Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0236
         (805 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.53 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.8  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.7  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 255 KMAQVYPHPAPEGCTSASSESAPSDQPIYPDTG 353
           ++  VYP+     C   + E++ SD P +P  G
Sbjct: 187 QLMDVYPNNDGTKCLVVTDEASISDAPFFPHRG 219


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 550 KCAFFFSTSLVTVFCRIG 497
           KC  FF T+LV  +C+ G
Sbjct: 63  KCLAFFCTALVIFYCQEG 80


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 550 KCAFFFSTSLVTVFCRIG 497
           KC  FF T+LV  +C+ G
Sbjct: 296 KCLAFFCTALVIFYCQEG 313


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 550 KCAFFFSTSLVTVFCRIG 497
           KC  FF T+LV  +C+ G
Sbjct: 296 KCLAFFCTALVIFYCQEG 313


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +3

Query: 270 YPHP--APEGCTSASSESAPSDQPIYPDTG 353
           YP+P  +PE    A+S   PS  P+ P  G
Sbjct: 172 YPYPILSPEMSQVAASWHTPSMYPLSPGAG 201


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +3

Query: 270 YPHP--APEGCTSASSESAPSDQPIYPDTG 353
           YP+P  +PE    A+S   PS  P+ P  G
Sbjct: 64  YPYPILSPEMSQVAASWHTPSMYPLSPGAG 93


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +3

Query: 222 AFSQLVT-CPDLKMAQVYPHPAPEGCTS 302
           AF+ + T  P   M ++YP P P   TS
Sbjct: 306 AFNSVATPTPTSVMTELYPSPVPGHSTS 333


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 303  ASSESAPSDQPIYPD 347
            ASS  APS  P+ PD
Sbjct: 2288 ASSTMAPSTTPMVPD 2302


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 568 IMSDDHKCAFFFSTSLVTVFCRIGWCWASLV 476
           I    H C   +ST     +C + + W+S V
Sbjct: 309 IFDSIHLCDVCYSTIGTVSWCELNFDWSSQV 339


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,191
Number of Sequences: 336
Number of extensions: 3391
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)