Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0240
         (745 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008890-1|AAH08890.1|  157|Homo sapiens UXT protein protein.          58   4e-08
BC000720-1|AAH00720.1|  157|Homo sapiens UXT protein protein.          58   4e-08
AL009172-6|CAI42448.1|  157|Homo sapiens ubiquitously-expressed ...    58   4e-08
AL009172-5|CAI42447.1|  169|Homo sapiens ubiquitously-expressed ...    58   4e-08
AF092737-1|AAD28698.1|  157|Homo sapiens ubiquitously expressed ...    58   4e-08
AL356738-8|CAI41469.1|  197|Homo sapiens von Hippel-Lindau bindi...    42   0.002
Y17394-1|CAA76761.1|  197|Homo sapiens prefoldin subunit 3 protein.    42   0.003
U96759-1|AAC23907.1|  160|Homo sapiens von Hippel-Lindau binding...    42   0.003
U56833-1|AAC50617.1|  166|Homo sapiens VHL binding protein-1 pro...    42   0.003
CR541932-1|CAG46730.1|  160|Homo sapiens VBP1 protein.                 42   0.003
BT019604-1|AAV38411.1|  197|Homo sapiens von Hippel-Lindau bindi...    42   0.003
BC046094-1|AAH46094.1|  197|Homo sapiens von Hippel-Lindau bindi...    42   0.003

>BC008890-1|AAH08890.1|  157|Homo sapiens UXT protein protein.
          Length = 157

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 30/101 (29%), Positives = 59/101 (58%)
 Frame = +2

Query: 188 DTVTRYENFINEVLKEDLRELERN*SFFNNEVSDLIQQKHTLKVLTNKNIHPTGFKTQVN 367
           + V RYE FI++VL+ DLR++  +      +++  +Q ++ ++ L     H   +  QV+
Sbjct: 15  EKVLRYETFISDVLQRDLRKVLDHRDKVYEQLAKYLQLRNVIERLQEAK-HSELYM-QVD 72

Query: 368 VGCNFFMEASVSKTDTLLVNIGLNHYIEFKLSEANRFLEAR 490
           +GCNFF++  V  T  + V +G   ++E  L+EA +F++ +
Sbjct: 73  LGCNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRK 113


>BC000720-1|AAH00720.1|  157|Homo sapiens UXT protein protein.
          Length = 157

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 30/101 (29%), Positives = 59/101 (58%)
 Frame = +2

Query: 188 DTVTRYENFINEVLKEDLRELERN*SFFNNEVSDLIQQKHTLKVLTNKNIHPTGFKTQVN 367
           + V RYE FI++VL+ DLR++  +      +++  +Q ++ ++ L     H   +  QV+
Sbjct: 15  EKVLRYETFISDVLQRDLRKVLDHRDKVYEQLAKYLQLRNVIERLQEAK-HSELYM-QVD 72

Query: 368 VGCNFFMEASVSKTDTLLVNIGLNHYIEFKLSEANRFLEAR 490
           +GCNFF++  V  T  + V +G   ++E  L+EA +F++ +
Sbjct: 73  LGCNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRK 113


>AL009172-6|CAI42448.1|  157|Homo sapiens ubiquitously-expressed
           transcript protein.
          Length = 157

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 30/101 (29%), Positives = 59/101 (58%)
 Frame = +2

Query: 188 DTVTRYENFINEVLKEDLRELERN*SFFNNEVSDLIQQKHTLKVLTNKNIHPTGFKTQVN 367
           + V RYE FI++VL+ DLR++  +      +++  +Q ++ ++ L     H   +  QV+
Sbjct: 15  EKVLRYETFISDVLQRDLRKVLDHRDKVYEQLAKYLQLRNVIERLQEAK-HSELYM-QVD 72

Query: 368 VGCNFFMEASVSKTDTLLVNIGLNHYIEFKLSEANRFLEAR 490
           +GCNFF++  V  T  + V +G   ++E  L+EA +F++ +
Sbjct: 73  LGCNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRK 113


>AL009172-5|CAI42447.1|  169|Homo sapiens ubiquitously-expressed
           transcript protein.
          Length = 169

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 30/101 (29%), Positives = 59/101 (58%)
 Frame = +2

Query: 188 DTVTRYENFINEVLKEDLRELERN*SFFNNEVSDLIQQKHTLKVLTNKNIHPTGFKTQVN 367
           + V RYE FI++VL+ DLR++  +      +++  +Q ++ ++ L     H   +  QV+
Sbjct: 27  EKVLRYETFISDVLQRDLRKVLDHRDKVYEQLAKYLQLRNVIERLQEAK-HSELYM-QVD 84

Query: 368 VGCNFFMEASVSKTDTLLVNIGLNHYIEFKLSEANRFLEAR 490
           +GCNFF++  V  T  + V +G   ++E  L+EA +F++ +
Sbjct: 85  LGCNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRK 125


>AF092737-1|AAD28698.1|  157|Homo sapiens ubiquitously expressed
           transcript protein.
          Length = 157

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 30/101 (29%), Positives = 59/101 (58%)
 Frame = +2

Query: 188 DTVTRYENFINEVLKEDLRELERN*SFFNNEVSDLIQQKHTLKVLTNKNIHPTGFKTQVN 367
           + V RYE FI++VL+ DLR++  +      +++  +Q ++ ++ L     H   +  QV+
Sbjct: 15  EKVLRYETFISDVLQRDLRKVLDHRDKVYEQLAKYLQLRNVIERLQEAK-HSELYM-QVD 72

Query: 368 VGCNFFMEASVSKTDTLLVNIGLNHYIEFKLSEANRFLEAR 490
           +GCNFF++  V  T  + V +G   ++E  L+EA +F++ +
Sbjct: 73  LGCNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRK 113


>AL356738-8|CAI41469.1|  197|Homo sapiens von Hippel-Lindau binding
           protein 1 protein.
          Length = 197

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 21/79 (26%), Positives = 39/79 (49%)
 Frame = +2

Query: 278 EVSDLIQQKHTLKVLTNKNIHPTGFKTQVNVGCNFFMEASVSKTDTLLVNIGLNHYIEFK 457
           ++ ++ Q    LK +  K       +T+  +  N + +ASV  TD + + +G N  +E+ 
Sbjct: 77  QIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKMCLWLGANVMLEYD 136

Query: 458 LSEANRFLEARIKSYEKNL 514
           + EA   LE  + +  KNL
Sbjct: 137 IDEAQALLEKNLSTATKNL 155


>Y17394-1|CAA76761.1|  197|Homo sapiens prefoldin subunit 3 protein.
          Length = 197

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 21/79 (26%), Positives = 39/79 (49%)
 Frame = +2

Query: 278 EVSDLIQQKHTLKVLTNKNIHPTGFKTQVNVGCNFFMEASVSKTDTLLVNIGLNHYIEFK 457
           ++ ++ Q    LK +  K       +T+  +  N + +ASV  TD + + +G N  +E+ 
Sbjct: 77  QIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYD 136

Query: 458 LSEANRFLEARIKSYEKNL 514
           + EA   LE  + +  KNL
Sbjct: 137 IDEAQALLEKNLSTATKNL 155


>U96759-1|AAC23907.1|  160|Homo sapiens von Hippel-Lindau binding
           protein protein.
          Length = 160

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 21/79 (26%), Positives = 39/79 (49%)
 Frame = +2

Query: 278 EVSDLIQQKHTLKVLTNKNIHPTGFKTQVNVGCNFFMEASVSKTDTLLVNIGLNHYIEFK 457
           ++ ++ Q    LK +  K       +T+  +  N + +ASV  TD + + +G N  +E+ 
Sbjct: 40  QIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYD 99

Query: 458 LSEANRFLEARIKSYEKNL 514
           + EA   LE  + +  KNL
Sbjct: 100 IDEAQALLEKNLSTATKNL 118


>U56833-1|AAC50617.1|  166|Homo sapiens VHL binding protein-1
           protein.
          Length = 166

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 21/79 (26%), Positives = 39/79 (49%)
 Frame = +2

Query: 278 EVSDLIQQKHTLKVLTNKNIHPTGFKTQVNVGCNFFMEASVSKTDTLLVNIGLNHYIEFK 457
           ++ ++ Q    LK +  K       +T+  +  N + +ASV  TD + + +G N  +E+ 
Sbjct: 46  QIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYD 105

Query: 458 LSEANRFLEARIKSYEKNL 514
           + EA   LE  + +  KNL
Sbjct: 106 IDEAQALLEKNLSTATKNL 124


>CR541932-1|CAG46730.1|  160|Homo sapiens VBP1 protein.
          Length = 160

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 21/79 (26%), Positives = 39/79 (49%)
 Frame = +2

Query: 278 EVSDLIQQKHTLKVLTNKNIHPTGFKTQVNVGCNFFMEASVSKTDTLLVNIGLNHYIEFK 457
           ++ ++ Q    LK +  K       +T+  +  N + +ASV  TD + + +G N  +E+ 
Sbjct: 40  QIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYD 99

Query: 458 LSEANRFLEARIKSYEKNL 514
           + EA   LE  + +  KNL
Sbjct: 100 IDEAQALLEKNLSTATKNL 118


>BT019604-1|AAV38411.1|  197|Homo sapiens von Hippel-Lindau binding
           protein 1 protein.
          Length = 197

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 21/79 (26%), Positives = 39/79 (49%)
 Frame = +2

Query: 278 EVSDLIQQKHTLKVLTNKNIHPTGFKTQVNVGCNFFMEASVSKTDTLLVNIGLNHYIEFK 457
           ++ ++ Q    LK +  K       +T+  +  N + +ASV  TD + + +G N  +E+ 
Sbjct: 77  QIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYD 136

Query: 458 LSEANRFLEARIKSYEKNL 514
           + EA   LE  + +  KNL
Sbjct: 137 IDEAQALLEKNLSTATKNL 155


>BC046094-1|AAH46094.1|  197|Homo sapiens von Hippel-Lindau binding
           protein 1 protein.
          Length = 197

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 21/79 (26%), Positives = 39/79 (49%)
 Frame = +2

Query: 278 EVSDLIQQKHTLKVLTNKNIHPTGFKTQVNVGCNFFMEASVSKTDTLLVNIGLNHYIEFK 457
           ++ ++ Q    LK +  K       +T+  +  N + +ASV  TD + + +G N  +E+ 
Sbjct: 77  QIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYD 136

Query: 458 LSEANRFLEARIKSYEKNL 514
           + EA   LE  + +  KNL
Sbjct: 137 IDEAQALLEKNLSTATKNL 155


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,895,663
Number of Sequences: 237096
Number of extensions: 1684367
Number of successful extensions: 2948
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2940
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)