Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0241
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.7  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 536  EKRTGHRAPTSYLP 495
            +K+TGH AP  Y P
Sbjct: 2520 DKQTGHVAPLYYYP 2533


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 389  LNINKQIPHLKWKLRIR 439
            L +NK   H+KW L +R
Sbjct: 1286 LQLNKDQIHVKWPLGVR 1302


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 389  LNINKQIPHLKWKLRIR 439
            L +NK   H+KW L +R
Sbjct: 1286 LQLNKDQIHVKWPLGVR 1302


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +2

Query: 134 IFQFRYTDPRWTINTTMW 187
           +F+    D  W++N  MW
Sbjct: 393 VFEELLLDADWSVNAGMW 410


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 260 PIIQLYRQPIVFSISLPFF 204
           P  +LY+  +VFS ++ FF
Sbjct: 28  PTYRLYKIFVVFSFAVTFF 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,817
Number of Sequences: 336
Number of extensions: 3521
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)