Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0241
         (647 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4IS87 Cluster: Putative phage protein; n=1; Geobacillu...    37   0.37 
UniRef50_A7SLC1 Cluster: Predicted protein; n=1; Nematostella ve...    34   3.4  
UniRef50_A3LZH4 Cluster: Predicted protein; n=3; Saccharomycetac...    34   3.4  
UniRef50_Q73JC2 Cluster: Membrane protein, putative; n=1; Trepon...    33   4.5  
UniRef50_Q9BPQ8 Cluster: Integrin alpha Hr1 precursor; n=1; Halo...    33   7.9  

>UniRef50_A4IS87 Cluster: Putative phage protein; n=1; Geobacillus
           thermodenitrificans NG80-2|Rep: Putative phage protein -
           Geobacillus thermodenitrificans (strain NG80-2)
          Length = 117

 Score = 37.1 bits (82), Expect = 0.37
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -3

Query: 378 FAYCLNVSKSYCYWIWTLEWRPPPVLSTDFVL 283
           + YC++V+ +YC W+  +EW  PPV    F L
Sbjct: 20  WVYCVSVNSAYCGWLGYVEWVRPPVGMVQFTL 51


>UniRef50_A7SLC1 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 193

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
 Frame = -3

Query: 483 EHCGTCYQSKKNLYFLILNFH-----FKCGICLLMFSFQC 379
           E CG C+ S   L   I + H     FKC  C L+FS+QC
Sbjct: 60  EKCGKCFSSTSYLKLHIKSVHNEKKLFKCDQCNLLFSWQC 99


>UniRef50_A3LZH4 Cluster: Predicted protein; n=3;
           Saccharomycetaceae|Rep: Predicted protein - Pichia
           stipitis (Yeast)
          Length = 575

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
 Frame = +1

Query: 136 ISVQIYR--PQVDNQYYNVERVSWQKKGREIEKTMG*RYN*IIGKD 267
           +S+ IY+  P +D+ Y N++R SW+K  + ++  +  +Y  + GKD
Sbjct: 286 MSLYIYKNLPVIDSSYCNIKRTSWKKTSKFLKAMVKLKYLDVKGKD 331


>UniRef50_Q73JC2 Cluster: Membrane protein, putative; n=1; Treponema
           denticola|Rep: Membrane protein, putative - Treponema
           denticola
          Length = 257

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -3

Query: 405 CLLMFSFQCFAYCLNVSKSYCYWIWTLEWRPPPVLSTDFVLANSLPVLPY 256
           CLL++S     Y ++V   YC++ WTL +    +L     L   LPV P+
Sbjct: 58  CLLIYSL----YTMSVGVFYCFFAWTLWYSNTYILQGKLSLVLKLPVNPF 103


>UniRef50_Q9BPQ8 Cluster: Integrin alpha Hr1 precursor; n=1;
           Halocynthia roretzi|Rep: Integrin alpha Hr1 precursor -
           Halocynthia roretzi (Sea squirt)
          Length = 1332

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +1

Query: 163 VDNQYYNVE--RVSWQKKGREIEKTMG*RYN*IIGKDRQTIGKDKISGKD 306
           +DN Y N    +V +  +GR IE  +G  YN  +   +Q++G+ ++  +D
Sbjct: 725 IDNNYVNCTSVQVCFTAQGRSIESVIGLTYNLTLDSGKQSLGEKRLEFRD 774


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,744,249
Number of Sequences: 1657284
Number of extensions: 12529214
Number of successful extensions: 30838
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30788
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)