Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0244
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            27   0.62 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            27   0.62 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   5.8  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 26.6 bits (56), Expect = 0.62
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 483  SSLLSLYGNLRVSVLVSVDLTVYLLIDNDAYIV 385
            S L  LY N+   +  ++D + + ++ NDAYIV
Sbjct: 1042 SELQELYRNITSQIPFAIDPSKFGILVNDAYIV 1074


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 26.6 bits (56), Expect = 0.62
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 483  SSLLSLYGNLRVSVLVSVDLTVYLLIDNDAYIV 385
            S L  LY N+   +  ++D + + ++ NDAYIV
Sbjct: 1043 SELQELYRNITSQIPFAIDPSKFGILVNDAYIV 1075


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +3

Query: 414  NRQLGRRLLKHSPEGFHIKKVRKK 485
            N+ + R LL+H P+G   K+V+K+
Sbjct: 938  NKLIVRELLRHYPDGLQ-KEVKKE 960


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,358
Number of Sequences: 2352
Number of extensions: 9725
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)