: 185 R-LHWLDLEGNHIHNLR 200
>AB208943-1|BAD92180.1| 627|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 7 variant
protein.
Length = 627
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 302 FHEPAMYNVL-RIQWSLTA-NHLNLTCMKKQYNVIFQLLFIMLSSLATRL*TRTIAQHCN 475
F +P ++ L R++W + NHL+ Y + +L ++++++ TRL + + QH
Sbjct: 58 FLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMP 117
Query: 476 S*LI*IQIDTNHTHHTK 526
L + ++ NH H+ +
Sbjct: 118 R-LHWLDLEGNHIHNLR 133
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,711,353
Number of Sequences: 237096
Number of extensions: 1496022
Number of successful extensions: 2038
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2038
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -