Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0243
         (769 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_53723| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.4  
SB_42189| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.4  
SB_25778| Best HMM Match : COX17 (HMM E-Value=1.1)                     30   2.4  
SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11)          30   2.4  
SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.4  
SB_21408| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.4  
SB_50051| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_46018| Best HMM Match : I-set (HMM E-Value=0.025)                   28   9.5  
SB_22057| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  

>SB_53723| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 709

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 755 EDLATALGLALMEGISILPQD*TYYNYYPIF 663
           ++L   LG+AL+ GI+ LPQ   Y++  P+F
Sbjct: 138 DELRMFLGVALVMGINSLPQQALYWSQNPLF 168


>SB_42189| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 493

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 755 EDLATALGLALMEGISILPQD*TYYNYYPIF 663
           ++L   LG+AL+ GI+ LPQ   Y++  P+F
Sbjct: 176 DELRMFLGVALVMGINSLPQQALYWSQNPLF 206


>SB_25778| Best HMM Match : COX17 (HMM E-Value=1.1)
          Length = 567

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 755 EDLATALGLALMEGISILPQD*TYYNYYPIF 663
           ++L   LG+AL+ GI+ LPQ   Y++  P+F
Sbjct: 138 DELRMFLGVALVMGINSLPQQALYWSQNPLF 168


>SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11)
          Length = 1170

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 755 EDLATALGLALMEGISILPQD*TYYNYYPIF 663
           ++L   LG+AL+ GI+ LPQ   Y++  P+F
Sbjct: 41  DELRMFLGVALVMGINSLPQQALYWSQNPLF 71


>SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1995

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 755  EDLATALGLALMEGISILPQD*TYYNYYPIF 663
            ++L   LG+AL+ GI+ LPQ   Y++  P+F
Sbjct: 1920 DELRMFLGVALVMGINSLPQQALYWSQNPLF 1950


>SB_21408| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 395

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 755 EDLATALGLALMEGISILPQD*TYYNYYPIF 663
           ++L   LG+AL+ GI+ LPQ   Y++  P+F
Sbjct: 101 DELRMFLGVALVMGINSLPQQALYWSQNPLF 131


>SB_50051| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 315

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 755 EDLATALGLALMEGISILPQD*TYYNYYPIF 663
           ++L   LG+AL+ GI+ LPQ   Y++  P+F
Sbjct: 138 DELRMFLGVALVIGINSLPQQALYWSQNPLF 168


>SB_46018| Best HMM Match : I-set (HMM E-Value=0.025)
          Length = 1122

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 567 ECTMRKLTPTTSTNAQEVCRYYMCEIFYN*QVFTVTLVINC 445
           E T+ +++ T     +E  RYY C I +  Q+   TL++ C
Sbjct: 352 EYTVTEVSTTAGAYQEENARYYPCLIMF--QIVLTTLLVAC 390


>SB_22057| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 402

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 764 LWTEDLATALGLALMEGISILPQD*TYYN 678
           L T D+A A+      G+SI+PQ   YYN
Sbjct: 271 LHTSDIARAMDEWTKAGVSIIPQPREYYN 299


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,956,988
Number of Sequences: 59808
Number of extensions: 376229
Number of successful extensions: 647
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)