Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0240
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99267-1|CAB16465.1|  732|Caenorhabditis elegans C33A12.12 protein.    28   6.1  
Z68493-14|CAA92801.1|  732|Caenorhabditis elegans Hypothetical p...    28   6.1  
AL033537-1|CAA22147.1|  732|Caenorhabditis elegans Hypothetical ...    28   6.1  

>Z99267-1|CAB16465.1|  732|Caenorhabditis elegans C33A12.12 protein.
          Length = 732

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -1

Query: 184 YICLCHFKVINFRSTYVRIFKFNIDLFN-FTVT 89
           Y+C    ++ N + TY R F+FN + F  F+VT
Sbjct: 664 YVCFSDSQIHNVQVTYPRAFEFNCNSFMLFSVT 696


>Z68493-14|CAA92801.1|  732|Caenorhabditis elegans Hypothetical
           protein C33A12.12 protein.
          Length = 732

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -1

Query: 184 YICLCHFKVINFRSTYVRIFKFNIDLFN-FTVT 89
           Y+C    ++ N + TY R F+FN + F  F+VT
Sbjct: 664 YVCFSDSQIHNVQVTYPRAFEFNCNSFMLFSVT 696


>AL033537-1|CAA22147.1|  732|Caenorhabditis elegans Hypothetical
           protein C33A12.12 protein.
          Length = 732

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -1

Query: 184 YICLCHFKVINFRSTYVRIFKFNIDLFN-FTVT 89
           Y+C    ++ N + TY R F+FN + F  F+VT
Sbjct: 664 YVCFSDSQIHNVQVTYPRAFEFNCNSFMLFSVT 696


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,294,196
Number of Sequences: 27780
Number of extensions: 298029
Number of successful extensions: 732
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)